diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index b905561e..f68a02fe 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -77,7 +77,7 @@ repos: hooks: - id: validate-cff - repo: https://github.com/software-gardening/almanack - rev: v0.1.5 + rev: v0.1.6 hooks: - id: almanack-check - repo: https://github.com/PyCQA/pylint diff --git a/CITATION.cff b/CITATION.cff index a0bdc48c..1bfcb73f 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -38,6 +38,9 @@ identifiers: - description: Software DOI type: doi value: "10.5281/zenodo.14888111" + - description: Preprint DOI + type: doi + value: "10.1101/2025.06.19.660613" abstract: >- Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools. keywords: diff --git a/readme.md b/readme.md index 301bb68d..e7b4c914 100644 --- a/readme.md +++ b/readme.md @@ -5,7 +5,8 @@ ![PyPI - Version](https://img.shields.io/pypi/v/cytotable) [![Build Status](https://github.com/cytomining/cytotable/actions/workflows/test.yml/badge.svg?branch=main)](https://github.com/cytomining/cytotable/actions/workflows/test.yml?query=branch%3Amain) [![Poetry](https://img.shields.io/endpoint?url=https://python-poetry.org/badge/v0.json)](https://python-poetry.org/) -[![Software DOI badge](https://zenodo.org/badge/DOI/10.5281/zenodo.14888111.svg)](https://doi.org/10.5281/zenodo.14888111) +[![Preprint DOI badge](https://img.shields.io/badge/Preprint_DOI-10.1101/2025.06.19.660613-blue)](https://doi.org/10.1101/2025.06.19.660613) +[![Software DOI badge](https://img.shields.io/badge/Software_DOI-10.5281/zenodo.14888111-blue)](https://doi.org/10.5281/zenodo.14888111) ![dataflow](https://raw.githubusercontent.com/cytomining/cytotable/main/docs/source/_static/dataflow.svg?raw=true) _Diagram showing data flow relative to this project._