R Under development (unstable) (2020-10-13 r79336) Platform: x86_64-pc-linux-gnu (64-bit) Running under: Pop!_OS 20.04 LTS Matrix products: default BLAS: /home/mdowle/build/R-devel/lib/libRblas.so LAPACK: /home/mdowle/build/R-devel/lib/libRlapack.so locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices datasets utils methods base other attached packages: [1] BiocManager_1.30.10 loaded via a namespace (and not attached): [1] compiler_4.1.0 tools_4.1.0 CornerstoneR_2.0.2.tar.gz ./CornerstoneR.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/CornerstoneR.Rcheck’ ./CornerstoneR.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./CornerstoneR.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./CornerstoneR.Rcheck/00check.log:* using session charset: UTF-8 ./CornerstoneR.Rcheck/00check.log:* checking for file ‘CornerstoneR/DESCRIPTION’ ... OK ./CornerstoneR.Rcheck/00check.log:* this is package ‘CornerstoneR’ version ‘2.0.2’ ./CornerstoneR.Rcheck/00check.log:* package encoding: UTF-8 ./CornerstoneR.Rcheck/00check.log:* checking package namespace information ... OK ./CornerstoneR.Rcheck/00check.log:* checking package dependencies ... OK ./CornerstoneR.Rcheck/00check.log:* checking if this is a source package ... OK ./CornerstoneR.Rcheck/00check.log:* checking if there is a namespace ... OK ./CornerstoneR.Rcheck/00check.log:* checking for executable files ... OK ./CornerstoneR.Rcheck/00check.log:* checking for hidden files and directories ... OK ./CornerstoneR.Rcheck/00check.log:* checking for portable file names ... OK ./CornerstoneR.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./CornerstoneR.Rcheck/00check.log:* checking whether package ‘CornerstoneR’ can be installed ... OK ./CornerstoneR.Rcheck/00check.log:* checking installed package size ... OK ./CornerstoneR.Rcheck/00check.log:* checking package directory ... OK ./CornerstoneR.Rcheck/00check.log:* checking ‘build’ directory ... OK ./CornerstoneR.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./CornerstoneR.Rcheck/00check.log:* checking top-level files ... OK ./CornerstoneR.Rcheck/00check.log:* checking for left-over files ... OK ./CornerstoneR.Rcheck/00check.log:* checking index information ... OK ./CornerstoneR.Rcheck/00check.log:* checking package subdirectories ... OK ./CornerstoneR.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./CornerstoneR.Rcheck/00check.log:* checking R files for syntax errors ... OK ./CornerstoneR.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./CornerstoneR.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./CornerstoneR.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./CornerstoneR.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./CornerstoneR.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./CornerstoneR.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./CornerstoneR.Rcheck/00check.log:* checking dependencies in R code ... OK ./CornerstoneR.Rcheck/00check.log:* checking S3 generic/method consistency ... OK ./CornerstoneR.Rcheck/00check.log:* checking replacement functions ... OK ./CornerstoneR.Rcheck/00check.log:* checking foreign function calls ... OK ./CornerstoneR.Rcheck/00check.log:* checking R code for possible problems ... OK ./CornerstoneR.Rcheck/00check.log:* checking Rd files ... OK ./CornerstoneR.Rcheck/00check.log:* checking Rd metadata ... OK ./CornerstoneR.Rcheck/00check.log:* checking Rd cross-references ... OK ./CornerstoneR.Rcheck/00check.log:* checking for missing documentation entries ... OK ./CornerstoneR.Rcheck/00check.log:* checking for code/documentation mismatches ... OK ./CornerstoneR.Rcheck/00check.log:* checking Rd \usage sections ... OK ./CornerstoneR.Rcheck/00check.log:* checking Rd contents ... OK ./CornerstoneR.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./CornerstoneR.Rcheck/00check.log:* checking contents of ‘data’ directory ... OK ./CornerstoneR.Rcheck/00check.log:* checking data for non-ASCII characters ... OK ./CornerstoneR.Rcheck/00check.log:* checking data for ASCII and uncompressed saves ... OK ./CornerstoneR.Rcheck/00check.log:* checking installed files from ‘inst/doc’ ... OK ./CornerstoneR.Rcheck/00check.log:* checking files in ‘vignettes’ ... OK ./CornerstoneR.Rcheck/00check.log:* checking examples ... OK ./CornerstoneR.Rcheck/00check.log:* checking for unstated dependencies in ‘tests’ ... OK ./CornerstoneR.Rcheck/00check.log:* checking tests ... ERROR ./CornerstoneR.Rcheck/00check.log: Running ‘testthat.R’ ./CornerstoneR.Rcheck/00check.log:Running the tests in ‘tests/testthat.R’ failed. ./CornerstoneR.Rcheck/00check.log:Complete output: ./CornerstoneR.Rcheck/00check.log: > library(testthat) ./CornerstoneR.Rcheck/00check.log: > library(CornerstoneR) ./CornerstoneR.Rcheck/00check.log: > ./CornerstoneR.Rcheck/00check.log: > test_check("CornerstoneR") ./CornerstoneR.Rcheck/00check.log: malloc(): smallbin double linked list corrupted ./CornerstoneR.Rcheck/00check.log: Aborted (core dumped) ./CornerstoneR.Rcheck/00check.log:* checking for unstated dependencies in vignettes ... OK ./CornerstoneR.Rcheck/00check.log:* checking package vignettes in ‘inst/doc’ ... OK ./CornerstoneR.Rcheck/00check.log:* checking running R