From 409e0c14bce7e622c4204b242575a36256a7bb09 Mon Sep 17 00:00:00 2001
From: Simarpreet-Kaur-Bhurji <sbhurji@ebi.ac.uk>
Date: Mon, 11 Aug 2025 15:20:00 +0100
Subject: [PATCH] Requesting minimum set of config updates for big dataset

---
 FastOMA.nf | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/FastOMA.nf b/FastOMA.nf
index a04dbb3..b9d5e22 100644
--- a/FastOMA.nf
+++ b/FastOMA.nf
@@ -217,7 +217,7 @@ process omamer_run{
 
 
 process infer_roothogs{
-  label "process_single"
+  label "process_medium"
   publishDir = [
     path: params.temp_output,
     enabled: params.debug_enabled,
@@ -410,6 +410,7 @@ process hog_rest{
 
 
 process collect_subhogs{
+  label "process_high"
   publishDir params.output_folder, mode: 'copy'
   input:
     path pickles, stageAs: "pickle_folders/?"
@@ -455,6 +456,7 @@ process extract_pairwise_ortholog_relations {
 
 
 process fastoma_report {
+  label "process_medium"
   publishDir params.output_folder, mode: 'copy'
   input:
     path notebook