From 5f9d1865c34b9437857db90b85804835d1ae0f10 Mon Sep 17 00:00:00 2001
From: Alex Merose <al@merose.com>
Date: Sun, 18 Feb 2024 17:36:18 +0700
Subject: [PATCH 1/3] Found bug: Opening ERA5 takes longer than expected.

It should return right away since we want to convert chunks lazily. From the profile traces, it looks like `to_dd` converts the chunks right away.
---
 perf_tests/open_era5.py                       |  13 +
 ...open_era5.py-2024-02-18T17:21:44+07:00.svg | 415 ++++++++++++++++++
 ...open_era5.py-2024-02-18T17:33:02+07:00.svg | 415 ++++++++++++++++++
 qarray/df.py                                  |  10 +-
 qarray/df_test.py                             |   8 +
 setup.py                                      |   3 +-
 6 files changed, 862 insertions(+), 2 deletions(-)
 create mode 100755 perf_tests/open_era5.py
 create mode 100644 perf_tests/open_era5.py-2024-02-18T17:21:44+07:00.svg
 create mode 100644 perf_tests/open_era5.py-2024-02-18T17:33:02+07:00.svg

diff --git a/perf_tests/open_era5.py b/perf_tests/open_era5.py
new file mode 100755
index 00000000..e79e402d
--- /dev/null
+++ b/perf_tests/open_era5.py
@@ -0,0 +1,13 @@
+#!/usr/bin/env python3
+
+import xarray as xr
+import qarray as qr
+
+# Requires authenticating with GCP
+era5_ds = xr.open_zarr(
+  'gs://gcp-public-data-arco-era5/ar/1959-2022-full_37-1h-0p25deg-chunk-1.zarr-v2',
+  chunks={'time': 240, 'level': 1}
+)
+era5_wind_df = qr.to_dd(era5_ds[['u_component_of_wind', 'v_component_of_wind']])
+
+print(len(era5_wind_df))
\ No newline at end of file
diff --git a/perf_tests/open_era5.py-2024-02-18T17:21:44+07:00.svg b/perf_tests/open_era5.py-2024-02-18T17:21:44+07:00.svg
new file mode 100644
index 00000000..a0f598ac
--- /dev/null
+++ b/perf_tests/open_era5.py-2024-02-18T17:21:44+07:00.svg
@@ -0,0 +1,415 @@
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+text { font-family:"Verdana"; font-size:12px; fill:rgb(0,0,0); }
+#title { text-anchor:middle; font-size:17px; }
+#matched { text-anchor:end; }
+#search { text-anchor:end; opacity:0.1; cursor:pointer; }
+#search:hover, #search.show { opacity:1; }
+#subtitle { text-anchor:middle; font-color:rgb(160,160,160); }
+#unzoom { cursor:pointer; }
+#frames > *:hover { stroke:black; stroke-width:0.5; cursor:pointer; }
+.hide { display:none; }
+.parent { opacity:0.5; }
+</style><script type="text/ecmascript"><![CDATA[
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+        var fontsize = 12;
+        var fontwidth = 0.59;
+        var xpad = 10;
+        var inverted = true;
+        var searchcolor = 'rgb(230,0,230)';
+        var fluiddrawing = true;
+        var truncate_text_right = false;
+    ]]><![CDATA["use strict";
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+    unzoombtn = document.getElementById("unzoom");
+    matchedtxt = document.getElementById("matched");
+    svg = document.getElementsByTagName("svg")[0];
+    frames = document.getElementById("frames");
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+        history.replaceState(null, null, parse_params(params));
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+    else if (e.target.id == "search") search_prompt();
+}, false)
+// mouse-over for info
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+window.addEventListener("mouseover", function(e) {
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+        params[tmp[0]]  = decodeURIComponent(tmp[1]);
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+    return params;
+}
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+    if (uri == '?')
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+    return uri;
+}
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+    var children = node.querySelectorAll(selector);
+    if (children.length) return children[0];
+    return;
+}
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+    var parent = node.parentElement;
+    if (!parent) return;
+    if (parent.id == "frames") return node;
+    return find_group(parent);
+}
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+}
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+}
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+    return (text)
+}
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+}
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+                return;
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+}
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+    }
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+    delete params.s;
+    history.replaceState(null, null, parse_params(params));
+}
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+        searching = 0;
+        searchbtn.classList.remove("show");
+        searchbtn.firstChild.nodeValue = "Search"
+        matchedtxt.classList.add("hide");
+        matchedtxt.firstChild.nodeValue = ""
+    }
+}
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+    var matches = new Object();
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+        }
+        var func = g_to_func(e);
+        var rect = find_child(e, "rect");
+        if (func == null || rect == null)
+            continue;
+        // Save max width. Only works as we have a root frame
+        var w = parseInt(rect.attributes["fg:w"].value);
+        if (w > maxwidth)
+            maxwidth = w;
+        if (func.match(re)) {
+            // highlight
+            var x = parseInt(rect.attributes["fg:x"].value);
+            orig_save(rect, "fill");
+            rect.attributes.fill.value = searchcolor;
+            // remember matches
+            if (matches[x] == undefined) {
+                matches[x] = w;
+            } else {
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+                    // overwrite with parent
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+            searching = 1;
+        }
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+    params.s = term;
+    history.replaceState(null, null, parse_params(params));
+
+    searchbtn.classList.add("show");
+    searchbtn.firstChild.nodeValue = "Reset Search";
+    // calculate percent matched, excluding vertical overlap
+    var count = 0;
+    var lastx = -1;
+    var lastw = 0;
+    var keys = Array();
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+    var pct = 100 * count / maxwidth;
+    if (pct != 100) pct = pct.toFixed(1);