code from vignettes ... NONE ./CornerstoneR.Rcheck/00check.log: ‘fitFunction.Rmd’ using ‘UTF-8’... OK ./CornerstoneR.Rcheck/00check.log: ‘matchNearestNeighbor.Rmd’ using ‘UTF-8’... OK ./CornerstoneR.Rcheck/00check.log: ‘mosaicPlot.Rmd’ using ‘UTF-8’... OK ./CornerstoneR.Rcheck/00check.log: ‘randomForest.Rmd’ using ‘UTF-8’... OK ./CornerstoneR.Rcheck/00check.log: ‘redirectDataset.Rmd’ using ‘UTF-8’... OK ./CornerstoneR.Rcheck/00check.log: ‘reshape.Rmd’ using ‘UTF-8’... OK ./CornerstoneR.Rcheck/00check.log: ‘showVersions.Rmd’ using ‘UTF-8’... OK ./CornerstoneR.Rcheck/00check.log:* checking re-building of vignette outputs ... OK ./CornerstoneR.Rcheck/00check.log:* checking PDF version of manual ... OK ./CornerstoneR.Rcheck/00check.log:* DONE ./CornerstoneR.Rcheck/00check.log:Status: 1 ERROR eplusr_0.13.0.tar.gz ./eplusr.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/eplusr.Rcheck’ ./eplusr.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./eplusr.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./eplusr.Rcheck/00check.log:* using session charset: UTF-8 ./eplusr.Rcheck/00check.log:* checking for file ‘eplusr/DESCRIPTION’ ... OK ./eplusr.Rcheck/00check.log:* this is package ‘eplusr’ version ‘0.13.0’ ./eplusr.Rcheck/00check.log:* package encoding: UTF-8 ./eplusr.Rcheck/00check.log:* checking package namespace information ... OK ./eplusr.Rcheck/00check.log:* checking package dependencies ... OK ./eplusr.Rcheck/00check.log:* checking if this is a source package ... OK ./eplusr.Rcheck/00check.log:* checking if there is a namespace ... OK ./eplusr.Rcheck/00check.log:* checking for executable files ... OK ./eplusr.Rcheck/00check.log:* checking for hidden files and directories ... OK ./eplusr.Rcheck/00check.log:* checking for portable file names ... OK ./eplusr.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./eplusr.Rcheck/00check.log:* checking whether package ‘eplusr’ can be installed ... OK ./eplusr.Rcheck/00check.log:* checking installed package size ... OK ./eplusr.Rcheck/00check.log:* checking package directory ... OK ./eplusr.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./eplusr.Rcheck/00check.log:* checking top-level files ... OK ./eplusr.Rcheck/00check.log:* checking for left-over files ... OK ./eplusr.Rcheck/00check.log:* checking index information ... OK ./eplusr.Rcheck/00check.log:* checking package subdirectories ... OK ./eplusr.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./eplusr.Rcheck/00check.log:* checking R files for syntax errors ... OK ./eplusr.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./eplusr.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./eplusr.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./eplusr.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./eplusr.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./eplusr.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./eplusr.Rcheck/00check.log:* checking dependencies in R code ... OK ./eplusr.Rcheck/00check.log:* checking S3 generic/method consistency ... OK ./eplusr.Rcheck/00check.log:* checking replacement functions ... OK ./eplusr.Rcheck/00check.log:* checking foreign function calls ... OK ./eplusr.Rcheck/00check.log:* checking R code for possible problems ... OK ./eplusr.Rcheck/00check.log:* checking Rd files ... OK ./eplusr.Rcheck/00check.log:* checking Rd metadata ... OK ./eplusr.Rcheck/00check.log:* checking Rd cross-references ... OK ./eplusr.Rcheck/00check.log:* checking for missing documentation entries ... OK ./eplusr.Rcheck/00check.log:* checking for code/documentation mismatches ... OK ./eplusr.Rcheck/00check.log:* checking Rd \usage sections ... OK ./eplusr.Rcheck/00check.log:* checking Rd contents ... OK ./eplusr.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./eplusr.Rcheck/00check.log:* checking R/sysdata.rda ... OK ./eplusr.Rcheck/00check.log:* checking examples ... OK ./eplusr.Rcheck/00check.log:* checking for unstated dependencies in ‘tests’ ... OK ./eplusr.Rcheck/00check.log:* checking tests ... ERROR ./eplusr.Rcheck/00check.log: Running ‘testthat.R’ ./eplusr.Rcheck/00check.log:Running the tests in ‘tests/testthat.R’ failed. ./eplusr.Rcheck/00check.log:Last 13 lines of output: ./eplusr.Rcheck/00check.log: Component 2: Component 3: Mean relative difference: 1 ./eplusr.Rcheck/00check.log: ./eplusr.Rcheck/00check.log: trying URL 'https://raw.githubusercontent.com/NREL/EnergyPlus/v9.2.0/idd/V8-9-0-Energy%2B.idd' ./eplusr.Rcheck/00check.log: Content type 'text/plain; charset=utf-8' length 4390209 bytes (4.2 MB) ./eplusr.Rcheck/00check.log: ================================================== ./eplusr.Rcheck/00check.log: downloaded 4.2 MB ./eplusr.Rcheck/00check.log: ./eplusr.Rcheck/00check.log: ══ testthat results ═══════════════════════════════════════════════════════════ ./eplusr.Rcheck/00check.log: [ OK: 2063 | SKIPPED: 73 | WARNINGS: 0 | FAILED: 3 ] ./eplusr.Rcheck/00check.log: 1. Failure: $to_table() (@test-idf.R#921) ./eplusr.Rcheck/00check.log: 2. Failure: $to_table() (@test-idf.R#997) ./eplusr.Rcheck/00check.log: 3. Failure: to_table (@test-impl-idf.R#2382) ./eplusr.Rcheck/00check.log: ./eplusr.Rcheck/00check.log: Error: testthat unit tests failed ./eplusr.Rcheck/00check.log: Execution halted ./eplusr.Rcheck/00check.log:* checking PDF version of manual ... OK ./eplusr.Rcheck/00check.log:* DONE ./eplusr.Rcheck/00check.log:Status: 1 ERROR RBMRB_2.1.2.tar.gz ./RBMRB.