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+pyo3 = { version = "0.24.1", features = ["extension-module"] } +tokio = { version = "1.46.1", features = ["rt"] } + + +[build-dependencies] +pyo3-build-config = "0.24" + +# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html +[lib] +name = "xarray_sql" +crate-type = ["cdylib", "rlib"] diff --git a/pyproject.toml b/pyproject.toml index 8766a925..216458a8 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,3 +1,7 @@ +[build-system] +requires = ["maturin>=1.9,<2.0"] +build-backend = "maturin" + [project] name = "xarray_sql" dynamic = ["version"] @@ -22,11 +26,15 @@ classifiers = [ "Programming Language :: Python :: 3.11", "Programming Language :: Python :: 3.12", "Programming Language :: Python :: 3.13", + "Programming Language :: Rust", + "Programming Language :: Python :: Implementation :: CPython", + "Programming Language :: Python :: Implementation :: PyPy", "Topic :: Scientific/Engineering :: Atmospheric Science", "Topic :: Database :: Front-Ends", ] dependencies = [ - "datafusion>=47.0.0", + "dask>=2024.8.0", + "datafusion==49.0.0", # This needs to match the cargo datafusion version!! "xarray>=2024.7.0", ] @@ -35,16 +43,15 @@ test = [ "pytest", "xarray[io]", "gcsfs", - "dask>=2024.8.0", ] [project.urls] Homepage = "https://github.com/alxmrs/xarray-sql" Issues = "https://github.com/alxmrs/xarray-sql/issues" -[build-system] -requires = ["setuptools>=64", "setuptools_scm>=8"] -build-backend = "setuptools.build_meta" +[tool.maturin] +features = ["pyo3/extension-module"] +module-name = "xarray_sql._native" [tool.setuptools.packages.find] exclude = ["demo", "perf_tests"] @@ -83,7 +90,5 @@ dev = [ "xarray_sql[test]", "py-spy>=0.4.0", "pyink>=24.10.1", - "mypy>=1.11.0", - "pre-commit>=3.0.0", - "pandas-stubs>=2.2.2.240807", + "maturin>=1.9.1", ] diff --git a/src/lib.rs b/src/lib.rs new file mode 100644 index 00000000..693b1281 --- /dev/null +++ b/src/lib.rs @@ -0,0 +1,244 @@ +// Licensed under the Apache License, Version 2.0 +//! +//! Lazy Arrow stream table provider for xarray-sql. +//! +//! This module provides `LazyArrowStreamTable`, which wraps a Python object +//! implementing `__arrow_c_stream__` and exposes it as a DataFusion TableProvider +//! via the `__datafusion_table_provider__` protocol. +//! +//! The key feature is **lazy evaluation**: data is not read from the Python stream +//! until query execution time (during `collect()`), not at registration time. + +use std::ffi::c_void; +use std::ffi::CString; +use std::fmt::Debug; +use std::sync::Arc; + +use arrow::array::RecordBatch; +use arrow::datatypes::SchemaRef; +use arrow::ffi_stream::ArrowArrayStreamReader; +use arrow::pyarrow::FromPyArrow; +use datafusion::catalog::streaming::StreamingTable; +use datafusion::datasource::TableProvider; +use datafusion::execution::TaskContext; +use datafusion::physical_plan::memory::MemoryStream; +use datafusion::physical_plan::streaming::PartitionStream; +use datafusion::physical_plan::SendableRecordBatchStream; +use datafusion_ffi::table_provider::FFI_TableProvider; +use pyo3::prelude::*; +use pyo3::types::PyCapsule; +use tokio::runtime::Handle; + +/// A partition stream that wraps a Python factory function that creates streams. +/// +/// The factory is called lazily on each `execute()` invocation, allowing +/// the same table to be queried multiple times. +struct PyArrowStreamPartition { + schema: SchemaRef, + /// A Python callable (factory) that returns a fresh stream implementing `__arrow_c_stream__`. + /// Called on each execute() to create a new stream. + stream_factory: Py, +} + +impl PyArrowStreamPartition { + fn new(stream_factory: Py, schema: SchemaRef) -> Self { + Self { + schema, + stream_factory, + } + } +} + +impl Debug for PyArrowStreamPartition { + fn fmt(&self, f: &mut std::fmt::Formatter<'_>) -> std::fmt::Result { + f.debug_struct("PyArrowStreamPartition") + .field("schema", &self.schema) + .finish() + } +} + +impl