Fix Z projection jobs to use the right CSV

bethac07 · web-flow · commit 2320eeb601b2 · 2021-11-22T16:23:18.000-05:00
diff --git a/run_batch_general.py b/run_batch_general.py
@@ -64,7 +64,7 @@ def MakeZprojJobs(batch=False):
                                         'output': zprojoutpath,
                                         'output_structure': zprojoutputstructure,
                                         'input': inputpath,
-                                        'data_file': posixpath.join(datafilepath,tozproj,csvname)
+                                        'data_file': posixpath.join(datafilepath,tozproj,csv_unprojected_name)
                                         }
                     else:
                         templateMessage_zproj = {'Metadata': 'Metadata_Plate='+tozproj+',Metadata_Well='+eachrow+'%02d' %eachcol+',Metadata_Site='+str(eachsite),

Original file line number	Diff line number	Diff line change
`@@ -64,7 +64,7 @@ def MakeZprojJobs(batch=False):`
`64`	`64`	`'output': zprojoutpath,`
`65`	`65`	`'output_structure': zprojoutputstructure,`
`66`	`66`	`'input': inputpath,`
`67`		`- 'data_file': posixpath.join(datafilepath,tozproj,csvname)`
	`67`	`+ 'data_file': posixpath.join(datafilepath,tozproj,csv_unprojected_name)`
`68`	`68`	`}`
`69`	`69`	`else:`
`70`	`70`	`templateMessage_zproj = {'Metadata': 'Metadata_Plate='+tozproj+',Metadata_Well='+eachrow+'%02d' %eachcol+',Metadata_Site='+str(eachsite),`