Dockerfile

FROM ubuntu
    
RUN apt-get -y update && \
    apt-get -y dist-upgrade && \
    apt-get -y install \
        software-properties-common \
        git \
        libcairo2-dev \
        libxt-dev \
        libssl-dev \
        libssh2-1-dev \
        libcurl4-openssl-dev \
        apache2 \
        locales && \
    apt-add-repository -y ppa:opencpu/opencpu-1.6 && \
    apt-get update && \
    apt-get install -y \
        opencpu-lib


RUN touch /etc/apache2/sites-available/opencpu2.conf
RUN printf "ProxyPass /ocpu/ http://localhost:8001/ocpu/\nProxyPassReverse /ocpu/ http://localhost:8001/ocpu\n" >> /etc/apache2/sites-available/opencpu2.conf
RUN a2ensite opencpu2

RUN sh -c 'echo "deb http://cran.rstudio.com/bin/linux/ubuntu trusty/" >> /etc/apt/sources.list'
RUN gpg --keyserver keyserver.ubuntu.com --recv-key E084DAB9
RUN gpg -a --export E084DAB9 | apt-key add -
RUN apt-get -y update && apt-get -y install \
    r-base \
    libprotobuf-dev \
    protobuf-compiler \
    r-cran-xml
RUN R -e 'source("https://bioconductor.org/biocLite.R"); install.packages("XML", repo = "http://cran.gis-lab.info"); biocLite("Biobase"); biocLite("limma"); biocLite("org.Mm.eg.db")'
RUN R -e 'install.packages("devtools", repo = "http://cran.gis-lab.info"); library(devtools); install_github("hadley/scales"); install_github("assaron/GEOquery"); install_github("baba-beda/morpheusR")'
RUN cd /var/www/html && \
    git clone https://github.com/baba-beda/morpheus.js.git morpheus && \
    cd
    

RUN a2enmod proxy_http

EXPOSE 80
EXPOSE 443
EXPOSE 8004

RUN locale-gen en_US.UTF-8  
ENV LANG en_US.UTF-8  
ENV LANGUAGE en_US:en  
ENV LC_ALL en_US.UTF-8     

RUN mkdir -p /var/morpheus/cache
VOLUME ["/var/morpheus/cache"]

CMD service apache2 start && \
    R -e 'opencpu::opencpu$start(8001)' && \
    tail -F /var/log/opencpu/apache_access.log