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+}
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+}
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+// event listeners
+window.addEventListener("click", function(e) {
+    var target = find_group(e.target);
+    if (target) {
+        if (target.nodeName == "a") {
+            if (e.ctrlKey === false) return;
+            e.preventDefault();
+        }
+        if (target.classList.contains("parent")) unzoom();
+        zoom(target);
+
+        // set parameters for zoom state
+        var el = target.querySelector("rect");
+        if (el && el.attributes && el.attributes.y && el.attributes["fg:x"]) {
+            var params = get_params()
+            params.x = el.attributes["fg:x"].value;
+            params.y = el.attributes.y.value;
+            history.replaceState(null, null, parse_params(params));
+        }
+    }
+    else if (e.target.id == "unzoom") {
+        unzoom();
+
+        // remove zoom state
+        var params = get_params();
+        if (params.x) delete params.x;
+        if (params.y) delete params.y;
+        history.replaceState(null, null, parse_params(params));
+    }
+    else if (e.target.id == "search") search_prompt();
+}, false)
+// mouse-over for info
+// show
+window.addEventListener("mouseover", function(e) {
+    var target = find_group(e.target);
+    if (target) details.nodeValue = nametype + " " + g_to_text(target);
+}, false)
+// clear
+window.addEventListener("mouseout", function(e) {
+    var target = find_group(e.target);
+    if (target) details.nodeValue = ' ';
+}, false)
+// ctrl-F for search
+window.addEventListener("keydown",function (e) {
+    if (e.keyCode === 114 || (e.ctrlKey && e.keyCode === 70)) {
+        e.preventDefault();
+        search_prompt();
+    }
+}, false)
+// functions
+function get_params() {
+    var params = {};
+    var paramsarr = window.location.search.substr(1).split('&');
+    for (var i = 0; i < paramsarr.length; ++i) {
+        var tmp = paramsarr[i].split("=");
+        if (!tmp[0] || !tmp[1]) continue;
+        params[tmp[0]]  = decodeURIComponent(tmp[1]);
+    }
+    return params;
+}
+function parse_params(params) {
+    var uri = "?";
+    for (var key in params) {
+        uri += key + '=' + encodeURIComponent(params[key]) + '&';
+    }
+    if (uri.slice(-1) == "&")
+        uri = uri.substring(0, uri.length - 1);
+    if (uri == '?')
+        uri = window.location.href.split('?')[0];
+    return uri;
+}
+function find_child(node, selector) {
+    var children = node.querySelectorAll(selector);
+    if (children.length) return children[0];
+    return;
+}
+function find_group(node) {
+    var parent = node.parentElement;
+    if (!parent) return;
+    if (parent.id == "frames") return node;
+    return find_group(parent);
+}
+function orig_save(e, attr, val) {
+    if (e.attributes["fg:orig_" + attr] != undefined) return;
+    if (e.attributes[attr] == undefined) return;
+    if (val == undefined) val = e.attributes[attr].value;
+    e.setAttribute("fg:orig_" + attr, val);
+}
+function orig_load(e, attr) {
+    if (e.attributes["fg:orig_"+attr] == undefined) return;
+    e.attributes[attr].value = e.attributes["fg:orig_" + attr].value;
+    e.removeAttribute("fg:orig_" + attr);
+}
+function g_to_text(e) {
+    var text = find_child(e, "title").firstChild.nodeValue;
+    return (text)
+}
+function g_to_func(e) {
+    var func = g_to_text(e);
+    // if there's any manipulation we want to do to the function
+    // name before it's searched, do it here before returning.
+    return (func);
+}
+function update_text(e) {
+    var r = find_child(e, "rect");
+    var t = find_child(e, "text");
+    var w = parseFloat(r.attributes.width.value) * frames.attributes.width.value / 100 - 3;
+    var txt = find_child(e, "title").textContent.replace(/\([^(]*\)$/,"");
+    t.attributes.x.value = format_percent((parseFloat(r.attributes.x.value) + (100 * 3 / frames.attributes.width.value)));
+    // Smaller than this size won't fit anything
+    if (w < 2 * fontsize * fontwidth) {
+        t.textContent = "";
+        return;
+    }
+    t.textContent = txt;
+    // Fit in full text width
+    if (/^ *\$/.test(txt) || t.getComputedTextLength() < w)
+        return;
+    if (truncate_text_right) {
+        // Truncate the right side of the text.
+        for (var x = txt.length - 2; x > 0; x--) {
+            if (t.getSubStringLength(0, x + 2) <= w) {
+                t.textContent = txt.substring(0, x) + "..";
+                return;
+            }
+        }
+    } else {
+        // Truncate the left side of the text.
+        for (var x = 2; x < txt.length; x++) {
+            if (t.getSubStringLength(x - 2, txt.length) <= w) {
+                t.textContent = ".." + txt.substring(x, txt.length);
+                return;
+            }
+        }
+    }
+    t.textContent = "";
+}
+// zoom
+function zoom_reset(e) {
+    if (e.tagName == "rect") {
+        e.attributes.x.value = format_percent(100 * parseInt(e.attributes["fg:x"].value) / total_samples);
+        e.attributes.width.value = format_percent(100 * parseInt(e.attributes["fg:w"].value) / total_samples);
+    }
+    if (e.childNodes == undefined) return;
+    for(var i = 0, c = e.childNodes; i < c.length; i++) {
+        zoom_reset(c[i]);
+    }
+}
+function zoom_child(e, x, zoomed_width_samples) {
+    if (e.tagName == "text") {
+        var parent_x = parseFloat(find_child(e.parentNode, "rect[x]").attributes.x.value);
+        e.attributes.x.value = format_percent(parent_x + (100 * 3 / frames.attributes.width.value));
+    } else if (e.tagName == "rect") {
+        e.attributes.x.value = format_percent(100 * (parseInt(e.attributes["fg:x"].value) - x) / zoomed_width_samples);
+        e.attributes.width.value = format_percent(100 * parseInt(e.attributes["fg:w"].value) / zoomed_width_samples);
+    }
+    if (e.childNodes == undefined) return;
+    for(var i = 0, c = e.childNodes; i < c.length; i++) {
+        zoom_child(c[i], x, zoomed_width_samples);
+    }
+}
+function zoom_parent(e) {
+    if (e.attributes) {
+        if (e.attributes.x != undefined) {
+            e.attributes.x.value = "0.0%";
+        }
+        if (e.attributes.width != undefined) {
+            e.attributes.width.value = "100.0%";
+        }
+    }