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/RBMRB.Rcheck’ ./RBMRB.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./RBMRB.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./RBMRB.Rcheck/00check.log:* using session charset: UTF-8 ./RBMRB.Rcheck/00check.log:* checking for file ‘RBMRB/DESCRIPTION’ ... OK ./RBMRB.Rcheck/00check.log:* checking extension type ... Package ./RBMRB.Rcheck/00check.log:* this is package ‘RBMRB’ version ‘2.1.2’ ./RBMRB.Rcheck/00check.log:* checking package namespace information ... OK ./RBMRB.Rcheck/00check.log:* checking package dependencies ... OK ./RBMRB.Rcheck/00check.log:* checking if this is a source package ... OK ./RBMRB.Rcheck/00check.log:* checking if there is a namespace ... OK ./RBMRB.Rcheck/00check.log:* checking for executable files ... OK ./RBMRB.Rcheck/00check.log:* checking for hidden files and directories ... OK ./RBMRB.Rcheck/00check.log:* checking for portable file names ... OK ./RBMRB.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./RBMRB.Rcheck/00check.log:* checking whether package ‘RBMRB’ can be installed ... OK ./RBMRB.Rcheck/00check.log:* checking installed package size ... OK ./RBMRB.Rcheck/00check.log:* checking package directory ... OK ./RBMRB.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./RBMRB.Rcheck/00check.log:* checking top-level files ... OK ./RBMRB.Rcheck/00check.log:* checking for left-over files ... OK ./RBMRB.Rcheck/00check.log:* checking index information ... OK ./RBMRB.Rcheck/00check.log:* checking package subdirectories ... OK ./RBMRB.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./RBMRB.Rcheck/00check.log:* checking R files for syntax errors ... OK ./RBMRB.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./RBMRB.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./RBMRB.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./RBMRB.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./RBMRB.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./RBMRB.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./RBMRB.Rcheck/00check.log:* checking dependencies in R code ... OK ./RBMRB.Rcheck/00check.log:* checking S3 generic/method consistency ... OK ./RBMRB.Rcheck/00check.log:* checking replacement functions ... OK ./RBMRB.Rcheck/00check.log:* checking foreign function calls ... OK ./RBMRB.Rcheck/00check.log:* checking R code for possible problems ... OK ./RBMRB.Rcheck/00check.log:* checking Rd files ... OK ./RBMRB.Rcheck/00check.log:* checking Rd metadata ... OK ./RBMRB.Rcheck/00check.log:* checking Rd cross-references ... OK ./RBMRB.Rcheck/00check.log:* checking for missing documentation entries ... OK ./RBMRB.Rcheck/00check.log:* checking for code/documentation mismatches ... OK ./RBMRB.Rcheck/00check.log:* checking Rd \usage sections ... OK ./RBMRB.Rcheck/00check.log:* checking Rd contents ... OK ./RBMRB.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./RBMRB.Rcheck/00check.log:* checking examples ... ERROR ./RBMRB.Rcheck/00check.log:Running examples in ‘RBMRB-Ex.R’ failed ./RBMRB.Rcheck/00check.log:The error most likely occurred in: ./RBMRB.Rcheck/00check.log:> ### Name: HSQC_15N ./RBMRB.Rcheck/00check.log:> ### Title: Simulates H1-N15 HSQC spectra for a given entry or list of ./RBMRB.Rcheck/00check.log:> ### entries from BMRB ./RBMRB.Rcheck/00check.log:> ### Aliases: HSQC_15N ./RBMRB.Rcheck/00check.log:> ./RBMRB.Rcheck/00check.log:> ### ** Examples ./RBMRB.Rcheck/00check.log:> ./RBMRB.Rcheck/00check.log:> plot_hsqc<-HSQC_15N(c(17074,17076,17077)) ./RBMRB.Rcheck/00check.log:Error in rjson::fromJSON(httr::content(rawdata, "text", encoding = "UTF-8")) : ./RBMRB.Rcheck/00check.log: unexpected character '<' ./RBMRB.Rcheck/00check.log:Calls: HSQC_15N ... fetch_entry_chemical_shifts -> fetch_entry_cs -> ./RBMRB.Rcheck/00check.log:Execution halted ./RBMRB.Rcheck/00check.log:* checking PDF version of manual ... OK ./RBMRB.Rcheck/00check.log:* DONE ./RBMRB.Rcheck/00check.log:Status: 1 ERROR spatsoc_0.1.14.tar.gz ./spatsoc.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/spatsoc.Rcheck’ ./spatsoc.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./spatsoc.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./spatsoc.Rcheck/00check.log:* using session charset: UTF-8 ./spatsoc.Rcheck/00check.log:* checking for file ‘spatsoc/DESCRIPTION’ ... OK ./spatsoc.Rcheck/00check.log:* this is package ‘spatsoc’ version ‘0.1.14’ ./spatsoc.Rcheck/00check.log:* package encoding: UTF-8 ./spatsoc.Rcheck/00check.log:* checking package namespace information ... OK ./spatsoc.Rcheck/00check.log:* checking package dependencies ... OK ./spatsoc.Rcheck/00check.log:* checking if this is a source package ... OK ./spatsoc.Rcheck/00check.log:* checking if there is a namespace ... OK ./spatsoc.Rcheck/00check.log:* checking for executable files ... OK ./spatsoc.Rcheck/00check.log:* checking for hidden files and directories ... OK ./spatsoc.Rcheck/00check.log:* checking for portable file names ... OK ./spatsoc.