From 53f804aba1597b26fb0753a321b024bba22f2692 Mon Sep 17 00:00:00 2001 From: Doug Beatty <44704949+dbeatty10@users.noreply.github.com> Date: Fri, 10 Feb 2023 22:58:28 -0700 Subject: [PATCH 1/7] Support connections to DuckDB for `data-diff --dbt` (#1) --- sqeleton/databases/duckdb.py | 11 +++++++++++ 1 file changed, 11 insertions(+) diff --git a/sqeleton/databases/duckdb.py b/sqeleton/databases/duckdb.py index 07ae4f8..8a5a6df 100644 --- a/sqeleton/databases/duckdb.py +++ b/sqeleton/databases/duckdb.py @@ -166,3 +166,14 @@ def create_connection(self): return ddb.connect(self._args["filepath"]) except ddb.OperationalError as e: raise ConnectError(*e.args) from e + + def _normalize_table_path(self, path: DbPath) -> DbPath: + if len(path) == 1: + return self.default_schema, path[0] + elif len(path) == 2: + return path + elif len(path) > 2: + # Use only the last two values from the path + return path[-2:] + + raise ValueError(f"{self.name}: Bad table path for {self}: '{'.'.join(path)}'. Expected form: schema.table") From 446c8e9a456fb921ede8714551f216f62c42c120 Mon Sep 17 00:00:00 2001 From: Doug Beatty Date: Fri, 24 Feb 2023 08:00:02 -0700 Subject: [PATCH 2/7] Use the same `select_table_schema` and `_normalize_table_path` as Redshift --- sqeleton/databases/duckdb.py | 23 ++++++++++++++++++----- 1 file changed, 18 insertions(+), 5 deletions(-) diff --git a/sqeleton/databases/duckdb.py b/sqeleton/databases/duckdb.py index 8a5a6df..9b4bdf5 100644 --- a/sqeleton/databases/duckdb.py +++ b/sqeleton/databases/duckdb.py @@ -167,13 +167,26 @@ def create_connection(self): except ddb.OperationalError as e: raise ConnectError(*e.args) from e + def select_table_schema(self, path: DbPath) -> str: + database, schema, table = self._normalize_table_path(path) + + info_schema_path = ["information_schema", "columns"] + if database: + info_schema_path.insert(0, database) + + return ( + f"SELECT column_name, data_type, datetime_precision, numeric_precision, numeric_scale FROM {'.'.join(info_schema_path)} " + f"WHERE table_name = '{table.lower()}' AND table_schema = '{schema.lower()}'" + ) + def _normalize_table_path(self, path: DbPath) -> DbPath: if len(path) == 1: - return self.default_schema, path[0] + return None, self.default_schema, path[0] elif len(path) == 2: + return None, path[0], path[1] + elif len(path) == 3: return path - elif len(path) > 2: - # Use only the last two values from the path - return path[-2:] - raise ValueError(f"{self.name}: Bad table path for {self}: '{'.'.join(path)}'. Expected form: schema.table") + raise ValueError( + f"{self.name}: Bad table path for {self}: '{'.'.join(path)}'. Expected format: table, schema.table, or database.schema.table" + ) From d75cb4b59a906ac2c465f47713eebd6d7b2d3dbb Mon Sep 17 00:00:00 2001 From: Doug Beatty <44704949+dbeatty10@users.noreply.github.com> Date: Fri, 24 Feb 2023 08:20:15 -0700 Subject: [PATCH 3/7] Use the same `select_table_schema` and `_normalize_table_path` as Redshift (#2) --- sqeleton/databases/duckdb.py | 23 ++++++++++++++++++----- 1 file changed, 18 insertions(+), 5 deletions(-) diff --git a/sqeleton/databases/duckdb.py b/sqeleton/databases/duckdb.py index 8a5a6df..9b4bdf5 100644 --- a/sqeleton/databases/duckdb.py +++ b/sqeleton/databases/duckdb.py @@ -167,13 +167,26 @@ def create_connection(self): except ddb.OperationalError as e: raise ConnectError(*e.args) from e + def select_table_schema(self, path: DbPath) -> str: + database, schema, table = self._normalize_table_path(path) + + info_schema_path = ["information_schema", "columns"] + if database: + info_schema_path.insert(0, database) + + return ( + f"SELECT column_name, data_type, datetime_precision, numeric_precision, numeric_scale FROM {'.'.join(info_schema_path)} " + f"WHERE table_name = '{table.lower()}' AND table_schema = '{schema.lower()}'" + ) + def _normalize_table_path(self, path: DbPath) -> DbPath: if len(path) == 1: - return self.default_schema, path[0] + return None, self.default_schema, path[0] elif len(path) == 2: + return None, path[0], path[1] + elif len(path) == 3: return path - elif len(path) > 2: - # Use only the last two values from the path - return path[-2:] - raise ValueError(f"{self.name}: Bad table path for {self}: '{'.'