mkdocs.yml

site_name: Bedshift
# site_logo: img/logo_caravel_dark.svg
site_url: http://code.databio.org/bedshift/
repo_url: http://github.com/databio/bedshift
theme: databio
# paper_link: https://doi.org/10.1101/698704

nav:
  - Introduction:
    - Overview: README.md
  - How-to Guides:
    - Generate a Random BED File: generate_random.md
    - Bedshift All BED Files in Folder: bedshift_all.md
    - Evaluate Similarity Scores: evaluation_guide.md
    - From-file Features: from_file.md
    - Use YAML to Specify Perturbations: yaml_config.md
    - Add Regions in Valid Regions: add_valid.md
  - Reference:
    - Python API: autodoc_build/bedshift.md
    - Changelog: changelog.md

plugins:
  - databio:
      autodoc_build: "docs/autodoc_build"
      autodoc_package: "bedshift"
      no_top_level: true
  - search