PartitionStream for PyArrowStreamPartition { + fn schema(&self) -> &SchemaRef { + &self.schema + } + + fn execute(&self, _ctx: Arc) -> SendableRecordBatchStream { + // Call the factory to get a fresh stream for this execution + let batches: Vec = Python::with_gil(|py| { + // Call the factory to get a fresh stream + let stream_result = self.stream_factory.call0(py); + + match stream_result { + Ok(stream_obj) => { + let bound = stream_obj.bind(py); + + match ArrowArrayStreamReader::from_pyarrow_bound(bound) { + Ok(reader) => { + // Collect batches, propagating errors as warnings + // In streaming context, we can't easily return errors, + // so we log and skip failed batches + reader + .filter_map(|result| match result { + Ok(batch) => Some(batch), + Err(e) => { + eprintln!("Warning: Failed to read batch: {e}"); + None + } + }) + .collect() + } + Err(e) => { + eprintln!("Warning: Failed to create stream reader: {e}"); + vec![] + } + } + } + Err(e) => { + eprintln!("Warning: Failed to call stream factory: {e}"); + vec![] + } + } + }); + + Box::pin( + MemoryStream::try_new(batches, Arc::clone(&self.schema), None) + .expect("MemoryStream creation should not fail with valid schema"), + ) + } +} + +/// A lazy table provider that wraps a Python stream factory. +/// +/// This class implements the `__datafusion_table_provider__` protocol, allowing +/// it to be registered with DataFusion's `SessionContext.register_table()`. +/// +/// Data is NOT read until query execution time - this enables true lazy evaluation. +/// The factory function is called on each query execution to create a fresh stream, +/// allowing the same table to be queried multiple times. +/// +/// # Example +/// +/// ```python +/// from datafusion import SessionContext +/// from xarray_sql import LazyArrowStreamTable, XarrayRecordBatchReader +/// +/// # Create a factory that produces lazy readers +/// def make_reader(): +/// return XarrayRecordBatchReader(ds, chunks={'time': 240}) +/// +/// # Get schema from a sample reader +/// sample = make_reader() +/// schema = sample.schema +/// +/// # Wrap factory in lazy table - NO DATA LOADED +/// table = LazyArrowStreamTable(make_reader, schema) +/// +/// # Register with DataFusion - STILL NO DATA LOADED +/// ctx = SessionContext() +/// ctx.register_table("air", table) +/// +/// # Data only loaded HERE during collect() +/// # Each query creates a fresh stream via the factory +/// result = ctx.sql("SELECT AVG(air) FROM air").collect() +/// result2 = ctx.sql("SELECT * FROM air LIMIT 10").collect() # Works! +/// ``` +#[pyclass(name = "LazyArrowStreamTable")] +struct LazyArrowStreamTable { + /// The underlying StreamingTable + table: Arc, +} + +#[pymethods] +impl LazyArrowStreamTable { + /// Create a new LazyArrowStreamTable from a stream factory function. + /// + /// Args: + /// stream_factory: A callable that returns a Python object implementing + /// the Arrow PyCapsule interface (`__arrow_c_stream__`). + /// Called on each query execution to create a fresh stream. + /// schema: A PyArrow Schema for the table. Required since the factory + /// hasn't been called yet. + /// + /// Raises: + /// TypeError: If the schema is not a valid PyArrow Schema. + #[new] + fn new(stream_factory: &Bound<'_, PyAny>, schema: &Bound<'_, PyAny>) -> PyResult { + // Convert the PyArrow schema to Arrow schema + use arrow::datatypes::Schema; + use arrow::pyarrow::FromPyArrow; + + let arrow_schema = Schema::from_pyarrow_bound(schema).map_err(|e| { + pyo3::exceptions::PyTypeError::new_err(format!("Failed to convert schema: {e}")) + })?; + let schema_ref = Arc::new(arrow_schema); + + // Create the partition stream with the factory + let partition = + PyArrowStreamPartition::new(stream_factory.clone().unbind(), schema_ref.clone()); + + // Create the StreamingTable + let table = + StreamingTable::try_new(schema_ref, vec![Arc::new(partition)]).map_err(|e| { + pyo3::exceptions::PyRuntimeError::new_err(format!