From b778e856fd4d255d15d52da56fc32ccf66776113 Mon Sep 17 00:00:00 2001 From: LefoMount Date: Fri, 30 Jun 2023 11:48:21 +0800 Subject: [PATCH] update Allrun to allow root user --- .../df0DFoam/zeroD_cubicReactor/CH4/pytorchIntegrator/Allrun | 2 +- .../df0DFoam/zeroD_cubicReactor/H2/cvodeIntegrator/Allrun | 2 +- .../df0DFoam/zeroD_cubicReactor/H2/libtorchIntegrator/Allrun | 2 +- .../df0DFoam/zeroD_cubicReactor/H2/pytorchIntegrator/Allrun | 2 +- examples/dfHighSpeedFoam/oneD_detonationH2/Allrun | 2 +- examples/dfHighSpeedFoam/oneD_inertShockTube/Allrun | 2 +- examples/dfHighSpeedFoam/oneD_reactiveShockTube/Allrun | 2 +- examples/dfHighSpeedFoam/twoD_detonationH2/Allrun | 2 +- examples/dfLowMachFoam/2DSandiaD_DeePFGM/Allrun | 2 +- examples/dfLowMachFoam/2DSandiaD_flareFGM/Allrun | 2 +- .../oneD_freelyPropagation/CH4/pytorchIntegrator/Allrun | 2 +- .../oneD_freelyPropagation/H2/cvodeIntegrator/Allrun | 2 +- .../oneD_freelyPropagation/H2/libtorchIntegrator/Allrun | 2 +- .../oneD_freelyPropagation/H2/pytorchIntegrator/Allrun | 2 +- .../threeD_reactingTGV/H2/cvodeIntegrator/Allrun | 2 +- .../threeD_reactingTGV/H2/libtorchIntegrator/Allrun | 2 +- .../threeD_reactingTGV/H2/pytorchIntegrator/Allrun | 2 +- .../dfLowMachFoam/twoD_HIT_flame/CH4/pytorchIntegrator/Allrun | 2 +- examples/dfLowMachFoam/twoD_SandiaD_EDC_Trans/Allrun | 4 ++-- .../twoD_reactingTGV/CH4/pytorchIntegrator/Allrun | 2 +- .../dfLowMachFoam/twoD_tripleFlame/H2/cvodeIntegrator/Allrun | 2 +- .../twoD_tripleFlame/H2/libtorchIntegrator/Allrun | 2 +- .../twoD_tripleFlame/H2/pytorchIntegrator/Allrun | 2 +- examples/dfSprayFoam/aachenBomb/Allrun | 2 +- examples/dfSprayFoam/sydneySprayBurner/Allrun | 2 +- 25 files changed, 26 insertions(+), 26 deletions(-) diff --git a/examples/df0DFoam/zeroD_cubicReactor/CH4/pytorchIntegrator/Allrun b/examples/df0DFoam/zeroD_cubicReactor/CH4/pytorchIntegrator/Allrun index e135a6769..c0cebc861 100755 --- a/examples/df0DFoam/zeroD_cubicReactor/CH4/pytorchIntegrator/Allrun +++ b/examples/df0DFoam/zeroD_cubicReactor/CH4/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=df0DFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/df0DFoam/zeroD_cubicReactor/H2/cvodeIntegrator/Allrun b/examples/df0DFoam/zeroD_cubicReactor/H2/cvodeIntegrator/Allrun index e135a6769..c0cebc861 100755 --- a/examples/df0DFoam/zeroD_cubicReactor/H2/cvodeIntegrator/Allrun +++ b/examples/df0DFoam/zeroD_cubicReactor/H2/cvodeIntegrator/Allrun @@ -8,4 +8,4 @@ application=df0DFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/df0DFoam/zeroD_cubicReactor/H2/libtorchIntegrator/Allrun b/examples/df0DFoam/zeroD_cubicReactor/H2/libtorchIntegrator/Allrun index e135a6769..c0cebc861 100755 --- a/examples/df0DFoam/zeroD_cubicReactor/H2/libtorchIntegrator/Allrun +++ b/examples/df0DFoam/zeroD_cubicReactor/H2/libtorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=df0DFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/df0DFoam/zeroD_cubicReactor/H2/pytorchIntegrator/Allrun b/examples/df0DFoam/zeroD_cubicReactor/H2/pytorchIntegrator/Allrun index e135a6769..c0cebc861 100755 --- a/examples/df0DFoam/zeroD_cubicReactor/H2/pytorchIntegrator/Allrun +++ b/examples/df0DFoam/zeroD_cubicReactor/H2/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=df0DFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfHighSpeedFoam/oneD_detonationH2/Allrun b/examples/dfHighSpeedFoam/oneD_detonationH2/Allrun index c39982ff3..425a2e74d 100755 --- a/examples/dfHighSpeedFoam/oneD_detonationH2/Allrun +++ b/examples/dfHighSpeedFoam/oneD_detonationH2/Allrun @@ -10,4 +10,4 @@ cp -r 0_orig/ 0/ runApplication blockMesh runApplication setFields runApplication decomposePar -runApplication mpirun --oversubscribe -np 8 $application -parallel +runApplication mpirun --oversubscribe -np 8 --allow-run-as-root $application -parallel diff --git a/examples/dfHighSpeedFoam/oneD_inertShockTube/Allrun b/examples/dfHighSpeedFoam/oneD_inertShockTube/Allrun