From e12acdff0ddb9e343af0167abd779973e9e07b21 Mon Sep 17 00:00:00 2001 From: Jinzhe Zeng Date: Sat, 8 May 2021 03:06:29 -0400 Subject: [PATCH 1/2] test lammps builds --- .github/workflows/build_cc.yml | 5 ++++ source/install/build_lammps.sh | 48 ++++++++++++++++++++++++++++++++++ 2 files changed, 53 insertions(+) create mode 100755 source/install/build_lammps.sh diff --git a/.github/workflows/build_cc.yml b/.github/workflows/build_cc.yml index 1a2b14b38d..8029263061 100644 --- a/.github/workflows/build_cc.yml +++ b/.github/workflows/build_cc.yml @@ -29,3 +29,8 @@ jobs: FLOAT_PREC: ${{ matrix.float_prec }} CC: gcc-7 CXX: g++-7 + - run: source/install/build_lammps.sh + env: + FLOAT_PREC: ${{ matrix.float_prec }} + CC: gcc-7 + CXX: g++-7 diff --git a/source/install/build_lammps.sh b/source/install/build_lammps.sh new file mode 100755 index 0000000000..0cfd77cddf --- /dev/null +++ b/source/install/build_lammps.sh @@ -0,0 +1,48 @@ +set -e + +# You need to first run ./build_cc.sh + +if [ -z "$FLOAT_PREC" ] +then + FLOAT_PREC=high +fi +#------------------ + +SCRIPT_PATH=$(dirname $(realpath -s $0)) +if [ -z "$INSTALL_PREFIX" ] +then + INSTALL_PREFIX=$(realpath -s ${SCRIPT_PATH}/../../dp) +fi +mkdir -p ${INSTALL_PREFIX} +echo "Installing LAMMPS to ${INSTALL_PREFIX}" +NPROC=$(nproc --all) + +#------------------ + +BUILD_TMP_DIR=${SCRIPT_PATH}/../build_lammps +mkdir -p ${BUILD_TMP_DIR} +cd ${BUILD_TMP_DIR} +# download LAMMMPS +LAMMPS_VERSION=stable_29Oct2020 +if [ ! -d "lammps-${LAMMPS_VERSION}" ] +then + curl -L -o lammps.tar.gz https://github.com/lammps/lammps/archive/refs/tags/${LAMMPS_VERSION}.tar.gz + tar vxzf lammps.tar.gz +fi +curl -L -o lammps.patch https://github.com/deepmd-kit-recipes/lammps-dp-feedstock/raw/fdd954a1af4fadabe5c0dd2f3bed260a484175a4/recipe/deepmd.patch +cd ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION} +patch -f -p1 < ../lammps.patch || true + +mkdir -p ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION}/build +cd ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION}/build +if [ ${FLOAT_PREC} == "high" ]; then + export PREC_DEF="-DHIGH_PREC" +fi +cmake -C ../cmake/presets/all_off.cmake -D PKG_USER-DEEPMD=ON -D PKG_KSPACE=ON -D CMAKE_INSTALL_PREFIX=${INSTALL_PREFIX} -D CMAKE_CXX_FLAGS="${PREC_DEF} -I${INSTALL_PREFIX}/include -L${INSTALL_PREFIX}/lib -Wl,--no-as-needed -lrt -ldeepmd_op -ldeepmd -ldeepmd_cc -ltensorflow_cc -ltensorflow_framework -Wl,-rpath=${INSTALL_PREFIX}/lib" ../cmake + +make -j${NPROC} +make install + +#------------------ +echo "Congratulations! LAMMPS has been installed at ${INSTALL_PREFIX}" + From 0ad88569429b4a110f172c81a82926f16c02e99f Mon Sep 17 00:00:00 2001 From: Jinzhe Zeng Date: Sat, 8 May 2021 03:19:13 -0400 Subject: [PATCH 2/2] copy lammps plugin --- source/install/build_lammps.sh | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/source/install/build_lammps.sh b/source/install/build_lammps.sh index 0cfd77cddf..a4fee95f6f 100755 --- a/source/install/build_lammps.sh +++ b/source/install/build_lammps.sh @@ -17,6 +17,12 @@ mkdir -p ${INSTALL_PREFIX} echo "Installing LAMMPS to ${INSTALL_PREFIX}" NPROC=$(nproc --all) +#------------------ +# copy lammps plugin +BUILD_TMP_DIR2=${SCRIPT_PATH}/../build +cd ${BUILD_TMP_DIR2} +make lammps + #------------------ BUILD_TMP_DIR=${SCRIPT_PATH}/../build_lammps @@ -32,6 +38,8 @@ fi curl -L -o lammps.patch https://github.com/deepmd-kit-recipes/lammps-dp-feedstock/raw/fdd954a1af4fadabe5c0dd2f3bed260a484175a4/recipe/deepmd.patch cd ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION} patch -f -p1 < ../lammps.patch || true +mkdir -p ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION}/src/USER-DEEPMD +cp -r ${BUILD_TMP_DIR2}/USER-DEEPMD/* ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION}/src/USER-DEEPMD mkdir -p ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION}/build cd ${BUILD_TMP_DIR}/lammps-${LAMMPS_VERSION}/build