( + "Failed to create StreamingTable: {e}" + )) + })?; + + Ok(Self { + table: Arc::new(table), + }) + } + + /// Returns a PyCapsule implementing the DataFusion TableProvider FFI. + /// + /// This method is called by DataFusion's `register_table()` to get a + /// foreign table provider that can be used in queries. + fn __datafusion_table_provider__<'py>(&self, py: Python<'py>) -> PyResult> { + // Create the FFI table provider + let provider: Arc = self.table.clone(); + + // Try to get the current tokio runtime handle (available when called from DataFusion context) + let runtime = Handle::try_current().ok(); + + // Create FFI wrapper (v49 API takes 3 arguments) + let ffi_provider = FFI_TableProvider::new( + provider, + false, // can_support_pushdown_filters + runtime, + ); + + // Create the capsule name + let name = CString::new("datafusion_table_provider").unwrap(); + + // Create the PyCapsule with a destructor closure + // The PyCapsule takes ownership of the FFI_TableProvider + PyCapsule::new_with_destructor( + py, + ffi_provider, + Some(name), + |_provider: FFI_TableProvider, _context: *mut c_void| { + // The FFI_TableProvider will be dropped automatically + }, + ) + } + + /// Get the schema of the table as a PyArrow Schema. + fn schema(&self, py: Python<'_>) -> PyResult { + use arrow::pyarrow::ToPyArrow; + self.table.schema().to_pyarrow(py) + } + + fn __repr__(&self) -> String { + format!( + "LazyArrowStreamTable(schema={:?})", + self.table.schema() + ) + } +} + +/// Python module initialization +#[pymodule] +fn _native(m: &Bound<'_, PyModule>) -> PyResult<()> { + m.add_class::()?; + Ok(()) +} diff --git a/uv.lock b/uv.lock index 1369363c..a98c650e 100644 --- a/uv.lock +++ b/uv.lock @@ -241,33 +241,6 @@ wheels = [ { url = "https://files.pythonhosted.org/packages/84/ae/320161bd181fc06471eed047ecce67b693fd7515b16d495d8932db763426/certifi-2025.6.15-py3-none-any.whl", hash = "sha256:2e0c7ce7cb5d8f8634ca55d2ba7e6ec2689a2fd6537d8dec1296a477a4910057", size = 157650, upload-time = "2025-06-15T02:45:49.977Z" }, ] -[[package]] -name = "cfgv" -version = "3.4.0" -source = { registry 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provides XarrayRecordBatchReader, which implements the Arrow +PyCapsule Interface (__arrow_c_stream__) to enable zero-copy, lazy streaming +of xarray data to DataFusion and other Arrow consumers. + +The implementation delegates to PyArrow's RecordBatchReader for the +actual stream implementation, wrapping xarray block iteration in a generator. +""" + +from __future__ import annotations + +import typing as t + +import pyarrow as pa +import xarray as xr + +from .df import Block, Chunks, block_slices, pivot, _parse_schema + +if t.TYPE_CHECKING: + from ._native import LazyArrowStreamTable + + +class XarrayRecordBatchReader: + """A lazy Arrow stream reader for xarray Datasets. + + Implements the Arrow PyCapsule Interface (__arrow_c_stream__) to enable + zero-copy, lazy streaming of xarray data to DataFusion and other Arrow + consumers. + + The key property is that xarray blocks are only converted to Arrow + RecordBatches when the consumer calls get_next (e.g., during DataFusion's + collect()), NOT when the reader is created or registered. + + Attributes: + schema: The Arrow schema for the stream. + + Example: + >>> import xarray as xr + >>> from xarray_sql import XarrayRecordBatchReader + >>> ds = xr.tutorial.open_dataset('air_temperature') + >>> reader = XarrayRecordBatchReader(ds, chunks={'time': 240}) + >>> # At this point, NO data has been read from xarray + >>> # Data is only read when consumed: + >>> import pyarrow as pa + >>> pa_reader = pa.RecordBatchReader.from_stream(reader) + >>> for batch in pa_reader: + ... print(batch.num_rows) # Data read here + """ + + def __init__( + self, + ds: xr.Dataset, + chunks: Chunks = None, + *, + _iteration_callback: t.Optional[t.Callable[[Block], None]] = None, + ): + """Initialize