+    if (e.childNodes == undefined) return;
+    for(var i = 0, c = e.childNodes; i < c.length; i++) {
+        zoom_parent(c[i]);
+    }
+}
+function zoom(node) {
+    var attr = find_child(node, "rect").attributes;
+    var width = parseInt(attr["fg:w"].value);
+    var xmin = parseInt(attr["fg:x"].value);
+    var xmax = xmin + width;
+    var ymin = parseFloat(attr.y.value);
+    unzoombtn.classList.remove("hide");
+    var el = frames.children;
+    for (var i = 0; i < el.length; i++) {
+        var e = el[i];
+        var a = find_child(e, "rect").attributes;
+        var ex = parseInt(a["fg:x"].value);
+        var ew = parseInt(a["fg:w"].value);
+        // Is it an ancestor
+        if (!inverted) {
+            var upstack = parseFloat(a.y.value) > ymin;
+        } else {
+            var upstack = parseFloat(a.y.value) < ymin;
+        }
+        if (upstack) {
+            // Direct ancestor
+            if (ex <= xmin && (ex+ew) >= xmax) {
+                e.classList.add("parent");
+                zoom_parent(e);
+                update_text(e);
+            }
+            // not in current path
+            else
+                e.classList.add("hide");
+        }
+        // Children maybe
+        else {
+            // no common path
+            if (ex < xmin || ex >= xmax) {
+                e.classList.add("hide");
+            }
+            else {
+                zoom_child(e, xmin, width);
+                update_text(e);
+            }
+        }
+    }
+}
+function unzoom() {
+    unzoombtn.classList.add("hide");
+    var el = frames.children;
+    for(var i = 0; i < el.length; i++) {
+        el[i].classList.remove("parent");
+        el[i].classList.remove("hide");
+        zoom_reset(el[i]);
+        update_text(el[i]);
+    }
+}
+// search
+function reset_search() {
+    var el = document.querySelectorAll("#frames rect");
+    for (var i = 0; i < el.length; i++) {
+        orig_load(el[i], "fill")
+    }
+    var params = get_params();
+    delete params.s;
+    history.replaceState(null, null, parse_params(params));
+}
+function search_prompt() {
+    if (!searching) {
+        var term = prompt("Enter a search term (regexp " +
+            "allowed, eg: ^ext4_)", "");
+        if (term != null) {
+            search(term)
+        }
+    } else {
+        reset_search();
+        searching = 0;
+        searchbtn.classList.remove("show");
+        searchbtn.firstChild.nodeValue = "Search"
+        matchedtxt.classList.add("hide");
+        matchedtxt.firstChild.nodeValue = ""
+    }
+}
+function search(term) {
+    var re = new RegExp(term);
+    var el = frames.children;
+    var matches = new Object();
+    var maxwidth = 0;
+    for (var i = 0; i < el.length; i++) {
+        var e = el[i];
+        // Skip over frames which are either not visible, or below the zoomed-to frame
+        if (e.classList.contains("hide") || e.classList.contains("parent")) {
+            continue;
+        }
+        var func = g_to_func(e);
+        var rect = find_child(e, "rect");
+        if (func == null || rect == null)
+            continue;
+        // Save max width. Only works as we have a root frame
+        var w = parseInt(rect.attributes["fg:w"].value);
+        if (w > maxwidth)
+            maxwidth = w;
+        if (func.match(re)) {
+            // highlight
+            var x = parseInt(rect.attributes["fg:x"].value);
+            orig_save(rect, "fill");
+            rect.attributes.fill.value = searchcolor;
+            // remember matches
+            if (matches[x] == undefined) {
+                matches[x] = w;
+            } else {
+                if (w > matches[x]) {
+                    // overwrite with parent
+                    matches[x] = w;
+                }
+            }
+            searching = 1;
+        }
+    }
+    if (!searching)
+        return;
+    var params = get_params();
+    params.s = term;
+    history.replaceState(null, null, parse_params(params));
+
+    searchbtn.classList.add("show");
+    searchbtn.firstChild.nodeValue = "Reset Search";
+    // calculate percent matched, excluding vertical overlap
+    var count = 0;
+    var lastx = -1;
+    var lastw = 0;
+    var keys = Array();
+    for (k in matches) {
+        if (matches.hasOwnProperty(k))
+            keys.push(k);
+    }
+    // sort the matched frames by their x location
+    // ascending, then width descending
+    keys.sort(function(a, b){
+        return a - b;
+    });
+    // Step through frames saving only the biggest bottom-up frames
+    // thanks to the sort order. This relies on the tree property
+    // where children are always smaller than their parents.
+    for (var k in keys) {
+        var x = parseInt(keys[k]);
+        var w = matches[keys[k]];
+        if (x >= lastx + lastw) {
+            count += w;
+            lastx = x;
+            lastw = w;
+        }
+    }
+    // display matched percent
+    matchedtxt.classList.remove("hide");
+    var pct = 100 * count / maxwidth;
+    if (pct != 100) pct = pct.toFixed(1);
+    matchedtxt.firstChild.nodeValue = "Matched: " + pct + "%";
+}
+function format_percent(n) {
+    return n.toFixed(4) + "%";
+}
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width="88.9565%" height="15" fill="rgb(238,117,24)" fg:x="362" fg:w="2924"/><text x="11.2631%" y="142.50">run_forever (asyncio/base_events.py:588)</text></g><g><title>_run_once (asyncio/base_events.py:1830) (2,920 samples, 88.83%)</title><rect x="11.1348%" y="148" width="88.8348%" height="15" fill="rgb(242,26,26)" fg:x="366" fg:w="2920"/><text x="11.3848%" y="158.50">_run_once (asyncio/base_events.py:1830)</text></g><g><title>time (asyncio/base_events.py:694) (5 samples, 0.15%)</title><rect x="99.8175%" y="164" width="0.1521%" height="15" fill="rgb(221,92,48)" fg:x="3281" fg:w="5"/><text x="100.0675%" y="174.50"></text></g><g><title>all (3,287 samples, 100%)</title><rect x="0.0000%" y="52" width="100.0000%" height="15" fill="rgb(209,209,32)" fg:x="0" fg:w="3287"/><text x="0.2500%" y="62.50"></text></g></svg></svg>
\ No newline at end of file
diff --git a/qarray/df.py b/qarray/df.py
index 580bbe06..10806e03 100644
--- a/qarray/df.py
+++ b/qarray/df.py
@@ -76,10 +76,18 @@ def to_dd(ds: xr.Dataset) -> dd.DataFrame:
   def f(b: t.Dict[str, slice]) -> pd.DataFrame:
     return to_pd(ds.isel(b), bounded=False)
 