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./spatsoc.Rcheck/00check.log:* checking whether package ‘spatsoc’ can be installed ... OK ./spatsoc.Rcheck/00check.log:* checking installed package size ... OK ./spatsoc.Rcheck/00check.log:* checking package directory ... OK ./spatsoc.Rcheck/00check.log:* checking ‘build’ directory ... OK ./spatsoc.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./spatsoc.Rcheck/00check.log:* checking top-level files ... OK ./spatsoc.Rcheck/00check.log:* checking for left-over files ... OK ./spatsoc.Rcheck/00check.log:* checking index information ... OK ./spatsoc.Rcheck/00check.log:* checking package subdirectories ... OK ./spatsoc.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./spatsoc.Rcheck/00check.log:* checking R files for syntax errors ... OK ./spatsoc.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./spatsoc.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./spatsoc.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./spatsoc.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./spatsoc.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./spatsoc.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./spatsoc.Rcheck/00check.log:* checking dependencies in R code ... OK ./spatsoc.Rcheck/00check.log:* checking S3 generic/method consistency ... OK ./spatsoc.Rcheck/00check.log:* checking replacement functions ... OK ./spatsoc.Rcheck/00check.log:* checking foreign function calls ... OK ./spatsoc.Rcheck/00check.log:* checking R code for possible problems ... OK ./spatsoc.Rcheck/00check.log:* checking Rd files ... OK ./spatsoc.Rcheck/00check.log:* checking Rd metadata ... OK ./spatsoc.Rcheck/00check.log:* checking Rd cross-references ... OK ./spatsoc.Rcheck/00check.log:* checking for missing documentation entries ... OK ./spatsoc.Rcheck/00check.log:* checking for code/documentation mismatches ... OK ./spatsoc.Rcheck/00check.log:* checking Rd \usage sections ... OK ./spatsoc.Rcheck/00check.log:* checking Rd contents ... OK ./spatsoc.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./spatsoc.Rcheck/00check.log:* checking installed files from ‘inst/doc’ ... OK ./spatsoc.Rcheck/00check.log:* checking files in ‘vignettes’ ... OK ./spatsoc.Rcheck/00check.log:* checking examples ... OK ./spatsoc.Rcheck/00check.log:* checking for unstated dependencies in ‘tests’ ... OK ./spatsoc.Rcheck/00check.log:* checking tests ... ERROR ./spatsoc.Rcheck/00check.log: Running ‘testthat.R’ ./spatsoc.Rcheck/00check.log:Running the tests in ‘tests/testthat.R’ failed. ./spatsoc.Rcheck/00check.log:Complete output: ./spatsoc.Rcheck/00check.log: > library(testthat) ./spatsoc.Rcheck/00check.log: > library(spatsoc) ./spatsoc.Rcheck/00check.log: > ./spatsoc.Rcheck/00check.log: > test_check("spatsoc") ./spatsoc.Rcheck/00check.log: ── 1. Failure: time field is appropriate format (@test-time.R#54) ───────────── ./spatsoc.Rcheck/00check.log: `group_times(copyDT, datetime = "datetime", threshold = "60 minutes")` did not throw an error. ./spatsoc.Rcheck/00check.log: ./spatsoc.Rcheck/00check.log: ══ testthat results ═══════════════════════════════════════════════════════════ ./spatsoc.Rcheck/00check.log: [ OK: 266 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ] ./spatsoc.Rcheck/00check.log: 1. Failure: time field is appropriate format (@test-time.R#54) ./spatsoc.Rcheck/00check.log: ./spatsoc.Rcheck/00check.log: Error: testthat unit tests failed ./spatsoc.Rcheck/00check.log: Execution halted ./spatsoc.Rcheck/00check.log:* checking for unstated dependencies in vignettes ... OK ./spatsoc.Rcheck/00check.log:* checking package vignettes in ‘inst/doc’ ... OK ./spatsoc.Rcheck/00check.log:* checking running R code from vignettes ... NONE ./spatsoc.Rcheck/00check.log: ‘using-edge-and-dyad.Rmd’ using ‘UTF-8’... OK ./spatsoc.Rcheck/00check.log: ‘faq.Rmd’ using ‘UTF-8’... OK ./spatsoc.Rcheck/00check.log: ‘intro-spatsoc.Rmd’ using ‘UTF-8’... OK ./spatsoc.Rcheck/00check.log: ‘using-in-sna.Rmd’ using ‘UTF-8’... OK ./spatsoc.Rcheck/00check.log:* checking re-building of vignette outputs ... OK ./spatsoc.Rcheck/00check.log:* checking PDF version of manual ... OK ./spatsoc.Rcheck/00check.log:* DONE ./spatsoc.Rcheck/00check.log:Status: 1 ERROR tstools_0.3.8.tar.gz ./tstools.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/tstools.Rcheck’ ./tstools.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./tstools.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./tstools.Rcheck/00check.log:* using session charset: UTF-8 ./tstools.Rcheck/00check.log:* checking for file ‘tstools/DESCRIPTION’ ... OK ./tstools.Rcheck/00check.log:* checking extension type ... Package ./tstools.Rcheck/00check.log:* this is package ‘tstools’ version ‘0.3.8’ ./tstools.Rcheck/00check.log:* checking package namespace information ... OK ./tstools.Rcheck/00check.log:* checking package dependencies ... OK ./tstools.Rcheck/00check.log:* checking if this is a source package ... OK ./tstools.Rcheck/00check.log:* checking if there is a namespace ... OK ./tstools.Rcheck/00check.log:* checking for executable files ... OK ./tstools.Rcheck/00check.log:* checking for hidden files and directories ... OK ./tstools.Rcheck/00check.log:* checking for portable file names ... OK ./tstools.