diff --git a/docs/installations/installation-on-gnu-linux.md b/docs/installations/installation-on-gnu-linux.md index b9fcc984..a96332a0 100644 --- a/docs/installations/installation-on-gnu-linux.md +++ b/docs/installations/installation-on-gnu-linux.md @@ -1,6 +1,30 @@ Installation on GNU/Linux ========================= +## Install via Conda + +Use conda or bioconda to install OpenMS. + +1. Follow the instructions to [install conda](https://docs.conda.io/projects/conda/en/latest/user-guide/install/macos.html). +2. Install OpenMS using conda: + `conda install -c openms openms` +3. Other OpenMS packages can be installed using: + ``` + conda install -c openms pyopenms + conda install -c openms openms-thirdparty + conda install -c openms libopenms + ``` + +To install using bioconda: + +``` +conda install -c bioconda openms +conda install -c bioconda/label/cf201901 openms +conda install -c bioconda openms-tools +conda install -c bioconda libopenms +conda install -c bioconda openms-thirdparty +``` + ## Install via Debian Package For Debian-based Linux users, it is suggested to use the [deb-package](https://abibuilder.informatik.uni-tuebingen.de/archive/openms/OpenMSInstaller/release/latest/) provided. It is most easily installed with **[gdebi](https://launchpad.net/gdebi)** @@ -49,7 +73,7 @@ Debian package. ``` -## Installation via Building From Source Code +## Installation via building from source code The source code of OpenMS is available on GitHub. Follow [Building OpenMS on GNU/Linux](https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/nightly/html/install_linux.html) instructions on how to build OpenMS from source. diff --git a/docs/installations/installation-on-macos.md b/docs/installations/installation-on-macos.md index 2cad2a25..76651792 100644 --- a/docs/installations/installation-on-macos.md +++ b/docs/installations/installation-on-macos.md @@ -1,6 +1,8 @@ Installation on macOS ==================== +## Install via macOS installer + To install OpenMS on macOS, run the following steps: 1. Download and install the macOS drag-and-drop installer from the [archive](https://abibuilder.informatik.uni-tuebingen.de/archive/openms/OpenMSInstaller/release/latest/). @@ -35,6 +37,10 @@ source ${OPENMS_TOPP_PATH}/.TOPP_bash_profile Make sure `` points to the folder where OpenMS is installed locally (e.g., `/Applications/OpenMS-`) +## Install via Conda or Bioconda + +Follow [these](installation-on-gnu-linux.md#install-via-conda) instructions. + ## Known Issues 1. OpenMS software landing in quarantine since macOS Catalina after installation of the `.dmg`. diff --git a/docs/installations/installation-on-windows.md b/docs/installations/installation-on-windows.md index af57931e..6cf2b24b 100644 --- a/docs/installations/installation-on-windows.md +++ b/docs/installations/installation-on-windows.md @@ -1,6 +1,8 @@ Installation on Windows ======================= +## Install via Windows Installer + To Install the binary package of OpenMS & TOPP: 1. Download and execute the installer `OpenMS--Win64.exe` from the [archive](https://abibuilder.informatik.uni-tuebingen.de/archive/openms/OpenMSInstaller/release/latest/) and follow its instructions. @@ -12,7 +14,7 @@ The windows binary version works with most versions of windows from Win7 to Win1 still work but are untested). ``` - ## Known Issues +## Known Issues 1. During installation, an error message pops up, saying "The installation of the Microsoft .NET 3.5 SP1' package failed!