+  token = (
+    f'xarray-Dataset-' 
+    f'{"_".join(list(ds.dims.keys()))}'
+    f'__'
+    f'{"_".join(list(ds.data_vars.keys()))}'
+  )
+
   return from_map(
     f,
     blocks,
-    divisions=divisions
+    divisions=divisions,
+    token=token,
   )
 
 # TODO(alxmrs): Try dask expressions dataframe:
diff --git a/qarray/df_test.py b/qarray/df_test.py
index c581c55e..2fd3319c 100644
--- a/qarray/df_test.py
+++ b/qarray/df_test.py
@@ -65,6 +65,14 @@ def test_dtypes(self):
     types = list(df.dtypes)
     self.assertEqual([self.air_small[c].dtype for c in df.columns], types)
 
+  def slow_test_open_era5(self):
+    era5_ds = xr.open_zarr(
+      'gs://gcp-public-data-arco-era5/ar/1959-2022-full_37-1h-0p25deg-chunk-1.zarr-v2',
+      chunks={'time': 240, 'level': 1}
+    )
+    era5_wind_df = to_dd(era5_ds[['u_component_of_wind', 'v_component_of_wind']])
+
+    self.assertEqual(len(era5_wind_df), 234)
 
 
 if __name__ == '__main__':
diff --git a/setup.py b/setup.py
index 38f12158..d1abf6f1 100644
--- a/setup.py
+++ b/setup.py
@@ -4,10 +4,11 @@
     name='qarray',
     version='0.0.0',
     license='Apache 2.0',
+    packages=setuptools.find_packages(exclude=['demo', 'perf_tests']),
     install_requires=['xarray', 'sqlglot'],
     extras_require={
         'dev': ['pyink', 'py-spy'],
-        'test': ['dask-sql'],
+        'test': ['dask-sql', 'zarr', 'gcsfs'],
     },
     python_requires='>=3.9',
 )

From 62c0b3865e5518101f2b9bda2bfa9d79c6c6111d Mon Sep 17 00:00:00 2001
From: Alex Merose <al@merose.com>
Date: Mon, 19 Feb 2024 18:10:43 +0700
Subject: [PATCH 2/3] Fix: Added more metadata to `from_map` call.

