diff --git a/.github/dependabot.yml b/.github/dependabot.yml
index edd9ee1f16b..e07ab37662e 100644
--- a/.github/dependabot.yml
+++ b/.github/dependabot.yml
@@ -13,7 +13,9 @@ updates:
   schedule:
     interval: weekly
 - package-ecosystem: gomod
-  directory: tools
+  directories:
+    - /tools
+    - /tools/**
   schedule:
     interval: weekly
 - package-ecosystem: gomod
diff --git a/tools/check-structfield-settings/go.mod b/tools/check-structfield-settings/go.mod
index 83a304a0d89..5b6cabec5fd 100644
--- a/tools/check-structfield-settings/go.mod
+++ b/tools/check-structfield-settings/go.mod
@@ -3,15 +3,15 @@ module github.com/google/go-github/v84/tools/check-structfield-settings
 go 1.25.0
 
 require (
-	github.com/golangci/plugin-module-register v0.1.1
+	github.com/golangci/plugin-module-register v0.1.2
 	github.com/google/go-github/v84/tools/structfield v0.0.0
 	go.yaml.in/yaml/v3 v3.0.4
-	golang.org/x/tools v0.29.0
+	golang.org/x/tools v0.43.0
 )
 
 require (
-	golang.org/x/mod v0.22.0 // indirect
-	golang.org/x/sync v0.10.0 // indirect
+	golang.org/x/mod v0.34.0 // indirect
+	golang.org/x/sync v0.20.0 // indirect
 )
 
 // Use version at HEAD, not the latest published.
diff --git a/tools/check-structfield-settings/go.sum b/tools/check-structfield-settings/go.sum
index 552434dd2d4..472d8020d6b 100644
--- a/tools/check-structfield-settings/go.sum
+++ b/tools/check-structfield-settings/go.sum
@@ -1,14 +1,14 @@
-github.com/golangci/plugin-module-register v0.1.1 h1:TCmesur25LnyJkpsVrupv1Cdzo+2f7zX0H6Jkw1Ol6c=
-github.com/golangci/plugin-module-register v0.1.1/go.mod h1:TTpqoB6KkwOJMV8u7+NyXMrkwwESJLOkfl9TxR1DGFc=
+github.com/golangci/plugin-module-register v0.1.2 h1:e5WM6PO6NIAEcij3B053CohVp3HIYbzSuP53UAYgOpg=
+github.com/golangci/plugin-module-register v0.1.2/go.mod h1:1+QGTsKBvAIvPvoY/os+G5eoqxWn70HYDm2uvUyGuVw=
 github.com/google/go-cmp v0.6.0 h1:ofyhxvXcZhMsU5ulbFiLKl/XBFqE1GSq7atu8tAmTRI=
 github.com/google/go-cmp v0.6.0/go.mod h1:17dUlkBOakJ0+DkrSSNjCkIjxS6bF9zb3elmeNGIjoY=
 go.yaml.in/yaml/v3 v3.0.4 h1:tfq32ie2Jv2UxXFdLJdh3jXuOzWiL1fo0bu/FbuKpbc=
 go.yaml.in/yaml/v3 v3.0.4/go.mod h1:DhzuOOF2ATzADvBadXxruRBLzYTpT36CKvDb3+aBEFg=
-golang.org/x/mod v0.22.0 h1:D4nJWe9zXqHOmWqj4VMOJhvzj7bEZg4wEYa759z1pH4=
-golang.org/x/mod v0.22.0/go.mod h1:6SkKJ3Xj0I0BrPOZoBy3bdMptDDU9oJrpohJ3eWZ1fY=
-golang.org/x/sync v0.10.0 h1:3NQrjDixjgGwUOCaF8w2+VYHv0Ve/vGYSbdkTa98gmQ=
-golang.org/x/sync v0.10.0/go.mod h1:Czt+wKu1gCyEFDUtn0jG5QVvpJ6rzVqr5aXyt9drQfk=
-golang.org/x/tools v0.29.0 h1:Xx0h3TtM9rzQpQuR4dKLrdglAmCEN5Oi+P74JdhdzXE=
-golang.org/x/tools v0.29.0/go.mod h1:KMQVMRsVxU6nHCFXrBPhDB8XncLNLM0lIy/F14RP588=
+golang.org/x/mod v0.34.0 h1:xIHgNUUnW6sYkcM5Jleh05DvLOtwc6RitGHbDk4akRI=
+golang.org/x/mod v0.34.0/go.mod h1:ykgH52iCZe79kzLLMhyCUzhMci+nQj+0XkbXpNYtVjY=
+golang.org/x/sync v0.20.0 h1:e0PTpb7pjO8GAtTs2dQ6jYa5BWYlMuX047Dco/pItO4=
+golang.org/x/sync v0.20.0/go.mod h1:9xrNwdLfx4jkKbNva9FpL6vEN7evnE43NNNJQ2LF3+0=
+golang.org/x/tools v0.43.0 h1:12BdW9CeB3Z+J/I/wj34VMl8X+fEXBxVR90JeMX5E7s=
+golang.org/x/tools v0.43.0/go.mod h1:uHkMso649BX2cZK6+RpuIPXS3ho2hZo4FVwfoy1vIk0=
 gopkg.in/check.v1 v0.0.0-20161208181325-20d25e280405 h1:yhCVgyC4o1eVCa2tZl7eS0r+SDo693bJlVdllGtEeKM=
 gopkg.in/check.v1 v0.0.0-20161208181325-20d25e280405/go.mod h1:Co6ibVJAznAaIkqp8huTwlJQCZ016jof/cbN4VW5Yz0=
diff --git a/tools/fmtpercentv/go.mod b/tools/fmtpercentv/go.mod
index 6164ce09247..7ba677a200d 100644
--- a/tools/fmtpercentv/go.mod
+++ b/tools/fmtpercentv/go.mod
@@ -3,11 +3,11 @@ module tools/fmtpercentv
 go 1.25.0
 
