diff --git a/scripts/update-pkgs-2021.12.sh b/scripts/update-pkgs-EESSI-2021.12_2022-09-07.sh similarity index 100% rename from scripts/update-pkgs-2021.12.sh rename to scripts/update-pkgs-EESSI-2021.12_2022-09-07.sh diff --git a/scripts/update-pkgs-EESSI-2021.12_2023-01-31.sh b/scripts/update-pkgs-EESSI-2021.12_2023-01-31.sh new file mode 100755 index 00000000..7d8e2f34 --- /dev/null +++ b/scripts/update-pkgs-EESSI-2021.12_2023-01-31.sh @@ -0,0 +1,76 @@ +#!/usr/bin/env bash + +set -e + +mytmpdir=$(mktemp -d) + +if [ -z "$EPREFIX" ]; then + # this assumes we're running in a Gentoo Prefix environment + EPREFIX=$(dirname $(dirname $SHELL)) +fi +echo "EPREFIX=${EPREFIX}" + +# collect list of installed packages before updating packages +list_installed_pkgs_pre_update=${mytmpdir}/installed-pkgs-pre-update.txt +echo "Collecting list of installed packages to ${list_installed_pkgs_pre_update}..." +qlist -IRv | sort | tee ${list_installed_pkgs_pre_update} + +# update checkout of gentoo repository to sufficiently recent commit +# this is required because we pin to a specific commit when bootstrapping the compat layer +# see gentoo_git_commit in ansible/playbooks/roles/compatibility_layer/defaults/main.yml; + +# https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=5507d83c30321cbb24626eb2f2c445368020d65e (2023-01-31) +gentoo_commit='5507d83c30321cbb24626eb2f2c445368020d65e' +echo "Updating $EPREFIX/var/db/repos/gentoo to recent commit (${gentoo_commit})..." +cd $EPREFIX/var/db/repos/gentoo +time git fetch origin +echo "Checking out ${gentoo_commit} in ${PWD}..." +time git checkout ${gentoo_commit} +cd - + +# unmask glibc 2.34 so we can update to it (glibc <2.36 is masked via $EPREFIX/var/db/repos/gentoo/profiles/package.mask) +echo '# unmask glibc 2.34 (glibc < 2.36 is masked via $EPREFIX/var/db/repos/gentoo/profiles/package.mask)' >> ${EPREFIX}/etc/portage/package.unmask +echo '=sys-libs/glibc-2.34-r14' >> ${EPREFIX}/etc/portage/package.unmask +# update glibc due to https://glsa.gentoo.org/glsa/202208-24 +emerge --update --oneshot --verbose '=sys-libs/glibc-2.34-r14' # was sys-libs/glibc-2.33-r7 + +# update binutils due to https://glsa.gentoo.org/glsa/202208-30 +emerge --update --oneshot --verbose '=sys-devel/binutils-2.38-r2' # was sys-devel/binutils-2.37_p1-r1 + +# update openssl due to https://glsa.gentoo.org/glsa/202210-02 +emerge --update --oneshot --verbose '=dev-libs/openssl-1.1.1q' # was dev-libs/openssl-1.1.1l-r1 + +# update libxml2 due to https://glsa.gentoo.org/glsa/202210-03 +emerge --update --oneshot --verbose '=dev-libs/libxml2-2.10.3-r1' # was dev-libs/libxml2-2.9.12-r5 + +# update gzip due to https://glsa.gentoo.org/glsa/202209-01 +emerge --update --oneshot --verbose '=app-arch/gzip-1.12-r4' # was app-arch/gzip-1.11 + +# update libksba due to https://glsa.gentoo.org/glsa/202212-07 + https://glsa.gentoo.org/glsa/202210-23 +emerge --update --oneshot --verbose '=dev-libs/libksba-1.6.3' # was dev-libs/libksba-1.6.0 + +# update libgcrypt due to https://glsa.gentoo.org/glsa/202210-13 +emerge --update --oneshot --verbose '=dev-libs/libgcrypt-1.9.4-r2' # was dev-libs/libgcrypt-1.8.8 + +# update expat due to https://glsa.gentoo.org/glsa/202209-24 + https://glsa.gentoo.org/glsa/202210-38 +emerge --update --oneshot --verbose '=dev-libs/expat-2.5.0' # was dev-libs/expat-2.4.1 + +# update sqlite due to https://glsa.gentoo.org/glsa/202210-40 +emerge --update --oneshot --verbose '=dev-db/sqlite-3.40.1' # dev-db/sqlite-3.35.5 + +# update curl due to https://glsa.gentoo.org/glsa/202212-01 +emerge --update --oneshot --verbose '=net-misc/curl-7.86.0-r3' # was net-misc/curl-7.80.0 + +# update zlib due to https://glsa.gentoo.org/glsa/202210-42 +emerge --update --oneshot --verbose '=sys-libs/zlib-1.2.13-r1' # was sys-libs/zlib-1.2.11-r4 + +# collect list of installed packages after updating packages +list_installed_pkgs_post_update=${mytmpdir}/installed-pkgs-post-update.txt +echo "Collecting list of installed packages to ${list_installed_pkgs_post_update}..." +qlist -IRv | sort | tee ${list_installed_pkgs_post_update} + +echo +echo "diff in installed packages:" +diff -u ${list_installed_pkgs_pre_update} ${list_installed_pkgs_post_update} + +rm -rf ${mytmpdir}