I found that either `from_delayed` or `from_map` took forever to get the length of era5. This looks like a more fundamental issue with Dask Dataframes. Instead, I checked how cast it was to get columns.
---
 perf_tests/open_era5.py                       |   2 +-
 ...open_era5.py-2024-02-19T17:52:51+07:00.svg | 415 ++++++++++++++++++
 qarray/core.py                                |   6 +-
 qarray/df.py                                  |  12 +-
 qarray/df_integration_test.py                 |  19 +
 qarray/df_test.py                             |   9 -
 6 files changed, 451 insertions(+), 12 deletions(-)
 create mode 100644 perf_tests/open_era5.py-2024-02-19T17:52:51+07:00.svg
 create mode 100644 qarray/df_integration_test.py

diff --git a/perf_tests/open_era5.py b/perf_tests/open_era5.py
index e79e402d..69aaf660 100755
--- a/perf_tests/open_era5.py
+++ b/perf_tests/open_era5.py
@@ -10,4 +10,4 @@
 )
 era5_wind_df = qr.to_dd(era5_ds[['u_component_of_wind', 'v_component_of_wind']])
 
-print(len(era5_wind_df))
\ No newline at end of file
+print(era5_wind_df.columns)
\ No newline at end of file
diff --git a/perf_tests/open_era5.py-2024-02-19T17:52:51+07:00.svg b/perf_tests/open_era5.py-2024-02-19T17:52:51+07:00.svg
new file mode 100644
index 00000000..535fbc29
--- /dev/null
+++ b/perf_tests/open_era5.py-2024-02-19T17:52:51+07:00.svg
@@ -0,0 +1,415 @@
+<?xml version="1.0" standalone="no"?><!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN" "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd"><svg version="1.1" width="1200" height="1754" onload="init(evt)" viewBox="0 0 1200 1754" xmlns="http://www.w3.org/2000/svg" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:fg="http://github.com/jonhoo/inferno"><!--Flame graph stack visualization. See https://github.com/brendangregg/FlameGraph for latest version, and http://www.brendangregg.com/flamegraphs.html for examples.--><!--NOTES: --><defs><linearGradient id="background" y1="0" y2="1" x1="0" x2="0"><stop stop-color="#eeeeee" offset="5%"/><stop stop-color="#eeeeb0" offset="95%"/></linearGradient></defs><style type="text/css">
+text { font-family:"Verdana"; font-size:12px; fill:rgb(0,0,0); }
+#title { text-anchor:middle; font-size:17px; }
+#matched { text-anchor:end; }
+#search { text-anchor:end; opacity:0.1; cursor:pointer; }
+#search:hover, #search.show { opacity:1; }
+#subtitle { text-anchor:middle; font-color:rgb(160,160,160); }
+#unzoom { cursor:pointer; }
+#frames > *:hover { stroke:black; stroke-width:0.5; cursor:pointer; }
+.hide { display:none; }
+.parent { opacity:0.5; }
+</style><script type="text/ecmascript"><![CDATA[
+        var nametype = 'Function:';
+        var fontsize = 12;
+        var fontwidth = 0.59;
+        var xpad = 10;
+        var inverted = true;
+        var searchcolor = 'rgb(230,0,230)';
+        var fluiddrawing = true;
+        var truncate_text_right = false;
+    ]]><![CDATA["use strict";
+var details, searchbtn, unzoombtn, matchedtxt, svg, searching, frames;
+function init(evt) {
+    details = document.getElementById("details").firstChild;
+    searchbtn = document.getElementById("search");
+    unzoombtn = document.getElementById("unzoom");
+    matchedtxt = document.getElementById("matched");
+    svg = document.getElementsByTagName("svg")[0];
+    frames = document.getElementById("frames");
+    total_samples = parseInt(frames.attributes.total_samples.value);
+    searching = 0;
+
+    // Use GET parameters to restore a flamegraph's state.
+    var restore_state = function() {
+        var params = get_params();
+        if (params.x && params.y)
+            zoom(find_group(document.querySelector('[*|x="' + params.x + '"][y="' + params.y + '"]')));
+        if (params.s)
+            search(params.s);
+    };
+
+    if (fluiddrawing) {
+        // Make width dynamic so the SVG fits its parent's width.
+        svg.removeAttribute("width");
+        // Edge requires us to have a viewBox that gets updated with size changes.
+        var isEdge = /Edge\/\d./i.test(navigator.userAgent);
+        var update_for_width_change = function() {
+            if (isEdge) {
+                svg.attributes.viewBox.value = "0 0 " + svg.width.baseVal.value + " " + svg.height.baseVal.value;
+            }
+
+            // Keep consistent padding on left and right of frames container.
+            frames.attributes.width.value = svg.width.baseVal.value - xpad * 2;
+
+            // Text truncation needs to be adjusted for the current width.
+            var el = frames.children;
+            for(var i = 0; i < el.length; i++) {
+                update_text(el[i]);
+            }
+
+            // Keep search elements at a fixed distance from right edge.
+            var svgWidth = svg.width.baseVal.value;
+            searchbtn.attributes.x.value = svgWidth - xpad;
+            matchedtxt.attributes.x.value = svgWidth - xpad;
+        };
+        window.addEventListener('resize', function() {
+            update_for_width_change();
+        });
+        // This needs to be done asynchronously for Safari to work.
+        setTimeout(function() {
+            unzoom();
+            update_for_width_change();
+            restore_state();
+            if (!isEdge) {
+                svg.removeAttribute("viewBox");
+            }
+        }, 0);
+    } else {
+        restore_state();
+    }
+}
+// event listeners
+window.addEventListener("click", function(e) {
+    var target = find_group(e.target);
+    if (target) {
+        if (target.nodeName == "a") {
+            if (e.ctrlKey === false) return;
+            e.preventDefault();
+        }