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./tstools.Rcheck/00check.log:* checking whether package ‘tstools’ can be installed ... OK ./tstools.Rcheck/00check.log:* checking installed package size ... OK ./tstools.Rcheck/00check.log:* checking package directory ... OK ./tstools.Rcheck/00check.log:* checking ‘build’ directory ... OK ./tstools.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./tstools.Rcheck/00check.log:* checking top-level files ... OK ./tstools.Rcheck/00check.log:* checking for left-over files ... OK ./tstools.Rcheck/00check.log:* checking index information ... OK ./tstools.Rcheck/00check.log:* checking package subdirectories ... OK ./tstools.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./tstools.Rcheck/00check.log:* checking R files for syntax errors ... OK ./tstools.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./tstools.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./tstools.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./tstools.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./tstools.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./tstools.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./tstools.Rcheck/00check.log:* checking dependencies in R code ... OK ./tstools.Rcheck/00check.log:* checking S3 generic/method consistency ... OK ./tstools.Rcheck/00check.log:* checking replacement functions ... OK ./tstools.Rcheck/00check.log:* checking foreign function calls ... OK ./tstools.Rcheck/00check.log:* checking R code for possible problems ... OK ./tstools.Rcheck/00check.log:* checking Rd files ... OK ./tstools.Rcheck/00check.log:* checking Rd metadata ... OK ./tstools.Rcheck/00check.log:* checking Rd cross-references ... OK ./tstools.Rcheck/00check.log:* checking for missing documentation entries ... OK ./tstools.Rcheck/00check.log:* checking for code/documentation mismatches ... OK ./tstools.Rcheck/00check.log:* checking Rd \usage sections ... OK ./tstools.Rcheck/00check.log:* checking Rd contents ... OK ./tstools.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./tstools.Rcheck/00check.log:* checking contents of ‘data’ directory ... OK ./tstools.Rcheck/00check.log:* checking data for non-ASCII characters ... OK ./tstools.Rcheck/00check.log:* checking data for ASCII and uncompressed saves ... OK ./tstools.Rcheck/00check.log:* checking installed files from ‘inst/doc’ ... OK ./tstools.Rcheck/00check.log:* checking files in ‘vignettes’ ... OK ./tstools.Rcheck/00check.log:* checking examples ... OK ./tstools.Rcheck/00check.log:* checking for unstated dependencies in ‘tests’ ... OK ./tstools.Rcheck/00check.log:* checking tests ... ERROR ./tstools.Rcheck/00check.log: Running ‘testthat.R’ ./tstools.Rcheck/00check.log:Running the tests in ‘tests/testthat.R’ failed. ./tstools.Rcheck/00check.log:Last 13 lines of output: ./tstools.Rcheck/00check.log: ══ testthat results ═══════════════════════════════════════════════════════════ ./tstools.Rcheck/00check.log: [ OK: 117 | SKIPPED: 0 | WARNINGS: 21 | FAILED: 18 ] ./tstools.Rcheck/00check.log: 1. Failure: imports work (@testWriteTimeseries.R#252) ./tstools.Rcheck/00check.log: 2. Failure: imports work (@testWriteTimeseries.R#253) ./tstools.Rcheck/00check.log: 3. Failure: imports work (@testWriteTimeseries.R#254) ./tstools.Rcheck/00check.log: 4. Failure: imports work (@testWriteTimeseries.R#255) ./tstools.Rcheck/00check.log: 5. Failure: imports work (@testWriteTimeseries.R#256) ./tstools.Rcheck/00check.log: 6. Failure: imports work (@testWriteTimeseries.R#257) ./tstools.Rcheck/00check.log: 7. Failure: imports work (@testWriteTimeseries.R#252) ./tstools.Rcheck/00check.log: 8. Failure: imports work (@testWriteTimeseries.R#253) ./tstools.Rcheck/00check.log: 9. Failure: imports work (@testWriteTimeseries.R#254) ./tstools.Rcheck/00check.log: 1. ... ./tstools.Rcheck/00check.log: ./tstools.Rcheck/00check.log: Error: testthat unit tests failed ./tstools.Rcheck/00check.log: Execution halted ./tstools.Rcheck/00check.log:* checking for unstated dependencies in vignettes ... OK ./tstools.Rcheck/00check.log:* checking package vignettes in ‘inst/doc’ ... OK ./tstools.Rcheck/00check.log:* checking running R code from vignettes ... NONE ./tstools.Rcheck/00check.log: ‘tstools.Rmd’... OK ./tstools.Rcheck/00check.log:* checking re-building of vignette outputs ... OK ./tstools.Rcheck/00check.log:* checking PDF version of manual ... OK ./tstools.Rcheck/00check.log:* DONE ./tstools.Rcheck/00check.log:Status: 1 ERROR wyz.code.metaTesting_1.1.12.tar.gz ./wyz.code.metaTesting.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/wyz.code.metaTesting.Rcheck’ ./wyz.code.metaTesting.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./wyz.code.metaTesting.