the lazy reader. + + Args: + ds: An xarray Dataset. All data_vars must share the same dimensions. + chunks: Xarray-like chunks specification. If not provided, uses + the Dataset's existing chunks. + _iteration_callback: Internal callback for testing. Called with + each block dict just before it's converted to Arrow. This + allows tests to track when iteration actually occurs. + """ + self._ds = ds + self._chunks = chunks + self._schema = _parse_schema(ds) + self._iteration_callback = _iteration_callback + self._consumed = False + + # Validate dimensions + fst = next(iter(ds.values())).dims + if not all(da.dims == fst for da in ds.values()): + raise ValueError( + "All dimensions must be equal. Please filter data_vars in the Dataset." + ) + + @property + def schema(self) -> pa.Schema: + """The Arrow schema for this stream.""" + return self._schema + + def _generate_batches(self) -> t.Iterator[pa.RecordBatch]: + """Generate RecordBatches lazily from xarray blocks. + + This generator is only consumed when the Arrow stream's get_next + is called, ensuring true lazy evaluation. + """ + for block in block_slices(self._ds, self._chunks): + # Call the iteration callback if provided (for testing) + if self._iteration_callback is not None: + self._iteration_callback(block) + + # Convert this block to a RecordBatch + df = pivot(self._ds.isel(block)) + yield pa.RecordBatch.from_pandas(df, schema=self._schema) + + def __arrow_c_stream__( + self, requested_schema: t.Optional[object] = None + ) -> object: + """Export as Arrow C Stream via PyCapsule. + + This method is called by Arrow consumers (like DataFusion) to get + a C-level stream interface. The actual data iteration only begins + when the consumer calls get_next on the stream. + + Args: + requested_schema: Optional schema for type casting. Currently + passed through to PyArrow's implementation. + + Returns: + PyCapsule containing ArrowArrayStream pointer with name + "arrow_array_stream". + + Raises: + RuntimeError: If the stream has already been consumed. + """ + if self._consumed: + raise RuntimeError( + "Stream already consumed. XarrayRecordBatchReader can only " + "be iterated once. Create a new reader for additional iterations." + ) + self._consumed = True + + # Create a PyArrow RecordBatchReader from our generator + # The generator is NOT consumed here - only when get_next is called + reader = pa.RecordBatchReader.from_batches( + self._schema, self._generate_batches() + ) + + # Delegate to PyArrow's __arrow_c_stream__ implementation + return reader.__arrow_c_stream__(requested_schema) + + def __arrow_c_schema__( + self, requested_schema: t.Optional[object] = None + ) -> object: + """Export the schema as Arrow C Schema via PyCapsule. + + This allows consumers to inspect the schema without consuming the stream. + + Args: + requested_schema: Optional schema for negotiation (unused). + + Returns: + PyCapsule containing ArrowSchema pointer. + """ + return self._schema.__arrow_c_schema__() + + +def read_xarray_lazy( + ds: xr.Dataset, chunks: Chunks = None +) -> XarrayRecordBatchReader: + """Create a lazy Arrow stream reader from an xarray Dataset. + + This is the recommended way to register xarray data with DataFusion + for lazy evaluation. Data is only read when queries are executed + (e.g., during collect()), not during registration. + + Args: + ds: An xarray Dataset. All data_vars must share the same dimensions. + chunks: Xarray-like chunks specification. If not provided, uses + the Dataset's existing chunks. + + Returns: + An XarrayRecordBatchReader that implements __arrow_c_stream__. + + Example: + >>> from datafusion import SessionContext + >>> import xarray as xr + >>> from xarray_sql import read_xarray_lazy, LazyArrowStreamTable + >>> + >>> ds = xr.tutorial.open_dataset('air_temperature') + >>> reader = read_xarray_lazy(ds, chunks={'time': 240}) + >>> table = LazyArrowStreamTable(reader) + >>> + >>> ctx = SessionContext() + >>> ctx.register_table_provider('air', table) + >>> + >>> # Data is only read here, during collect() + >>> result = ctx.sql('SELECT AVG(air) FROM air').collect() + """ + return XarrayRecordBatchReader(ds, chunks) + + +def read_xarray_table( + ds: xr.Dataset, + chunks: Chunks = None, + *, + _iteration_callback: t.Optional[t.Callable[[Block], None]] = None, +) -> "LazyArrowStreamTable": + """Create a lazy DataFusion table from an xarray Dataset. + + This is the simplest way to register xarray data with DataFusion. + Data is only read when queries are executed (during collect()), + not during registration. The table can be queried multiple times. + + Args: + ds: An xarray Dataset. All data_vars must share the same dimensions. + chunks: Xarray-like chunks specification. If not provided, uses + the Dataset's existing chunks. + _iteration_callback: Internal callback for testing. Called with + each block dict just before it's converted to Arrow. + + Returns: + A LazyArrowStreamTable ready for registration with DataFusion. + + Example: + >>> from datafusion import SessionContext + >>> import xarray as xr + >>> from xarray_sql import read_xarray_table + >>> + >>> ds = xr.tutorial.open_dataset('air_temperature') + >>> table = read_xarray_table(ds, chunks={'time': 240}) + >>> + >>> ctx = SessionContext() + >>> ctx.register_table_provider('air', table) + >>> + >>> # Data is only read here, during collect() + >>> result = ctx.sql('SELECT AVG(air) FROM air').collect() + >>> # Can query again - each query creates a fresh stream + >>> result2 = ctx.sql('SELECT * FROM air LIMIT 10').collect() + """ + from ._native import LazyArrowStreamTable + + # Get schema from dataset without creating a stream + schema = _parse_schema(ds) + + # Create a factory function that produces fresh streams on each call + def make_stream() -> XarrayRecordBatchReader: + return XarrayRecordBatchReader( + ds, chunks, _iteration_callback=_iteration_callback + ) + + return LazyArrowStreamTable(make_stream, schema) diff --git a/xarray_sql/reader_test.py b/xarray_sql/reader_test.py new file mode 100644 index 00000000..a00a15e6 --- /dev/null +++ b/xarray_sql/reader_test.py @@ -0,0 +1,453 @@ +"""Tests for XarrayRecordBatchReader lazy streaming behavior. + +These tests verify that XarrayRecordBatchReader provides true lazy evaluation: +- No data iteration during reader creation +- No data iteration during DataFusion table registration (using LazyArrowStreamTable) +- Data iteration ONLY occurs during query execution (collect()) + +The lazy streaming is achieved via the Rust LazyArrowStreamTable class which +implements the __datafusion_table_provider__ protocol using StreamingTable. +""" + +import numpy as np +import pandas as pd +import pyarrow as pa +import pytest +import xarray as xr +from datafusion import SessionContext + +from ._native import LazyArrowStreamTable +from .reader import XarrayRecordBatchReader, read_xarray_lazy, read_xarray_table + + +@pytest.fixture +def small_ds(): + """Create a small dataset for testing.""" + np.random.seed(42) + time = pd.date_range("2020-01-01", periods=100, freq="h") + lat = np.linspace(-90, 90, 10) + lon = np.linspace(-180, 180, 10) + + data = np.random.rand(100, 10, 10).astype(np.float32) + + return xr.Dataset( + {"temperature": (["time", "lat", "lon"], data)}, + coords={"time": time, "lat": lat, "lon": lon}, + ) + + +class IterationTracker: + """Tracks when iteration occurs for testing lazy evaluation.""" + + def __init__(self): + self.iteration_count = 0 + self.blocks_seen = [] + + def __call__(self, block): + self.iteration_count += 1 + self.blocks_seen.append(block) + + def reset(self): + self.iteration_count = 0 + self.blocks_seen = [] + + +class TestXarrayRecordBatchReaderCreation: + """Tests that reader creation does NOT trigger data iteration.""" + + def test_reader_creation_does_not_iterate(self, small_ds): + """Creating a reader should NOT