+        if (target.classList.contains("parent")) unzoom();
+        zoom(target);
+
+        // set parameters for zoom state
+        var el = target.querySelector("rect");
+        if (el && el.attributes && el.attributes.y && el.attributes["fg:x"]) {
+            var params = get_params()
+            params.x = el.attributes["fg:x"].value;
+            params.y = el.attributes.y.value;
+            history.replaceState(null, null, parse_params(params));
+        }
+    }
+    else if (e.target.id == "unzoom") {
+        unzoom();
+
+        // remove zoom state
+        var params = get_params();
+        if (params.x) delete params.x;
+        if (params.y) delete params.y;
+        history.replaceState(null, null, parse_params(params));
+    }
+    else if (e.target.id == "search") search_prompt();
+}, false)
+// mouse-over for info
+// show
+window.addEventListener("mouseover", function(e) {
+    var target = find_group(e.target);
+    if (target) details.nodeValue = nametype + " " + g_to_text(target);
+}, false)
+// clear
+window.addEventListener("mouseout", function(e) {
+    var target = find_group(e.target);
+    if (target) details.nodeValue = ' ';
+}, false)
+// ctrl-F for search
+window.addEventListener("keydown",function (e) {
+    if (e.keyCode === 114 || (e.ctrlKey && e.keyCode === 70)) {
+        e.preventDefault();
+        search_prompt();
+    }
+}, false)
+// functions
+function get_params() {
+    var params = {};
+    var paramsarr = window.location.search.substr(1).split('&');
+    for (var i = 0; i < paramsarr.length; ++i) {
+        var tmp = paramsarr[i].split("=");
+        if (!tmp[0] || !tmp[1]) continue;
+        params[tmp[0]]  = decodeURIComponent(tmp[1]);
+    }
+    return params;
+}
+function parse_params(params) {
+    var uri = "?";
+    for (var key in params) {
+        uri += key + '=' + encodeURIComponent(params[key]) + '&';
+    }
+    if (uri.slice(-1) == "&")
+        uri = uri.substring(0, uri.length - 1);
+    if (uri == '?')
+        uri = window.location.href.split('?')[0];
+    return uri;
+}
+function find_child(node, selector) {
+    var children = node.querySelectorAll(selector);
+    if (children.length) return children[0];
+    return;
+}
+function find_group(node) {
+    var parent = node.parentElement;
+    if (!parent) return;
+    if (parent.id == "frames") return node;
+    return find_group(parent);
+}
+function orig_save(e, attr, val) {
+    if (e.attributes["fg:orig_" + attr] != undefined) return;
+    if (e.attributes[attr] == undefined) return;
+    if (val == undefined) val = e.attributes[attr].value;
+    e.setAttribute("fg:orig_" + attr, val);
+}
+function orig_load(e, attr) {
+    if (e.attributes["fg:orig_"+attr] == undefined) return;
+    e.attributes[attr].value = e.attributes["fg:orig_" + attr].value;
+    e.removeAttribute("fg:orig_" + attr);
+}
+function g_to_text(e) {
+    var text = find_child(e, "title").firstChild.nodeValue;
+    return (text)
+}
+function g_to_func(e) {
+    var func = g_to_text(e);
+    // if there's any manipulation we want to do to the function
+    // name before it's searched, do it here before returning.
+    return (func);
+}
+function update_text(e) {
+    var r = find_child(e, "rect");
+    var t = find_child(e, "text");
+    var w = parseFloat(r.attributes.width.value) * frames.attributes.width.value / 100 - 3;
+    var txt = find_child(e, "title").textContent.replace(/\([^(]*\)$/,"");
+    t.attributes.x.value = format_percent((parseFloat(r.attributes.x.value) + (100 * 3 / frames.attributes.width.value)));
+    // Smaller than this size won't fit anything
+    if (w < 2 * fontsize * fontwidth) {
+        t.textContent = "";
+        return;
+    }
+    t.textContent = txt;
+    // Fit in full text width
+    if (/^ *\$/.test(txt) || t.getComputedTextLength() < w)
+        return;
+    if (truncate_text_right) {
+        // Truncate the right side of the text.
+        for (var x = txt.length - 2; x > 0; x--) {
+            if (t.getSubStringLength(0, x + 2) <= w) {
+                t.textContent = txt.substring(0, x) + "..";
+                return;
+            }
+        }
+    } else {
+        // Truncate the left side of the text.
+        for (var x = 2; x < txt.length; x++) {
+            if (t.getSubStringLength(x - 2, txt.length) <= w) {
+                t.textContent = ".." + txt.substring(x, txt.length);
+                return;
+            }
+        }
+    }
+    t.textContent = "";
+}
+// zoom
+function zoom_reset(e) {
+    if (e.tagName == "rect") {
+        e.attributes.x.value = format_percent(100 * parseInt(e.attributes["fg:x"].value) / total_samples);
+        e.attributes.width.value = format_percent(100 * parseInt(e.attributes["fg:w"].value) / total_samples);
+    }
+    if (e.childNodes == undefined) return;
+    for(var i = 0, c = e.childNodes; i < c.length; i++) {
+        zoom_reset(c[i]);
+    }
+}
+function zoom_child(e, x, zoomed_width_samples) {
+    if (e.tagName == "text") {
+        var parent_x = parseFloat(find_child(e.parentNode, "rect[x]").attributes.x.value);
+        e.attributes.x.value = format_percent(parent_x + (100 * 3 / frames.attributes.width.value));
+    } else if (e.tagName == "rect") {
+        e.attributes.x.value = format_percent(100 * (parseInt(e.attributes["fg:x"].value) - x) / zoomed_width_samples);
+        e.attributes.width.value = format_percent(100 * parseInt(e.attributes["fg:w"].value) / zoomed_width_samples);
+    }
+    if (e.childNodes == undefined) return;
+    for(var i = 0, c = e.childNodes; i < c.length; i++) {
+        zoom_child(c[i], x, zoomed_width_samples);