index 08065ff75..3b59d210a 100755 --- a/examples/dfHighSpeedFoam/oneD_inertShockTube/Allrun +++ b/examples/dfHighSpeedFoam/oneD_inertShockTube/Allrun @@ -10,4 +10,4 @@ cp -r 0_orig/ 0/ runApplication blockMesh runApplication setFields runApplication decomposePar -runApplication /usr/bin/mpirun -np 4 $application -parallel +runApplication /usr/bin/mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfHighSpeedFoam/oneD_reactiveShockTube/Allrun b/examples/dfHighSpeedFoam/oneD_reactiveShockTube/Allrun index 400e3ddc0..007cfd6b0 100755 --- a/examples/dfHighSpeedFoam/oneD_reactiveShockTube/Allrun +++ b/examples/dfHighSpeedFoam/oneD_reactiveShockTube/Allrun @@ -10,4 +10,4 @@ cp -r 0_orig/ 0/ runApplication blockMesh runApplication setFields runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfHighSpeedFoam/twoD_detonationH2/Allrun b/examples/dfHighSpeedFoam/twoD_detonationH2/Allrun index 400e3ddc0..007cfd6b0 100755 --- a/examples/dfHighSpeedFoam/twoD_detonationH2/Allrun +++ b/examples/dfHighSpeedFoam/twoD_detonationH2/Allrun @@ -10,4 +10,4 @@ cp -r 0_orig/ 0/ runApplication blockMesh runApplication setFields runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/2DSandiaD_DeePFGM/Allrun b/examples/dfLowMachFoam/2DSandiaD_DeePFGM/Allrun index f19aa16bb..39b0cddcc 100644 --- a/examples/dfLowMachFoam/2DSandiaD_DeePFGM/Allrun +++ b/examples/dfLowMachFoam/2DSandiaD_DeePFGM/Allrun @@ -12,7 +12,7 @@ runApplication blockMesh runApplication decomposePar -force -mpirun --oversubscribe -np 8 dfLowMachFoam -parallel +mpirun --oversubscribe -np 8 --allow-run-as-root dfLowMachFoam -parallel ./postProcess diff --git a/examples/dfLowMachFoam/2DSandiaD_flareFGM/Allrun b/examples/dfLowMachFoam/2DSandiaD_flareFGM/Allrun index f19aa16bb..39b0cddcc 100755 --- a/examples/dfLowMachFoam/2DSandiaD_flareFGM/Allrun +++ b/examples/dfLowMachFoam/2DSandiaD_flareFGM/Allrun @@ -12,7 +12,7 @@ runApplication blockMesh runApplication decomposePar -force -mpirun --oversubscribe -np 8 dfLowMachFoam -parallel +mpirun --oversubscribe -np 8 --allow-run-as-root dfLowMachFoam -parallel ./postProcess diff --git a/examples/dfLowMachFoam/oneD_freelyPropagation/CH4/pytorchIntegrator/Allrun b/examples/dfLowMachFoam/oneD_freelyPropagation/CH4/pytorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/oneD_freelyPropagation/CH4/pytorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/oneD_freelyPropagation/CH4/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/oneD_freelyPropagation/H2/cvodeIntegrator/Allrun b/examples/dfLowMachFoam/oneD_freelyPropagation/H2/cvodeIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/oneD_freelyPropagation/H2/cvodeIntegrator/Allrun +++ b/examples/dfLowMachFoam/oneD_freelyPropagation/H2/cvodeIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/oneD_freelyPropagation/H2/libtorchIntegrator/Allrun b/examples/dfLowMachFoam/oneD_freelyPropagation/H2/libtorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/oneD_freelyPropagation/H2/libtorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/oneD_freelyPropagation/H2/libtorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/oneD_freelyPropagation/H2/pytorchIntegrator/Allrun b/examples/dfLowMachFoam/oneD_freelyPropagation/H2/pytorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/oneD_freelyPropagation/H2/pytorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/oneD_freelyPropagation/H2/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/threeD_reactingTGV/H2/cvodeIntegrator/Allrun b/examples/dfLowMachFoam/threeD_reactingTGV/H2/cvodeIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/threeD_reactingTGV/H2/cvodeIntegrator/Allrun +++ b/examples/dfLowMachFoam/threeD_reactingTGV/H2/cvodeIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/threeD_reactingTGV/H2/libtorchIntegrator/Allrun