iterate through any data.""" + tracker = IterationTracker() + + reader = XarrayRecordBatchReader( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + assert tracker.iteration_count == 0, ( + f"Expected 0 iterations during reader creation, " + f"but got {tracker.iteration_count}" + ) + + def test_read_xarray_lazy_does_not_iterate(self, small_ds): + """read_xarray_lazy() should NOT iterate through any data.""" + # We can't use the callback with the public API, but we can verify + # basic behavior - no exceptions and no data loaded + reader = read_xarray_lazy(small_ds, chunks={"time": 25}) + + assert reader is not None + assert reader.schema is not None + assert not reader._consumed + + def test_schema_access_does_not_iterate(self, small_ds): + """Accessing the schema should NOT trigger iteration.""" + tracker = IterationTracker() + + reader = XarrayRecordBatchReader( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + # Access schema + _ = reader.schema + _ = reader.__arrow_c_schema__() + + assert tracker.iteration_count == 0, ( + f"Expected 0 iterations when accessing schema, " + f"but got {tracker.iteration_count}" + ) + + +class TestDataFusionRegistration: + """Tests that DataFusion table registration does NOT trigger iteration. + + These tests use read_xarray_table with register_table_provider() + to achieve true lazy evaluation. + """ + + def test_register_table_does_not_iterate(self, small_ds): + """Registering a LazyArrowStreamTable should NOT iterate data. + + This is the KEY test for lazy evaluation. LazyArrowStreamTable wraps + a factory and implements __datafusion_table_provider__ with StreamingTable, + ensuring data is only read during query execution. + """ + tracker = IterationTracker() + + # Use read_xarray_table which creates a factory-based table + table = read_xarray_table( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + assert tracker.iteration_count == 0, ( + f"LAZY EVALUATION FAILED: Expected 0 iterations during " + f"register_table_provider(), but got {tracker.iteration_count}." + ) + + def test_lazy_table_creation_does_not_iterate(self, small_ds): + """Creating a LazyArrowStreamTable should NOT iterate data.""" + tracker = IterationTracker() + + # Use read_xarray_table which creates a factory-based table + table = read_xarray_table( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + assert tracker.iteration_count == 0, ( + f"LAZY EVALUATION FAILED: Expected 0 iterations during " + f"LazyArrowStreamTable creation, but got {tracker.iteration_count}." + ) + + def test_sql_planning_does_not_iterate(self, small_ds): + """Creating a SQL query plan should NOT iterate data.""" + tracker = IterationTracker() + + table = read_xarray_table( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + # Create a query but don't execute it + query = ctx.sql("SELECT AVG(temperature) FROM test_table") + + # Just creating the query shouldn't iterate + assert tracker.iteration_count == 0, ( + f"Expected 0 iterations during SQL planning, " + f"but got {tracker.iteration_count}. " + f"DataFusion may be scanning data during query planning." + ) + + +class TestDataFusionCollect: + """Tests that data iteration ONLY occurs during collect(). + + These tests use read_xarray_table to verify lazy evaluation. + """ + + def test_collect_triggers_iteration(self, small_ds): + """collect() should trigger data iteration.""" + tracker = IterationTracker() + + table = read_xarray_table( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + # Verify no iteration yet (lazy registration) + iteration_before_collect = tracker.iteration_count + assert ( + iteration_before_collect == 0 + ), "Should have 0 iterations before collect" + + # Now collect - this SHOULD iterate + result = ctx.sql("SELECT * FROM test_table LIMIT 10").collect() + + assert tracker.iteration_count > 0, ( + f"Expected iterations during collect(), but got 0. " + f"Data was never read!" + ) + assert ( + tracker.iteration_count > iteration_before_collect + ), f"Expected more iterations after collect()" + + def test_full_query_iterates_all_blocks(self, small_ds): + """A query that reads all data should iterate all blocks.""" + tracker = IterationTracker() + + chunks = {"time": 25} + table = read_xarray_table( + small_ds, + chunks=chunks, + _iteration_callback=tracker, + ) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + # Run a query that needs to scan all data + result = ctx.sql("SELECT COUNT(*) FROM test_table").collect() + + # With time=100 and chunks=25, we expect 4 blocks + expected_blocks = 100 // 25 + assert tracker.iteration_count == expected_blocks, ( + f"Expected {expected_blocks} block iterations, " + f"but got {tracker.iteration_count}" + ) + + def test_aggregation_query_iterates_correctly(self, small_ds): + """Aggregation queries should iterate all necessary blocks.""" + tracker = IterationTracker() + + table = read_xarray_table( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + # Run aggregation + result = ctx.sql( + "SELECT lat, AVG(temperature) as avg_temp " + "FROM test_table GROUP BY lat" + ).collect() + + # Should have iterated some blocks + assert tracker.iteration_count > 0 + assert len(result) > 0 + + +class TestLazyEvaluationEndToEnd: + """End-to-end tests verifying lazy evaluation through the full pipeline. + + These tests use read_xarray_table to achieve true lazy evaluation. + """ + + def test_lazy_evaluation_sequence(self, small_ds): + """Verify the exact sequence of lazy evaluation stages. + + This is the comprehensive test that proves true lazy evaluation: + 1. Table creation: 0 iterations + 2. Table registration: 0 iterations + 3. Query planning: 0 iterations + 4. collect(): N iterations (where N = number of blocks) + """ + tracker = IterationTracker() + + # Stage 1: Table creation (with factory) + table = read_xarray_table( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + iterations_after_table = tracker.iteration_count + assert iterations_after_table == 0, ( + f"Stage 1 FAILED: Table creation triggered " + f"{iterations_after_table} iterations" + ) + + # Stage 2: Table registration + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + iterations_after_registration = tracker.iteration_count + assert iterations_after_registration == 0, ( + f"Stage 2 FAILED: Table registration triggered " + f"{iterations_after_registration} iterations" + ) + + # Stage 3: Query planning + query = ctx.sql("SELECT * FROM test_table") + iterations_after_planning = tracker.iteration_count + assert iterations_after_planning == 0, ( + f"Stage 3 FAILED: Query planning triggered " + f"{iterations_after_planning} iterations" + ) + + # Stage 4: collect() - NOW iteration should happen + result = query.collect() + iterations_after_collect = tracker.iteration_count + assert ( + iterations_after_collect > 0 + ), f"Stage 4 FAILED: collect() triggered 0 iterations - no data was read!" + + # Verify we got the expected number of blocks (100 time steps / 25 = 4) + expected_blocks = 4 + assert ( + iterations_after_collect == expected_blocks + ), f"Expected {expected_blocks} iterations, got {iterations_after_collect}" + + def test_multiple_queries_on_same_table(self, small_ds): + """Same table can be queried multiple times with fresh iteration each time.""" + tracker = IterationTracker() + + table = read_xarray_table( + small_ds, + chunks={"time": 50}, + _iteration_callback=tracker, + ) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + # First query + ctx.sql("SELECT COUNT(*) FROM test_table").collect() + first_query_iterations = tracker.iteration_count + assert first_query_iterations > 0, "First query should iterate" + + # Second query on same table - should iterate again + ctx.sql("SELECT AVG(temperature) FROM test_table").collect() + second_query_iterations = tracker.iteration_count + assert second_query_iterations > first_query_iterations, ( + "Second query should trigger additional iterations" + ) + + def test_stream_consumed_error(self, small_ds): + """Once consumed, a single XarrayRecordBatchReader should not be reusable.""" + reader = XarrayRecordBatchReader(small_ds, chunks={"time": 25}) + + # Consume the reader by converting to a PyArrow reader and reading + import pyarrow as pa + pa_reader = pa.RecordBatchReader.from_stream(reader) + _ = pa_reader.read_all() + + # Reader is now consumed, calling __arrow_c_stream__ again should fail + with pytest.raises(RuntimeError, match="already consumed"): + reader.