+    }
+}
+function zoom_parent(e) {
+    if (e.attributes) {
+        if (e.attributes.x != undefined) {
+            e.attributes.x.value = "0.0%";
+        }
+        if (e.attributes.width != undefined) {
+            e.attributes.width.value = "100.0%";
+        }
+    }
+    if (e.childNodes == undefined) return;
+    for(var i = 0, c = e.childNodes; i < c.length; i++) {
+        zoom_parent(c[i]);
+    }
+}
+function zoom(node) {
+    var attr = find_child(node, "rect").attributes;
+    var width = parseInt(attr["fg:w"].value);
+    var xmin = parseInt(attr["fg:x"].value);
+    var xmax = xmin + width;
+    var ymin = parseFloat(attr.y.value);
+    unzoombtn.classList.remove("hide");
+    var el = frames.children;
+    for (var i = 0; i < el.length; i++) {
+        var e = el[i];
+        var a = find_child(e, "rect").attributes;
+        var ex = parseInt(a["fg:x"].value);
+        var ew = parseInt(a["fg:w"].value);
+        // Is it an ancestor
+        if (!inverted) {
+            var upstack = parseFloat(a.y.value) > ymin;
+        } else {
+            var upstack = parseFloat(a.y.value) < ymin;
+        }
+        if (upstack) {
+            // Direct ancestor
+            if (ex <= xmin && (ex+ew) >= xmax) {
+                e.classList.add("parent");
+                zoom_parent(e);
+                update_text(e);
+            }
+            // not in current path
+            else
+                e.classList.add("hide");
+        }
+        // Children maybe
+        else {
+            // no common path
+            if (ex < xmin || ex >= xmax) {
+                e.classList.add("hide");
+            }
+            else {
+                zoom_child(e, xmin, width);
+                update_text(e);
+            }
+        }
+    }
+}
+function unzoom() {
+    unzoombtn.classList.add("hide");
+    var el = frames.children;
+    for(var i = 0; i < el.length; i++) {
+        el[i].classList.remove("parent");
+        el[i].classList.remove("hide");
+        zoom_reset(el[i]);
+        update_text(el[i]);
+    }
+}
+// search
+function reset_search() {
+    var el = document.querySelectorAll("#frames rect");
+    for (var i = 0; i < el.length; i++) {
+        orig_load(el[i], "fill")
+    }
+    var params = get_params();
+    delete params.s;
+    history.replaceState(null, null, parse_params(params));
+}
+function search_prompt() {
+    if (!searching) {
+        var term = prompt("Enter a search term (regexp " +
+            "allowed, eg: ^ext4_)", "");
+        if (term != null) {
+            search(term)
+        }
+    } else {
+        reset_search();
+        searching = 0;
+        searchbtn.classList.remove("show");
+        searchbtn.firstChild.nodeValue = "Search"
+        matchedtxt.classList.add("hide");
+        matchedtxt.firstChild.nodeValue = ""
+    }
+}
+function search(term) {
+    var re = new RegExp(term);
+    var el = frames.children;
+    var matches = new Object();
+    var maxwidth = 0;
+    for (var i = 0; i < el.length; i++) {
+        var e = el[i];
+        // Skip over frames which are either not visible, or below the zoomed-to frame
+        if (e.classList.contains("hide") || e.classList.contains("parent")) {
+            continue;
+        }
+        var func = g_to_func(e);
+        var rect = find_child(e, "rect");
+        if (func == null || rect == null)
+            continue;
+        // Save max width. Only works as we have a root frame
+        var w = parseInt(rect.attributes["fg:w"].value);
+        if (w > maxwidth)
+            maxwidth = w;
+        if (func.match(re)) {
+            // highlight
+            var x = parseInt(rect.attributes["fg:x"].value);
+            orig_save(rect, "fill");
+            rect.attributes.fill.value = searchcolor;
+            // remember matches
+            if (matches[x] == undefined) {
+                matches[x] = w;
+            } else {
+                if (w > matches[x]) {
+                    // overwrite with parent
+                    matches[x] = w;
+                }
+            }
+            searching = 1;
+        }
+    }
+    if (!searching)
+        return;
+    var params = get_params();
+    params.s = term;
+    history.replaceState(null, null, parse_params(params));
+
+    searchbtn.classList.add("show");
+    searchbtn.firstChild.nodeValue = "Reset Search";
+    // calculate percent matched, excluding vertical overlap
+    var count = 0;
+    var lastx = -1;
+    var lastw = 0;
+    var keys = Array();
+    for (k in matches) {
+        if (matches.hasOwnProperty(k))
+            keys.push(k);
+    }
+    // sort the matched frames by their x location
+    // ascending, then width descending
+    keys.sort(function(a, b){
+        return a - b;
+    });
+    // Step through frames saving only the biggest bottom-up frames
+    // thanks to the sort order. This relies on the tree property
+    // where children are always smaller than their parents.
+    for (var k in keys) {
+        var x = parseInt(keys[k]);
+        var w = matches[keys[k]];
+        if (x >= lastx + lastw) {
+            count += w;
+            lastx = x;
+            lastw = w;
+        }
+    }
+    // display matched percent
+    matchedtxt.classList.remove("hide");
+    var pct = 100 * count / maxwidth;
+    if (pct != 100) pct = pct.toFixed(1);
+    matchedtxt.firstChild.nodeValue = "Matched: " + pct + "%";
+}
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diff --git a/qarray/core.py b/qarray/core.py
index 8db5492a..58d3fdc3 100644
--- a/qarray/core.py
+++ b/qarray/core.py
@@ -10,6 +10,10 @@
 Row = t.List[t.Any]
 