.join(path)}'. Expected form: schema.table") + raise ValueError( + f"{self.name}: Bad table path for {self}: '{'.'.join(path)}'. Expected format: table, schema.table, or database.schema.table" + ) From 58551321eafe9bc11bfd9662f04ca39fdc0090a7 Mon Sep 17 00:00:00 2001 From: Doug Beatty Date: Fri, 24 Feb 2023 09:13:27 -0700 Subject: [PATCH 4/7] Align with implementation for Postgres --- sqeleton/databases/duckdb.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/sqeleton/databases/duckdb.py b/sqeleton/databases/duckdb.py index 9b4bdf5..89be40c 100644 --- a/sqeleton/databases/duckdb.py +++ b/sqeleton/databases/duckdb.py @@ -176,7 +176,7 @@ def select_table_schema(self, path: DbPath) -> str: return ( f"SELECT column_name, data_type, datetime_precision, numeric_precision, numeric_scale FROM {'.'.join(info_schema_path)} " - f"WHERE table_name = '{table.lower()}' AND table_schema = '{schema.lower()}'" + f"WHERE table_name = '{table}' AND table_schema = '{schema}'" ) def _normalize_table_path(self, path: DbPath) -> DbPath: From 9d99ceb1737aa157c075005eefe38d9dae70e57f Mon Sep 17 00:00:00 2001 From: Doug Beatty Date: Fri, 24 Feb 2023 09:30:42 -0700 Subject: [PATCH 5/7] Test 3-part fully-qualified names (FQN) for DuckDB --- tests/test_database.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/test_database.py b/tests/test_database.py index fb6c074..e42b92b 100644 --- a/tests/test_database.py +++ b/tests/test_database.py @@ -85,7 +85,7 @@ def test_current_timestamp(self): @test_each_database class TestThreePartIds(unittest.TestCase): def test_three_part_support(self): - if self.db_cls not in [dbs.PostgreSQL, dbs.Redshift, dbs.Snowflake]: + if self.db_cls not in [dbs.PostgreSQL, dbs.Redshift, dbs.Snowflake, dbs.DuckDB]: self.skipTest("Limited support for 3 part ids") table_name = "tbl_" + random_table_suffix() From 062d5cb7734a557d5b85865a7c98c08d4fc92594 Mon Sep 17 00:00:00 2001 From: Doug Beatty Date: Fri, 24 Feb 2023 13:29:11 -0700 Subject: [PATCH 6/7] Bump to latest version of DuckDB --- pyproject.toml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 9fd321f..e62432b 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -36,7 +36,7 @@ cryptography = {version="*", optional=true} trino = {version="^0.314.0", optional=true} presto-python-client = {version="*", optional=true} clickhouse-driver = {version="*", optional=true} -duckdb = {version="^0.6.0", optional=true} +duckdb = {version="^0.7.0", optional=true} textual = {version="^0.9.1", optional=true} textual-select = {version="*", optional=true} @@ -44,7 +44,7 @@ textual-select = {version="*", optional=true} parameterized = "*" unittest-parallel = "*" -duckdb = "^0.6.0" +duckdb = "^0.7.0" mysql-connector-python = "*" psycopg2 = "*" snowflake-connector-python = "^2.7.2" From f51e0365f7cfa0e3f61507ef8666da8d0e7915e8 Mon Sep 17 00:00:00 2001 From: Dan Date: Fri, 24 Feb 2023 13:37:23 -0700 Subject: [PATCH 7/7] poetry lock --no-update --- poetry.lock | 1187 +++++++++++++++++++++++++-------------------------- 1 file changed, 574 insertions(+), 613 deletions(-) diff --git a/poetry.lock b/poetry.lock index 5d29ab1..2428e63 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,3 +1,5 @@ +# This file is automatically @generated by Poetry and should not be changed by hand. + [[package]] name = "asn1crypto" version = "1.5.1" @@ -5,6 +7,10 @@ description = "Fast ASN.1 parser and serializer with definitions for private key category = "main" optional = false python-versions = "*" +files = [ + {file = "asn1crypto-1.5.1-py2.py3-none-any.whl", hash = "sha256:db4e40728b728508912cbb3d44f19ce188f218e9eba635821bb4b68564f8fd67"}, + {file = "asn1crypto-1.5.1.tar.gz", hash = "sha256:13ae38502be632115abf8a24cbe5f4da52e3b5231990aff31123c805306ccb9c"}, +] [[package]] name = "backports.zoneinfo" @@ -13,6 +19,24 @@ description = "Backport of the standard library zoneinfo module" category = "main" optional = false python-versions = ">=3.6" +files = [ + {file = "backports.zoneinfo-0.2.1-cp36-cp36m-macosx_10_14_x86_64.whl", hash = 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