 require (
-	github.com/golangci/plugin-module-register v0.1.1
-	golang.org/x/tools v0.29.0
+	github.com/golangci/plugin-module-register v0.1.2
+	golang.org/x/tools v0.43.0
 )
 
 require (
-	golang.org/x/mod v0.22.0 // indirect
-	golang.org/x/sync v0.10.0 // indirect
+	golang.org/x/mod v0.34.0 // indirect
+	golang.org/x/sync v0.20.0 // indirect
 )
diff --git a/tools/fmtpercentv/go.sum b/tools/fmtpercentv/go.sum
index c2f7392bb23..a7fda4fe1fe 100644
--- a/tools/fmtpercentv/go.sum
+++ b/tools/fmtpercentv/go.sum
@@ -1,10 +1,10 @@
-github.com/golangci/plugin-module-register v0.1.1 h1:TCmesur25LnyJkpsVrupv1Cdzo+2f7zX0H6Jkw1Ol6c=
-github.com/golangci/plugin-module-register v0.1.1/go.mod h1:TTpqoB6KkwOJMV8u7+NyXMrkwwESJLOkfl9TxR1DGFc=
+github.com/golangci/plugin-module-register v0.1.2 h1:e5WM6PO6NIAEcij3B053CohVp3HIYbzSuP53UAYgOpg=
+github.com/golangci/plugin-module-register v0.1.2/go.mod h1:1+QGTsKBvAIvPvoY/os+G5eoqxWn70HYDm2uvUyGuVw=
 github.com/google/go-cmp v0.6.0 h1:ofyhxvXcZhMsU5ulbFiLKl/XBFqE1GSq7atu8tAmTRI=
 github.com/google/go-cmp v0.6.0/go.mod h1:17dUlkBOakJ0+DkrSSNjCkIjxS6bF9zb3elmeNGIjoY=
-golang.org/x/mod v0.22.0 h1:D4nJWe9zXqHOmWqj4VMOJhvzj7bEZg4wEYa759z1pH4=
-golang.org/x/mod v0.22.0/go.mod h1:6SkKJ3Xj0I0BrPOZoBy3bdMptDDU9oJrpohJ3eWZ1fY=
-golang.org/x/sync v0.10.0 h1:3NQrjDixjgGwUOCaF8w2+VYHv0Ve/vGYSbdkTa98gmQ=
-golang.org/x/sync v0.10.0/go.mod h1:Czt+wKu1gCyEFDUtn0jG5QVvpJ6rzVqr5aXyt9drQfk=
-golang.org/x/tools v0.29.0 h1:Xx0h3TtM9rzQpQuR4dKLrdglAmCEN5Oi+P74JdhdzXE=
-golang.org/x/tools v0.29.0/go.mod h1:KMQVMRsVxU6nHCFXrBPhDB8XncLNLM0lIy/F14RP588=
+golang.org/x/mod v0.34.0 h1:xIHgNUUnW6sYkcM5Jleh05DvLOtwc6RitGHbDk4akRI=
+golang.org/x/mod v0.34.0/go.mod h1:ykgH52iCZe79kzLLMhyCUzhMci+nQj+0XkbXpNYtVjY=
+golang.org/x/sync v0.20.0 h1:e0PTpb7pjO8GAtTs2dQ6jYa5BWYlMuX047Dco/pItO4=
+golang.org/x/sync v0.20.0/go.mod h1:9xrNwdLfx4jkKbNva9FpL6vEN7evnE43NNNJQ2LF3+0=
+golang.org/x/tools v0.43.0 h1:12BdW9CeB3Z+J/I/wj34VMl8X+fEXBxVR90JeMX5E7s=
+golang.org/x/tools v0.43.0/go.mod h1:uHkMso649BX2cZK6+RpuIPXS3ho2hZo4FVwfoy1vIk0=
diff --git a/tools/sliceofpointers/go.mod b/tools/sliceofpointers/go.mod
index c4a0584da41..f6d9bbb4d81 100644
--- a/tools/sliceofpointers/go.mod
+++ b/tools/sliceofpointers/go.mod
@@ -3,11 +3,11 @@ module tools/sliceofpointers
 go 1.25.0
 
