From d09d1dcae08c7f0fefc565da5c4aa4c9df692cca Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Tue, 2 Sep 2025 12:38:46 +0000 Subject: [PATCH] Bump the python-packages group with 4 updates Bumps the python-packages group with 4 updates: [cloudpathlib](https://github.com/drivendataorg/cloudpathlib), [parsl](https://github.com/Parsl/parsl), [botocore](https://github.com/boto/botocore) and [jupytext](https://github.com/mwouts/jupytext). Updates `cloudpathlib` from 0.21.1 to 0.22.0 - [Release notes](https://github.com/drivendataorg/cloudpathlib/releases) - [Changelog](https://github.com/drivendataorg/cloudpathlib/blob/master/HISTORY.md) - [Commits](https://github.com/drivendataorg/cloudpathlib/compare/v0.21.1...v0.22.0) Updates `parsl` from 2025.8.18 to 2025.9.1 - [Commits](https://github.com/Parsl/parsl/compare/2025.08.18...2025.09.01) Updates `botocore` from 1.40.17 to 1.40.21 - [Commits](https://github.com/boto/botocore/compare/1.40.17...1.40.21) Updates `jupytext` from 1.17.2 to 1.17.3 - [Release notes](https://github.com/mwouts/jupytext/releases) - [Changelog](https://github.com/mwouts/jupytext/blob/main/CHANGELOG.md) - [Commits](https://github.com/mwouts/jupytext/compare/v1.17.2...v1.17.3) --- updated-dependencies: - dependency-name: cloudpathlib dependency-version: 0.22.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: parsl dependency-version: 2025.9.1 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: python-packages - dependency-name: botocore dependency-version: 1.40.21 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: python-packages - dependency-name: jupytext dependency-version: 1.17.3 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: python-packages ... Signed-off-by: dependabot[bot] --- poetry.lock | 30 +++++++++++++++--------------- pyproject.toml | 2 +- 2 files changed, 16 insertions(+), 16 deletions(-) diff --git a/poetry.lock b/poetry.lock index 463ac546..cde0bfca 100644 --- a/poetry.lock +++ b/poetry.lock @@ -607,14 +607,14 @@ crt = ["botocore[crt] (>=1.21.0,<2.0a0)"] [[package]] name = "botocore" -version = "1.40.17" +version = "1.40.21" description = "Low-level, data-driven core of boto 3." optional = false python-versions = ">=3.9" groups = ["main", "dev"] files = [ - {file = "botocore-1.40.17-py3-none-any.whl", hash = "sha256:603951935c1a741ae70236bf15725c5293074f28503e7029ad0e24ece476a342"}, - {file = "botocore-1.40.17.tar.gz", hash = "sha256:769cd04a6a612f2d48b5f456c676fd81733fab682870952f7e2887260ea6a2bc"}, + {file = "botocore-1.40.21-py3-none-any.whl", hash = "sha256:574ecf9b68c1721650024a27e00e0080b6f141c281ebfce49e0d302969270ef4"}, + {file = "botocore-1.40.21.tar.gz", hash = "sha256:f77e9c199df0252b14ea739a9ac99723940f6bde90f4c2e7802701553a62827b"}, ] [package.dependencies] @@ -850,14 +850,14 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""} [[package]] name = "cloudpathlib" -version = "0.21.1" +version = "0.22.0" description = "pathlib-style classes for cloud storage services." optional = false python-versions = ">=3.9" groups = ["main"] files = [ - {file = "cloudpathlib-0.21.1-py3-none-any.whl", hash = "sha256:bfe580ad72ec030472ec233cd7380701b2d3227da7b2898387bd170aa70c803c"}, - {file = "cloudpathlib-0.21.1.tar.gz", hash = "sha256:f26a855abf34d98f267aafd15efdb2db3c9665913dbabe5fad079df92837a431"}, + {file = "cloudpathlib-0.22.0-py3-none-any.whl", hash = "sha256:2fdfaf5c4f85810ae8374d336d04dee371914d0e41a984695ae67308d7a5a009"}, + {file = "cloudpathlib-0.22.0.tar.gz", hash = "sha256:6c0cb0ceab4f66a3a05a84055f9318fb8316cae5e096819f3f8e4be64feab6e9"}, ] [package.dependencies] @@ -2615,14 +2615,14 @@ test = ["hatch", "ipykernel", "openapi-core (>=0.18.0,<0.19.0)", "openapi-spec-v [[package]] name = "jupytext" -version = "1.17.2" +version = "1.17.3" description = "Jupyter notebooks as Markdown documents, Julia, Python or R scripts" optional = false python-versions = ">=3.9" groups = ["docs"] files = [ - {file = "jupytext-1.17.2-py3-none-any.whl", hash = "sha256:4f85dc43bb6a24b75491c5c434001ad5ef563932f68f15dd3e1c8ce12a4a426b"}, - {file = "jupytext-1.17.2.tar.gz", hash = "sha256:772d92898ac1f2ded69106f897b34af48ce4a85c985fa043a378ff5a65455f02"}, + {file = "jupytext-1.17.3-py3-none-any.whl", hash = "sha256:09b0a94cd904416e823a5ba9f41bd181031215b6fc682d2b5c18e68354feb17c"}, + {file = "jupytext-1.17.3.tar.gz", hash = "sha256:8b6dae76d63c95cad47b493c38f0d9c74491fb621dcd0980abfcac4c8f168679"}, ] [package.dependencies] @@ -2634,11 +2634,11 @@ pyyaml = "*" tomli = {version = "*", markers = "python_version < \"3.11\""} [package.extras] -dev = ["autopep8", "black", "flake8", "gitpython", "ipykernel", "isort", "jupyter-fs (>=1.0)", "jupyter-server (!=2.11)", "nbconvert", "pre-commit", "pytest", "pytest-asyncio", "pytest-cov (>=2.6.1)", "pytest-randomly", "pytest-xdist", "sphinx", "sphinx-gallery (>=0.8)"] +dev = ["autopep8", "black", "flake8", "gitpython", "ipykernel", "isort", "jupyter-fs[fs] (>=1.0)", "jupyter-server (!=2.11)", "nbconvert", "pre-commit", "pytest", "pytest-asyncio", "pytest-cov (>=2.6.1)", "pytest-randomly", "pytest-xdist", "sphinx", "sphinx-gallery (>=0.8)"] docs = ["myst-parser", "sphinx", "sphinx-copybutton", "sphinx-rtd-theme"] test = ["pytest", "pytest-asyncio", "pytest-randomly", "pytest-xdist"] test-cov = ["black", "ipykernel", "jupyter-server (!=2.11)", "nbconvert", "pytest", "pytest-asyncio", "pytest-cov (>=2.6.1)", "pytest-randomly", "pytest-xdist"] -test-external = ["autopep8", "black", "flake8", "gitpython", "ipykernel", "isort", "jupyter-fs (>=1.0)", "jupyter-server (!=2.11)", "nbconvert", "pre-commit", "pytest", "pytest-asyncio", "pytest-randomly", "pytest-xdist", "sphinx", "sphinx-gallery (>=0.8)"] +test-external = ["autopep8", "black", "flake8", "gitpython", "ipykernel", "isort", "jupyter-fs[fs] (>=1.0)", "jupyter-server (!=2.11)", "nbconvert", "pre-commit", "pytest", "pytest-asyncio", "pytest-randomly", "pytest-xdist", "sphinx", "sphinx-gallery (>=0.8)"] test-functional = ["black", "pytest", "pytest-asyncio", "pytest-randomly", "pytest-xdist"] test-integration = ["black", "ipykernel", "jupyter-server (!=2.11)", "nbconvert", "pytest", "pytest-asyncio", "pytest-randomly", "pytest-xdist"] test-ui = ["bash-kernel"] @@ -3403,14 +3403,14 @@ files = [ [[package]] name = "parsl" -version = "2025.8.18" +version = "2025.9.1" description = "Simple data dependent workflows in Python" optional = false python-versions = ">=3.9.0" groups = ["main"] files = [ - {file = "parsl-2025.8.18-py3-none-any.whl", hash = "sha256:055017770e828f0bc93ba10546fbd1edac13148813bd8af9c7bef259434f89fd"}, - {file = "parsl-2025.8.18.tar.gz", hash = "sha256:968161eff2d93a47dab880191d6a6d3ee9d58f2a9b0438fa7ef78dbf91934b4f"}, + {file = "parsl-2025.9.1-py3-none-any.whl", hash = "sha256:d654eaac1a60d710a2b5ba8e0a65023ef273b08e5a19516a7417e930a29be26c"}, + {file = "parsl-2025.9.1.tar.gz", hash = "sha256:83617cd4a8f0d95c75f3b51e18fadec834f9ae38917684e9f978b14c47d993bf"}, ] [package.dependencies] @@ -5424,4 +5424,4 @@ test = ["big-O", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-it [metadata] lock-version = "2.1" python-versions = ">=3.9,<3.14" -content-hash = "f16641ff11ff5554ef94d76398b7df8453572d8987162fd9756de5a5c8f0ef98" +content-hash = "9865ad2852dc90c6cc5e1ca73d259ae5e9746e753639f8c0878b80b5d218153a" diff --git a/pyproject.toml b/pyproject.toml index 063df66f..8cab24e9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -18,7 +18,7 @@ keywords = [ "python", "cellprofiler", "single-cell-analysis", "way-lab" ] [tool.poetry.dependencies] python = ">=3.9,<3.14" pyarrow = ">=13.0.0" -cloudpathlib = { extras = [ "all", "s3" ], version = ">=0.18,<0.22" } +cloudpathlib = { extras = [ "all", "s3" ], version = ">=0.18,<0.23" } duckdb = ">=0.8.0,!=0.10.0,>=0.10.1" parsl = ">=2023.9.25" numpy = [