DataDockerContainer/Dockerfile at master · camicroscope/DataDockerContainer · GitHub

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# CaMicroscope DATA container
# DOCKER-VERSION 0.3.4
# Mongo, Bindaas

# VERSION               0.3.1

FROM     ubuntu:16.04
MAINTAINER Ganesh Iyer "lastlegion@gmail.com"

# build with
#  sudo docker build --rm=true -t="repo/imgname" .

### update
RUN apt-get -q update
RUN apt-get -q -y upgrade
RUN apt-get -q -y dist-upgrade
RUN apt-get install -q -y libcurl3

# Java
RUN mkdir /root/src

WORKDIR /root/src
RUN  apt-get install -y default-jdk
#RUN sudo apt-get install -y openjdk-8-jre
# Add java to path

ENV PATH /root/src/jre1.6.0_45/bin:$PATH

# Install MongoDB.
RUN apt-get install -y upstart
RUN apt-key adv --keyserver hkp://keyserver.ubuntu.com:80 --recv EA312927
RUN echo "deb http://repo.mongodb.org/apt/ubuntu trusty/mongodb-org/3.2 multiverse" | tee /etc/apt/sources.list.d/mongodb-org-3.2.list
RUN  apt-get update
RUN apt-get install -y mongodb-org


# Define mountable directories.
VOLUME ["/data/db"]

# Define working directory.
WORKDIR /data

# Expose ports.
#   - 27017: process
#   - 28017: http
EXPOSE 27017
EXPOSE 28017


# Bindaas
RUN mkdir -p /root/bindaas
#COPY bindaas.tar.gz /root/bindaas/
ADD https://github.com/sharmalab/bindaas/releases/download/2.02RC/bindaas-dist-2.0.2-201603312230-min.tar.gz /root/bindaas/bindaas.tar.gz
WORKDIR /root/bindaas
RUN tar -xvf bindaas.tar.gz && rm bindaas.tar.gz
COPY projects /root/bindaas/bin/projects
#COPY Camicroscope_DataLoader.project /root/bindaas/bin/projects/Camicroscope_DataLoader.project
#COPY Camicroscope_Annotations.project /root/bindaas/bin/projects/Camicroscope_Annotations.project
COPY bindaas.config.json /root/bindaas/bin/
COPY trusted-applications.config.json /root/bindaas/bin/trusted-applications.config.json

EXPOSE 9099
#EXPOSE 8080
WORKDIR /root/bindaas/bin
COPY scripts/db_index.js /root/bindaas/bin/db_index.js
#WORKDIR /root/scripts
COPY /run.sh /root/bindaas/bin/run.sh


#pre-load Camicroscope Template document
COPY /loadCamicroscopeTemplate.js /root/bindaas/bin/loadCamicroscopeTemplate.js

#pre-load admin credential document
COPY /load_admin_info.js /root/bindaas/bin/load_admin_info.js

COPY mongod.conf /etc/mongod.conf
#WORKDIR /root/

CMD ["sh", "run.sh"]