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./wyz.code.metaTesting.Rcheck/00check.log:* using session charset: UTF-8 ./wyz.code.metaTesting.Rcheck/00check.log:* checking for file ‘wyz.code.metaTesting/DESCRIPTION’ ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking extension type ... Package ./wyz.code.metaTesting.Rcheck/00check.log:* this is package ‘wyz.code.metaTesting’ version ‘1.1.12’ ./wyz.code.metaTesting.Rcheck/00check.log:* package encoding: UTF-8 ./wyz.code.metaTesting.Rcheck/00check.log:* checking package namespace information ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking package dependencies ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking if this is a source package ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking if there is a namespace ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for executable files ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for hidden files and directories ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for portable file names ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking whether package ‘wyz.code.metaTesting’ can be installed ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking installed package size ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking package directory ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking ‘build’ directory ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking top-level files ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for left-over files ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking index information ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking package subdirectories ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking R files for syntax errors ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking dependencies in R code ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking S3 generic/method consistency ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking replacement functions ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking foreign function calls ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking R code for possible problems ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking Rd files ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking Rd metadata ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking Rd cross-references ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for missing documentation entries ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for code/documentation mismatches ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking Rd \usage sections ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking Rd contents ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking installed files from ‘inst/doc’ ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking files in ‘vignettes’ ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking examples ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking for unstated dependencies in ‘tests’ ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking tests ... ERROR ./wyz.code.metaTesting.Rcheck/00check.log: Running ‘testthat.R’ ./wyz.code.metaTesting.Rcheck/00check.log:Running the tests in ‘tests/testthat.R’ failed. ./wyz.code.metaTesting.Rcheck/00check.log:Last 13 lines of output: ./wyz.code.metaTesting.Rcheck/00check.log: > library(testthat) ./wyz.code.metaTesting.Rcheck/00check.log: > ./wyz.code.metaTesting.Rcheck/00check.log: > library("wyz.code.metaTesting") ./wyz.code.metaTesting.Rcheck/00check.log: > test_check("wyz.code.metaTesting") ./wyz.code.metaTesting.Rcheck/00check.log: ── 1. Failure: computeArgumentsCombination (@test_computeArgumentsCombination.R# ./wyz.code.metaTesting.Rcheck/00check.log: 3L not equal to 2. ./wyz.code.metaTesting.Rcheck/00check.log: 1/1 mismatches ./wyz.code.metaTesting.Rcheck/00check.log: [1] 3 - 2 == 1 ./wyz.code.metaTesting.Rcheck/00check.log: ./wyz.code.metaTesting.Rcheck/00check.log: ══ testthat results ═══════════════════════════════════════════════════════════ ./wyz.code.metaTesting.Rcheck/00check.log: [ OK: 490 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ] ./wyz.code.metaTesting.Rcheck/00check.log: 1. Failure: computeArgumentsCombination (@test_computeArgumentsCombination.R#58) ./wyz.code.metaTesting.Rcheck/00check.log: ./wyz.code.metaTesting.Rcheck/00check.log: Error: testthat unit tests failed ./wyz.code.metaTesting.Rcheck/00check.log: Execution halted ./wyz.code.metaTesting.Rcheck/00check.log:* checking for unstated dependencies in vignettes ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking package vignettes in ‘inst/doc’ ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking running R code from vignettes ... NONE ./wyz.code.metaTesting.Rcheck/00check.log: ‘releases.Rmd’ using ‘UTF-8’... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking re-building of vignette outputs ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* checking PDF version of manual ... OK ./wyz.code.metaTesting.Rcheck/00check.log:* DONE ./wyz.code.metaTesting.Rcheck/00check.log:Status: 1 ERROR hsrecombi_0.3.1.tar.gz ./hsrecombi.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/hsrecombi.Rcheck’ ./hsrecombi.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./hsrecombi.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./hsrecombi.Rcheck/00check.log:* using session charset: UTF-8 ./hsrecombi.Rcheck/00check.log:* checking for file ‘hsrecombi/DESCRIPTION’ ... OK ./hsrecombi.Rcheck/00check.log:* checking extension type ... Package ./hsrecombi.Rcheck/00check.log:* this is package ‘hsrecombi’ version ‘0.3.1’ ./hsrecombi.Rcheck/00check.log:* package encoding: UTF-8 ./hsrecombi.Rcheck/00check.log:* checking package namespace information ... OK ./hsrecombi.Rcheck/00check.log:* checking package dependencies ... OK ./hsrecombi.Rcheck/00check.log:* checking if this is a source package ... OK ./hsrecombi.Rcheck/00check.log:* checking if there is a namespace ... OK ./hsrecombi.Rcheck/00check.log:* checking for executable files ... OK ./hsrecombi.Rcheck/00check.log:* checking for hidden files and directories ... OK ./hsrecombi.Rcheck/00check.log:* checking for portable file names ... OK ./hsrecombi.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./hsrecombi.Rcheck/00check.log:* checking whether package ‘hsrecombi’ can be installed ... OK ./hsrecombi.Rcheck/00check.log:* checking installed package size ... OK ./hsrecombi.Rcheck/00check.log:* checking package directory ... OK ./hsrecombi.Rcheck/00check.log:* checking ‘build’ directory ... OK ./hsrecombi.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./hsrecombi.Rcheck/00check.log:* checking top-level files ... OK ./hsrecombi.Rcheck/00check.log:* checking for left-over files ... OK ./hsrecombi.Rcheck/00check.log:* checking index information ... OK ./hsrecombi.Rcheck/00check.log:* checking package subdirectories ... OK ./hsrecombi.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./hsrecombi.Rcheck/00check.log:* checking R files for syntax errors ... OK ./hsrecombi.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./hsrecombi.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./hsrecombi.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./hsrecombi.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./hsrecombi.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./hsrecombi.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./hsrecombi.Rcheck/00check.log:* checking dependencies in R code ... OK ./hsrecombi.Rcheck/00check.log:* checking S3 generic/method consistency ... OK ./hsrecombi.Rcheck/00check.log:* checking replacement functions ... OK ./hsrecombi.Rcheck/00check.log:* checking foreign function calls ... OK ./hsrecombi.Rcheck/00check.log:* checking R code for possible problems ... OK ./hsrecombi.Rcheck/00check.log:* checking Rd files ... OK ./hsrecombi.Rcheck/00check.log:* checking Rd metadata ... OK ./hsrecombi.Rcheck/00check.log:* checking Rd cross-references ... OK ./hsrecombi.Rcheck/00check.log:* checking for missing documentation entries ... OK ./hsrecombi.Rcheck/00check.log:* checking for code/documentation mismatches ... OK ./hsrecombi.Rcheck/00check.log:* checking Rd \usage sections ... OK ./hsrecombi.Rcheck/00check.log:* checking Rd contents ... OK ./hsrecombi.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./hsrecombi.Rcheck/00check.log:* checking contents of ‘data’ directory ... OK ./hsrecombi.Rcheck/00check.log:* checking data for non-ASCII characters ... OK ./hsrecombi.Rcheck/00check.log:* checking data for ASCII and uncompressed saves ... OK ./hsrecombi.Rcheck/00check.log:* checking line endings in C/C++/Fortran sources/headers ... OK ./hsrecombi.Rcheck/00check.log:* checking compiled code ... OK ./hsrecombi.Rcheck/00check.log:* checking installed files from ‘inst/doc’ ... OK ./hsrecombi.Rcheck/00check.log:* checking files in ‘vignettes’ ... OK ./hsrecombi.Rcheck/00check.log:* checking examples ... OK ./hsrecombi.Rcheck/00check.log:* checking for unstated dependencies in vignettes ... OK ./hsrecombi.Rcheck/00check.log:* checking package vignettes in ‘inst/doc’ ... OK ./hsrecombi.Rcheck/00check.log:* checking running R code from vignettes ... NONE ./hsrecombi.Rcheck/00check.log: ‘hsrecombi_workflow.Rmd’ using ‘UTF-8’... OK ./hsrecombi.Rcheck/00check.log:* checking re-building of vignette outputs ... WARNING ./hsrecombi.Rcheck/00check.log:Error(s) in re-building vignettes: ./hsrecombi.Rcheck/00check.log: ... ./hsrecombi.Rcheck/00check.log:--- re-building ‘hsrecombi_workflow.Rmd’ using rmarkdown ./hsrecombi.Rcheck/00check.log:Quitting from lines 57-68 (hsrecombi_workflow.Rmd) ./hsrecombi.Rcheck/00check.log:Error: processing vignette 'hsrecombi_workflow.Rmd' failed with diagnostics: ./hsrecombi.Rcheck/00check.log:attempt to apply non-function ./hsrecombi.Rcheck/00check.log:--- failed re-building ‘hsrecombi_workflow.Rmd’ ./hsrecombi.Rcheck/00check.log:SUMMARY: processing the following file failed: ./hsrecombi.Rcheck/00check.log: ‘hsrecombi_workflow.Rmd’ ./hsrecombi.Rcheck/00check.log:Error: Vignette re-building failed. ./hsrecombi.Rcheck/00check.log:Execution halted ./hsrecombi.Rcheck/00check.log:* checking PDF version of manual ... OK ./hsrecombi.Rcheck/00check.log:* DONE ./hsrecombi.Rcheck/00check.log:Status: 1 WARNING metaMix_0.3.tar.gz ./metaMix.Rcheck/00check.log:* using log directory ‘/home/mdowle/build/revdeplib/metaMix.Rcheck’ ./metaMix.Rcheck/00check.log:* using R Under development (unstable) (2020-10-13 r79336) ./metaMix.Rcheck/00check.log:* using platform: x86_64-pc-linux-gnu (64-bit) ./metaMix.Rcheck/00check.log:* using session charset: UTF-8 ./metaMix.Rcheck/00check.log:* checking for file ‘metaMix/DESCRIPTION’ ... OK ./metaMix.Rcheck/00check.log:* this is package ‘metaMix’ version ‘0.3’ ./metaMix.Rcheck/00check.log:* package encoding: UTF-8 ./metaMix.Rcheck/00check.log:* checking package namespace information ... OK ./metaMix.Rcheck/00check.log:* checking package dependencies ... OK ./metaMix.Rcheck/00check.log:* checking if this is a source package ... OK ./metaMix.Rcheck/00check.log:* checking if there is a namespace ... OK ./metaMix.Rcheck/00check.log:* checking for executable files ... OK ./metaMix.Rcheck/00check.log:* checking for hidden files and directories ... OK ./metaMix.Rcheck/00check.log:* checking for portable file names ... OK ./metaMix.Rcheck/00check.log:* checking for sufficient/correct file permissions ... OK ./metaMix.Rcheck/00check.log:* checking whether package ‘metaMix’ can be installed ... OK ./metaMix.Rcheck/00check.log:* checking installed package size ... OK ./metaMix.Rcheck/00check.log:* checking package directory ... OK ./metaMix.Rcheck/00check.log:* checking ‘build’ directory ... OK ./metaMix.Rcheck/00check.log:* checking DESCRIPTION meta-information ... OK ./metaMix.Rcheck/00check.log:* checking top-level files ... OK ./metaMix.Rcheck/00check.log:* checking for left-over files ... OK ./metaMix.Rcheck/00check.log:* checking index information ... OK ./metaMix.Rcheck/00check.log:* checking package subdirectories ... OK ./metaMix.Rcheck/00check.log:* checking R files for non-ASCII characters ... OK ./metaMix.Rcheck/00check.log:* checking R files for syntax errors ... OK ./metaMix.Rcheck/00check.log:* checking whether the package can be loaded ... OK ./metaMix.Rcheck/00check.log:* checking whether the package can be loaded with stated dependencies ... OK ./metaMix.Rcheck/00check.log:* checking whether the package can be unloaded cleanly ... OK ./metaMix.Rcheck/00check.log:* checking whether the namespace can be loaded with stated dependencies ... OK ./metaMix.Rcheck/00check.log:* checking whether the namespace can be unloaded cleanly ... OK ./metaMix.Rcheck/00check.log:* checking loading without being on the library search path ... OK ./metaMix.Rcheck/00check.log:* checking dependencies in R code ... NOTE ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:* checking S3 generic/method consistency ... WARNING ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:See section ‘Generic functions and methods’ in the ‘Writing R Extensions’ manual. ./metaMix.Rcheck/00check.log:* checking replacement functions ... WARNING ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:The argument of a replacement function which corresponds to the right hand side must be named ‘value’. ./metaMix.Rcheck/00check.log:* checking foreign function calls ... NOTE ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:See chapter ‘System and foreign language interfaces’ in the ‘Writing R Extensions’ manual. ./metaMix.Rcheck/00check.log:* checking R code for possible problems ... NOTE ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:* checking Rd files ... OK ./metaMix.Rcheck/00check.log:* checking Rd metadata ... OK ./metaMix.Rcheck/00check.log:* checking Rd cross-references ... OK ./metaMix.Rcheck/00check.log:* checking for missing documentation entries ... WARNING ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:All user-level objects in a package should have documentation entries. ./metaMix.Rcheck/00check.log:See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. ./metaMix.Rcheck/00check.log:* checking for code/documentation mismatches ... WARNING ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:* checking Rd \usage sections ... NOTE ./metaMix.Rcheck/00check.log:Invalid MIT-MAGIC-COOKIE-1 key ./metaMix.Rcheck/00check.log:The \usage entries for S3 methods should use the \method markup and not their full name. ./metaMix.Rcheck/00check.log:See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. ./metaMix.Rcheck/00check.log:* checking Rd contents ... OK ./metaMix.Rcheck/00check.log:* checking for unstated dependencies in examples ... OK ./metaMix.Rcheck/00check.log:* checking contents of ‘data’ directory ... OK ./metaMix.Rcheck/00check.log:* checking data for non-ASCII characters ... OK ./metaMix.Rcheck/00check.log:* checking data for ASCII and uncompressed saves ... OK ./metaMix.Rcheck/00check.log:* checking line endings in C/C++/Fortran sources/headers ... OK ./metaMix.Rcheck/00check.log:* checking compiled code ... OK ./metaMix.Rcheck/00check.log:* checking sizes of PDF files under ‘inst/doc’ ... OK ./metaMix.Rcheck/00check.log:* checking installed files from ‘inst/doc’ ... OK ./metaMix.Rcheck/00check.log:* checking files in ‘vignettes’ ... OK ./metaMix.Rcheck/00check.log:* checking examples ... OK ./metaMix.Rcheck/00check.log:* checking for unstated dependencies in vignettes ... OK ./metaMix.Rcheck/00check.log:* checking package vignettes in ‘inst/doc’ ... OK ./metaMix.Rcheck/00check.log:* checking running R code from vignettes ... NONE ./metaMix.Rcheck/00check.log: ‘guide.Rnw’ using ‘UTF-8’... OK ./metaMix.Rcheck/00check.log:* checking re-building of vignette outputs ... OK ./metaMix.Rcheck/00check.log:* checking PDF version of manual ... OK ./metaMix.Rcheck/00check.log:* DONE ./metaMix.Rcheck/00check.log:Status: 4 WARNINGs, 4 NOTEs