b/examples/dfLowMachFoam/threeD_reactingTGV/H2/libtorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/threeD_reactingTGV/H2/libtorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/threeD_reactingTGV/H2/libtorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/threeD_reactingTGV/H2/pytorchIntegrator/Allrun b/examples/dfLowMachFoam/threeD_reactingTGV/H2/pytorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/threeD_reactingTGV/H2/pytorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/threeD_reactingTGV/H2/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/twoD_HIT_flame/CH4/pytorchIntegrator/Allrun b/examples/dfLowMachFoam/twoD_HIT_flame/CH4/pytorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/twoD_HIT_flame/CH4/pytorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/twoD_HIT_flame/CH4/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/twoD_SandiaD_EDC_Trans/Allrun b/examples/dfLowMachFoam/twoD_SandiaD_EDC_Trans/Allrun index 422931a47..943a9ec99 100755 --- a/examples/dfLowMachFoam/twoD_SandiaD_EDC_Trans/Allrun +++ b/examples/dfLowMachFoam/twoD_SandiaD_EDC_Trans/Allrun @@ -19,7 +19,7 @@ foamDictionary -entry "chemistry" -set "off" constant/CanteraTorchProperties runApplication setFields runApplication decomposePar -force -runParallel $application +runParallel --allow-run-as-root $application # Run with chemistry until flame reach its full size and its structure does not change significantly foamDictionary -entry "startTime" -set "0.3" system/controlDict @@ -27,7 +27,7 @@ foamDictionary -entry "writeInterval" -set "0.01" system/controlDict foamDictionary -entry "endTime" -set "0.6" system/controlDict foamDictionary -entry "chemistry" -set "on" constant/CanteraTorchProperties -runParallel -a $application +runParallel -a --allow-run-as-root $application #------------------------------------------------------------------------------ diff --git a/examples/dfLowMachFoam/twoD_reactingTGV/CH4/pytorchIntegrator/Allrun b/examples/dfLowMachFoam/twoD_reactingTGV/CH4/pytorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/twoD_reactingTGV/CH4/pytorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/twoD_reactingTGV/CH4/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/twoD_tripleFlame/H2/cvodeIntegrator/Allrun b/examples/dfLowMachFoam/twoD_tripleFlame/H2/cvodeIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/twoD_tripleFlame/H2/cvodeIntegrator/Allrun +++ b/examples/dfLowMachFoam/twoD_tripleFlame/H2/cvodeIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/twoD_tripleFlame/H2/libtorchIntegrator/Allrun b/examples/dfLowMachFoam/twoD_tripleFlame/H2/libtorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/twoD_tripleFlame/H2/libtorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/twoD_tripleFlame/H2/libtorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfLowMachFoam/twoD_tripleFlame/H2/pytorchIntegrator/Allrun b/examples/dfLowMachFoam/twoD_tripleFlame/H2/pytorchIntegrator/Allrun index 235aa3926..8cd1cbdd5 100755 --- a/examples/dfLowMachFoam/twoD_tripleFlame/H2/pytorchIntegrator/Allrun +++ b/examples/dfLowMachFoam/twoD_tripleFlame/H2/pytorchIntegrator/Allrun @@ -8,4 +8,4 @@ application=dfLowMachFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfSprayFoam/aachenBomb/Allrun b/examples/dfSprayFoam/aachenBomb/Allrun index 3751ed467..0a0119f71 100755 --- a/examples/dfSprayFoam/aachenBomb/Allrun +++ b/examples/dfSprayFoam/aachenBomb/Allrun @@ -8,4 +8,4 @@ application=dfSprayFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel diff --git a/examples/dfSprayFoam/sydneySprayBurner/Allrun b/examples/dfSprayFoam/sydneySprayBurner/Allrun index 87dd7697e..206b5a7f5 100755 --- a/examples/dfSprayFoam/sydneySprayBurner/Allrun +++ b/examples/dfSprayFoam/sydneySprayBurner/Allrun @@ -8,4 +8,4 @@ application=dfSprayFoam runApplication blockMesh runApplication decomposePar -runApplication mpirun -np 4 $application -parallel +runApplication mpirun -np 4 --allow-run-as-root $application -parallel