From 3aef2a278bcbd7d43fe6a694429fdf31053a22a0 Mon Sep 17 00:00:00 2001 From: Mingxin Zheng <18563433+mingxin-zheng@users.noreply.github.com> Date: Mon, 3 Apr 2023 13:40:45 +0000 Subject: [PATCH 1/2] fix cpuonly is not using CPU Signed-off-by: Mingxin Zheng <18563433+mingxin-zheng@users.noreply.github.com> --- tests/test_auto3dseg.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/test_auto3dseg.py b/tests/test_auto3dseg.py index deb54b7a4b..53f25051ec 100644 --- a/tests/test_auto3dseg.py +++ b/tests/test_auto3dseg.py @@ -184,7 +184,7 @@ def test_data_analyzer_cpu(self, input_params): ) analyser = DataAnalyzer( - self.datalist_file, self.dataroot_dir, output_path=self.datastat_file, label_key=label_key + self.datalist_file, self.dataroot_dir, output_path=self.datastat_file, label_key=label_key, device=device ) datastat = analyser.get_all_case_stats() From 04e52873922fc2de24e22f9ccf541634e3ba0609 Mon Sep 17 00:00:00 2001 From: Wenqi Li Date: Mon, 3 Apr 2023 19:20:23 +0100 Subject: [PATCH 2/2] fixes mypy error Signed-off-by: Wenqi Li --- monai/data/image_reader.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/monai/data/image_reader.py b/monai/data/image_reader.py index 03bffbb1e8..43086964ae 100644 --- a/monai/data/image_reader.py +++ b/monai/data/image_reader.py @@ -929,7 +929,7 @@ def read(self, data: Sequence[PathLike] | PathLike, **kwargs): for name in filenames: img = nib.load(name, **kwargs_) img = correct_nifti_header_if_necessary(img) - img_.append(img) + img_.append(img) # type: ignore return img_ if len(filenames) > 1 else img_[0] def get_data(self, img) -> tuple[np.ndarray, dict]: