setup.bat

@echo off
REM Installation script for TopSpin Python API Wrapper
REM This script sets up the Python environment and installs dependencies

echo ========================================
echo TopSpin Python API Wrapper - Setup
echo ========================================
echo.

REM Check if uv is installed
where uv >nul 2>nul
if %errorlevel% neq 0 (
    echo [ERROR] uv is not installed!
    echo Please install uv first:
    echo   pip install uv
    echo.
    exit /b 1
)

echo [1/4] Installing Python dependencies...
uv pip install numpy xarray matplotlib adjustText
if %errorlevel% neq 0 (
    echo [ERROR] Failed to install Python dependencies
    exit /b 1
)
echo [OK] Python dependencies installed
echo.

echo [2/4] Installing TopSpin API package...
REM Install TopSpin API from TopSpin installation directory
if exist "D:\topspin\python\examples\bruker_nmr_api-2.1.0-py3-none-any.whl" (
    uv pip install "D:\topspin\python\examples\bruker_nmr_api-2.1.0-py3-none-any.whl"
    if %errorlevel% neq 0 (
        echo [ERROR] Failed to install TopSpin API package
        exit /b 1
    )
    echo [OK] TopSpin API package installed
) else (
    echo [WARNING] TopSpin API package not found at D:\topspin\python\examples\
    echo Please ensure TopSpin is installed at D:\topspin
    echo Or modify the path in this script to match your TopSpin installation.
)
echo.

echo [3/4] Creating example pulse sequence for testing...
if not exist "test_pulseprogram" mkdir test_pulseprogram

echo ========================================
echo Installation completed successfully!
echo ========================================
echo.
echo Next steps:
echo   1. Activate the virtual environment:
echo      .venv\Scripts\activate
echo.
echo   2. Test the installation:
echo      python topspin_api.py
echo.
echo   3. Run examples:
echo      python example_pulse_sequence.py
echo.
echo   4. Open a pulse sequence:
echo      python example_pulse_sequence.py D:\topspin\examdata\Cyclosporine\1\pulseprogram
echo.