 require (
-	github.com/golangci/plugin-module-register v0.1.1
-	golang.org/x/tools v0.29.0
+	github.com/golangci/plugin-module-register v0.1.2
+	golang.org/x/tools v0.43.0
 )
 
 require (
-	golang.org/x/mod v0.22.0 // indirect
-	golang.org/x/sync v0.10.0 // indirect
+	golang.org/x/mod v0.34.0 // indirect
+	golang.org/x/sync v0.20.0 // indirect
 )
diff --git a/tools/sliceofpointers/go.sum b/tools/sliceofpointers/go.sum
index c2f7392bb23..a7fda4fe1fe 100644
--- a/tools/sliceofpointers/go.sum
+++ b/tools/sliceofpointers/go.sum
@@ -1,10 +1,10 @@
-github.com/golangci/plugin-module-register v0.1.1 h1:TCmesur25LnyJkpsVrupv1Cdzo+2f7zX0H6Jkw1Ol6c=
-github.com/golangci/plugin-module-register v0.1.1/go.mod h1:TTpqoB6KkwOJMV8u7+NyXMrkwwESJLOkfl9TxR1DGFc=
+github.com/golangci/plugin-module-register v0.1.2 h1:e5WM6PO6NIAEcij3B053CohVp3HIYbzSuP53UAYgOpg=
+github.com/golangci/plugin-module-register v0.1.2/go.mod h1:1+QGTsKBvAIvPvoY/os+G5eoqxWn70HYDm2uvUyGuVw=
 github.com/google/go-cmp v0.6.0 h1:ofyhxvXcZhMsU5ulbFiLKl/XBFqE1GSq7atu8tAmTRI=
 github.com/google/go-cmp v0.6.0/go.mod h1:17dUlkBOakJ0+DkrSSNjCkIjxS6bF9zb3elmeNGIjoY=
-golang.org/x/mod v0.22.0 h1:D4nJWe9zXqHOmWqj4VMOJhvzj7bEZg4wEYa759z1pH4=
-golang.org/x/mod v0.22.0/go.mod h1:6SkKJ3Xj0I0BrPOZoBy3bdMptDDU9oJrpohJ3eWZ1fY=
-golang.org/x/sync v0.10.0 h1:3NQrjDixjgGwUOCaF8w2+VYHv0Ve/vGYSbdkTa98gmQ=
-golang.org/x/sync v0.10.0/go.mod h1:Czt+wKu1gCyEFDUtn0jG5QVvpJ6rzVqr5aXyt9drQfk=
-golang.org/x/tools v0.29.0 h1:Xx0h3TtM9rzQpQuR4dKLrdglAmCEN5Oi+P74JdhdzXE=
-golang.org/x/tools v0.29.0/go.mod h1:KMQVMRsVxU6nHCFXrBPhDB8XncLNLM0lIy/F14RP588=
+golang.org/x/mod v0.34.0 h1:xIHgNUUnW6sYkcM5Jleh05DvLOtwc6RitGHbDk4akRI=
+golang.org/x/mod v0.34.0/go.mod h1:ykgH52iCZe79kzLLMhyCUzhMci+nQj+0XkbXpNYtVjY=
+golang.org/x/sync v0.20.0 h1:e0PTpb7pjO8GAtTs2dQ6jYa5BWYlMuX047Dco/pItO4=
+golang.org/x/sync v0.20.0/go.mod h1:9xrNwdLfx4jkKbNva9FpL6vEN7evnE43NNNJQ2LF3+0=
+golang.org/x/tools v0.43.0 h1:12BdW9CeB3Z+J/I/wj34VMl8X+fEXBxVR90JeMX5E7s=
+golang.org/x/tools v0.43.0/go.mod h1:uHkMso649BX2cZK6+RpuIPXS3ho2hZo4FVwfoy1vIk0=
diff --git a/tools/structfield/go.mod b/tools/structfield/go.mod
index d9fc7498723..85cb5635ab3 100644
--- a/tools/structfield/go.mod
+++ b/tools/structfield/go.mod
@@ -3,11 +3,11 @@ module github.com/google/go-github/v84/tools/structfield
 go 1.25.0
 
