From b93cff296b4fdb765d700f9126eee2a5440fafa6 Mon Sep 17 00:00:00 2001
From: Diego Alonso Alvarez <d.alonso-alvarez@imperial.ac.uk>
Date: Wed, 12 Nov 2025 09:58:42 +0000
Subject: [PATCH] :bug: Update settings ton override graphs

---
 src/cli.rs | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/src/cli.rs b/src/cli.rs
index d294be3cb..81eb01fab 100644
--- a/src/cli.rs
+++ b/src/cli.rs
@@ -211,12 +211,16 @@ pub fn handle_save_graphs_command(
     settings: Option<Settings>,
 ) -> Result<()> {
     // Load program settings, if not provided
-    let settings = if let Some(settings) = settings {
+    let mut settings = if let Some(settings) = settings {
         settings
     } else {
         Settings::load().context("Failed to load settings.")?
     };
 
+    if opts.overwrite {
+        settings.overwrite = true;
+    }
+
     // Get path to output folder
     let pathbuf: PathBuf;
     let output_path = if let Some(p) = opts.output_dir.as_deref() {