 
+def get_columns(ds: xr.Dataset) -> t.List[str]:
+  return list(ds.dims.keys()) + list(ds.data_vars.keys())
+
+
 def unravel(ds: xr.Dataset) -> t.Iterator[Row]:
   dim_keys, dim_vals = zip(*ds.dims.items())
 
@@ -25,7 +29,7 @@ def unbounded_unravel(ds: xr.Dataset) -> np.ndarray:
   """Unravel with unbounded memory (as a NumPy Array)."""
   dim_keys, dim_vals = zip(*ds.dims.items())
   var_keys = list(ds.data_vars.keys())
-  columns = list(dim_keys) + var_keys
+  columns = get_columns(ds)
 
   N = np.prod([d for d in dim_vals])
   DD, DV = len(ds.dims), len(ds.data_vars)
diff --git a/qarray/df.py b/qarray/df.py
index 10806e03..eaff72d4 100644
--- a/qarray/df.py
+++ b/qarray/df.py
@@ -52,7 +52,7 @@ def explode(ds: xr.Dataset, chunks=None) -> t.Iterator[xr.Dataset]:
 
 
 def to_pd(ds: xr.Dataset, bounded=True) -> pd.DataFrame:
-  columns = list(ds.dims.keys()) + list(ds.data_vars.keys())
+  columns = core.get_columns(ds)
   if bounded:
     df = pd.DataFrame(core.unravel(ds), columns=columns)
     for c in columns:
@@ -76,6 +76,8 @@ def to_dd(ds: xr.Dataset) -> dd.DataFrame:
   def f(b: t.Dict[str, slice]) -> pd.DataFrame:
     return to_pd(ds.isel(b), bounded=False)
 
+  # Token is needed to prevent Dask from spending too many cycles calculating
+  # it's own token from the constituent parts.
   token = (
     f'xarray-Dataset-' 
     f'{"_".join(list(ds.dims.keys()))}'
@@ -83,9 +85,17 @@ def f(b: t.Dict[str, slice]) -> pd.DataFrame:
     f'{"_".join(list(ds.data_vars.keys()))}'
   )
 
+  columns = core.get_columns(ds)
+
+  # TODO(alxmrs): Is it possible to pass the length (known now) here?
+  meta = {
+    c: ds[c].dtype for c in columns
+  }
+
   return from_map(
     f,
     blocks,
+    meta=meta,
     divisions=divisions,
     token=token,
   )
diff --git a/qarray/df_integration_test.py b/qarray/df_integration_test.py
new file mode 100644
index 00000000..857e6b91
--- /dev/null
+++ b/qarray/df_integration_test.py
@@ -0,0 +1,19 @@
+import unittest
+
+import xarray as xr
+
+from .df import to_dd
+
+
+class Era5TestCast(unittest.TestCase):
+  def test_open_era5(self):
+    era5_ds = xr.open_zarr(
+      'gs://gcp-public-data-arco-era5/ar/1959-2022-full_37-1h-0p25deg-chunk-1.zarr-v2',
+      chunks={'time': 240, 'level': 1}
+    )
+    era5_wind_df = to_dd(era5_ds[['u_component_of_wind', 'v_component_of_wind']])
+
+    self.assertEqual(list(era5_wind_df.columns), [
+      'time', 'level', 'latitude', 'longitude',
+      'u_component_of_wind', 'v_component_of_wind',
+    ])
diff --git a/qarray/df_test.py b/qarray/df_test.py
index 2fd3319c..7c2e2b59 100644
--- a/qarray/df_test.py
+++ b/qarray/df_test.py
@@ -65,15 +65,6 @@ def test_dtypes(self):
     types = list(df.dtypes)
     self.assertEqual([self.air_small[c].dtype for c in df.columns], types)
 
-  def slow_test_open_era5(self):
-    era5_ds = xr.open_zarr(
-      'gs://gcp-public-data-arco-era5/ar/1959-2022-full_37-1h-0p25deg-chunk-1.zarr-v2',
-      chunks={'time': 240, 'level': 1}
-    )
-    era5_wind_df = to_dd(era5_ds[['u_component_of_wind', 'v_component_of_wind']])
-
-    self.assertEqual(len(era5_wind_df), 234)
-
 
 if __name__ == '__main__':
   unittest.main()

From 4d749b8909aa814c73a0d2db87947339f583013a Mon Sep 17 00:00:00 2001
From: Alex Merose <al@merose.com>
Date: Mon, 19 Feb 2024 18:11:53 +0700
Subject: [PATCH 3/3] Added TODO.

---
 qarray/df.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/qarray/df.py b/qarray/df.py
index eaff72d4..27cbdc5b 100644
--- a/qarray/df.py
+++ b/qarray/df.py
@@ -87,7 +87,7 @@ def f(b: t.Dict[str, slice]) -> pd.DataFrame:
 
   columns = core.get_columns(ds)
 
-  # TODO(alxmrs): Is it possible to pass the length (known now) here?
+  # TODO(#18): Is it possible to pass the length (known now) here?
   meta = {
     c: ds[c].dtype for c in columns
   }