 require (
-	github.com/golangci/plugin-module-register v0.1.1
-	golang.org/x/tools v0.29.0
+	github.com/golangci/plugin-module-register v0.1.2
+	golang.org/x/tools v0.43.0
 )
 
 require (
-	golang.org/x/mod v0.22.0 // indirect
-	golang.org/x/sync v0.10.0 // indirect
+	golang.org/x/mod v0.34.0 // indirect
+	golang.org/x/sync v0.20.0 // indirect
 )
diff --git a/tools/structfield/go.sum b/tools/structfield/go.sum
index c2f7392bb23..a7fda4fe1fe 100644
--- a/tools/structfield/go.sum
+++ b/tools/structfield/go.sum
@@ -1,10 +1,10 @@
-github.com/golangci/plugin-module-register v0.1.1 h1:TCmesur25LnyJkpsVrupv1Cdzo+2f7zX0H6Jkw1Ol6c=
-github.com/golangci/plugin-module-register v0.1.1/go.mod h1:TTpqoB6KkwOJMV8u7+NyXMrkwwESJLOkfl9TxR1DGFc=
+github.com/golangci/plugin-module-register v0.1.2 h1:e5WM6PO6NIAEcij3B053CohVp3HIYbzSuP53UAYgOpg=
+github.com/golangci/plugin-module-register v0.1.2/go.mod h1:1+QGTsKBvAIvPvoY/os+G5eoqxWn70HYDm2uvUyGuVw=
 github.com/google/go-cmp v0.6.0 h1:ofyhxvXcZhMsU5ulbFiLKl/XBFqE1GSq7atu8tAmTRI=
 github.com/google/go-cmp v0.6.0/go.mod h1:17dUlkBOakJ0+DkrSSNjCkIjxS6bF9zb3elmeNGIjoY=
-golang.org/x/mod v0.22.0 h1:D4nJWe9zXqHOmWqj4VMOJhvzj7bEZg4wEYa759z1pH4=
-golang.org/x/mod v0.22.0/go.mod h1:6SkKJ3Xj0I0BrPOZoBy3bdMptDDU9oJrpohJ3eWZ1fY=
-golang.org/x/sync v0.10.0 h1:3NQrjDixjgGwUOCaF8w2+VYHv0Ve/vGYSbdkTa98gmQ=
-golang.org/x/sync v0.10.0/go.mod h1:Czt+wKu1gCyEFDUtn0jG5QVvpJ6rzVqr5aXyt9drQfk=
-golang.org/x/tools v0.29.0 h1:Xx0h3TtM9rzQpQuR4dKLrdglAmCEN5Oi+P74JdhdzXE=
-golang.org/x/tools v0.29.0/go.mod h1:KMQVMRsVxU6nHCFXrBPhDB8XncLNLM0lIy/F14RP588=
+golang.org/x/mod v0.34.0 h1:xIHgNUUnW6sYkcM5Jleh05DvLOtwc6RitGHbDk4akRI=
+golang.org/x/mod v0.34.0/go.mod h1:ykgH52iCZe79kzLLMhyCUzhMci+nQj+0XkbXpNYtVjY=
+golang.org/x/sync v0.20.0 h1:e0PTpb7pjO8GAtTs2dQ6jYa5BWYlMuX047Dco/pItO4=
+golang.org/x/sync v0.20.0/go.mod h1:9xrNwdLfx4jkKbNva9FpL6vEN7evnE43NNNJQ2LF3+0=
+golang.org/x/tools v0.43.0 h1:12BdW9CeB3Z+J/I/wj34VMl8X+fEXBxVR90JeMX5E7s=
+golang.org/x/tools v0.43.0/go.mod h1:uHkMso649BX2cZK6+RpuIPXS3ho2hZo4FVwfoy1vIk0=