docs: update PyPI setup report with commit reference

Author: LittleCoinCoin

__reports__/repo-setup/01-pypi_and_security_fixes.md

@@ -36,7 +36,9 @@ Addressing two critical setup improvements:
 - [x] Create comprehensive PyPI setup guide
 - [x] Update CONTRIBUTING.md with release process
 - [x] Update progress report
-- [ ] Commit all changes with conventional commits
+- [x] Commit all changes with conventional commits
+
+**Commit**: `3c0af02` - feat(ci): add PyPI publishing with Trusted Publishing and update dependencies
 
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