__arrow_c_stream__() + + +class TestDataIntegrity: + """Tests that verify data correctness alongside lazy evaluation. + + These tests use read_xarray_table for lazy streaming. + """ + + def test_query_results_are_correct(self, small_ds): + """Verify that lazy evaluation produces correct results.""" + table = read_xarray_table(small_ds, chunks={"time": 25}) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + # Get count + result = ctx.sql("SELECT COUNT(*) as cnt FROM test_table").collect() + count = result[0].to_pandas()["cnt"].iloc[0] + + # Expected: 100 time steps * 10 lat * 10 lon = 10,000 rows + expected_count = 100 * 10 * 10 + assert ( + count == expected_count + ), f"Expected {expected_count} rows, got {count}" + + def test_aggregation_results_are_correct(self, small_ds): + """Verify aggregation produces correct results.""" + table = read_xarray_table(small_ds, chunks={"time": 25}) + + ctx = SessionContext() + ctx.register_table_provider("test_table", table) + + # Get average temperature + result = ctx.sql( + "SELECT AVG(temperature) as avg_temp FROM test_table" + ).collect() + avg_temp = result[0].to_pandas()["avg_temp"].iloc[0] + + # With seed 42 and random data in [0, 1), average should be ~0.5 + assert ( + 0.4 < avg_temp < 0.6 + ), f"Expected average temperature ~0.5, got {avg_temp}" + + +class TestPyArrowInterop: + """Tests for PyArrow interoperability.""" + + def test_from_stream_does_not_iterate(self, small_ds): + """pa.RecordBatchReader.from_stream() should not iterate.""" + tracker = IterationTracker() + + reader = XarrayRecordBatchReader( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + # Create PyArrow reader from our stream + pa_reader = pa.RecordBatchReader.from_stream(reader) + + assert tracker.iteration_count == 0, ( + f"Expected 0 iterations when creating PyArrow reader, " + f"but got {tracker.iteration_count}" + ) + + def test_pyarrow_iteration_triggers_callbacks(self, small_ds): + """Iterating via PyArrow should trigger our callbacks.""" + tracker = IterationTracker() + + reader = XarrayRecordBatchReader( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + pa_reader = pa.RecordBatchReader.from_stream(reader) + + # Now iterate + for batch in pa_reader: + pass + + assert ( + tracker.iteration_count == 4 + ), f"Expected 4 iterations, got {tracker.iteration_count}" + + def test_read_all_iterates_all(self, small_ds): + """read_all() should iterate through all blocks.""" + tracker = IterationTracker() + + reader = XarrayRecordBatchReader( + small_ds, + chunks={"time": 25}, + _iteration_callback=tracker, + ) + + pa_reader = pa.RecordBatchReader.from_stream(reader) + table = pa_reader.read_all() + + assert tracker.iteration_count == 4 + assert len(table) == 100 * 10 * 10 diff --git a/xarray_sql/sql.py b/xarray_sql/sql.py index 11553b99..851fd0c5 100644 --- a/xarray_sql/sql.py +++ b/xarray_sql/sql.py @@ -1,7 +1,8 @@ import xarray as xr from datafusion import SessionContext -from .df import read_xarray, Chunks +from .df import Chunks +from .reader import read_xarray_table class XarrayContext(SessionContext): @@ -13,5 +14,5 @@ def from_dataset( input_table: xr.Dataset, chunks: Chunks = None, ): - arrow_table = read_xarray(input_table, chunks) - return self.from_arrow(arrow_table, table_name) + table = read_xarray_table(input_table, chunks) + self.register_table_provider(table_name, table)