From c8fd5305ab1cf8c3053515c4c756e40e333c18a4 Mon Sep 17 00:00:00 2001 From: johnnymillergh Date: Sun, 8 Feb 2026 13:31:30 +0800 Subject: [PATCH 01/11] chore: migrate from Poetry to uv for dependency management Replace Poetry with uv for faster dependency resolution and installation. This follows the same migration pattern used in python-web-service-boilerplate. Migration includes: - Convert pyproject.toml from Poetry format to PEP 621 standard - Replace poetry.lock with uv.lock - Update GitHub Actions workflows to use uv - Update pre-commit hooks to use 'uv run' instead of 'poetry run' - Modernize Dockerfile to use uv - Update README.md with uv setup and usage instructions All tests and linting pass with uv. --- .../project-environment-setup/action.yml | 32 +- ...-with-poetry.yml => python-ci-with-uv.yml} | 19 +- .pre-commit-config.yaml | 34 +- Dockerfile | 116 +- README.md | 69 +- poetry.lock => poetry.lock.backup | 0 pyproject.toml | 111 +- src/python_boilerplate/__main__.py | 3 +- .../application_configuration.py | 2 +- uv.lock | 1168 +++++++++++++++++ 10 files changed, 1344 insertions(+), 210 deletions(-) rename .github/workflows/{python-ci-with-poetry.yml => python-ci-with-uv.yml} (85%) rename poetry.lock => poetry.lock.backup (100%) create mode 100644 uv.lock diff --git a/.github/actions/project-environment-setup/action.yml b/.github/actions/project-environment-setup/action.yml index 04a21dd..b7fc363 100644 --- a/.github/actions/project-environment-setup/action.yml +++ b/.github/actions/project-environment-setup/action.yml @@ -1,26 +1,18 @@ name: Project Environment Setup -description: Setup project environment +description: Setup project environment with uv runs: using: "composite" steps: - - name: Install Poetry - shell: bash - run: pipx install poetry==2.1.4 - # The actions/cache step below uses this id to get the exact python version - - id: setup-python - uses: actions/setup-python@v5 - with: - python-version: "3.13.7" - architecture: x64 - # https://github.com/actions/setup-python/blob/main/docs/advanced-usage.md#caching-packages - cache: "poetry" - # https://github.com/actions/cache/blob/main/examples.md#python---pipenv - - id: cache-pipenv - uses: actions/cache@v3 + # https://docs.astral.sh/uv/guides/integration/github/ + - name: Install uv + uses: astral-sh/setup-uv@v7 with: - path: ~/.local/share/virtualenvs - key: ${{ runner.os }}-python-${{ steps.setup-python.outputs.python-version }}-poetry-${{ hashFiles('poetry.lock') }} - - name: Install Dependencies with Poetry - if: steps.cache-pipenv.outputs.cache-hit != 'true' + # Install a specific version of uv. + version: "0.9.13" + enable-cache: true + - name: Set up Python + shell: bash + run: uv python install + - name: Install Dependencies with uv shell: bash - run: poetry install --with test + run: uv sync --all-extras diff --git a/.github/workflows/python-ci-with-poetry.yml b/.github/workflows/python-ci-with-uv.yml similarity index 85% rename from .github/workflows/python-ci-with-poetry.yml rename to .github/workflows/python-ci-with-uv.yml index cfe5474..75ccbb9 100644 --- a/.github/workflows/python-ci-with-poetry.yml +++ b/.github/workflows/python-ci-with-uv.yml @@ -1,4 +1,4 @@ -name: Python CI with Poetry +name: Python CI with uv on: pull_request: @@ -35,21 +35,20 @@ jobs: steps: - uses: actions/checkout@v3 - uses: ./.github/actions/project-environment-setup - - run: poetry run ruff check . + - run: uv run ruff check . - name: Install mypy types run: | - yes | poetry run mypy --install-types \ + yes | uv run mypy --install-types \ || test $? -eq 2 && echo "Installed mypy types successfully" \ || echo "Failed to install mypy types" - - run: poetry run mypy + - run: uv run mypy - name: Python Tests with pytest - run: env LOG_LEVEL=INFO poetry run pytest --quiet --cov --cov-report term -n auto --benchmark-disable + run: env LOG_LEVEL=INFO uv run pytest --quiet --cov --cov-report term -n auto --benchmark-disable - name: Python Benchmark with pytest - run: env LOG_LEVEL=ERROR poetry run pytest --capture=no --log-cli-level=ERROR -n 0 --benchmark-only + run: env LOG_LEVEL=ERROR uv run pytest --capture=no --log-cli-level=ERROR -n 0 --benchmark-only - name: Run Python Application run: | - poetry env activate - PYTHONPATH=`pwd` poetry run python3 src/python_boilerplate/__main__.py + PYTHONPATH=`pwd` uv run python3 src/python_boilerplate/__main__.py pyinstaller-smoke-test: needs: static-code-analysis runs-on: ubuntu-latest @@ -58,7 +57,7 @@ jobs: - uses: ./.github/actions/project-environment-setup - name: Build Application Executable Package with PyInstaller run: | - poetry run pyinstaller --windowed --noconsole \ + uv run pyinstaller --windowed --noconsole \ --add-data "pyproject.toml:." \ --add-data "src/python_boilerplate/resources/*:python_boilerplate/resources" \ --name multithread_and_thread_pool_usage \ @@ -89,7 +88,7 @@ jobs: - uses: ./.github/actions/project-environment-setup - name: Check Versions of Python Packages run: | - output=$(poetry run pip list --outdated) + output=$(uv pip list --outdated) if [ -z "$output" ] then echo "🎉 Congrats! Everything is up-to-date" diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 4be24f8..bf053df 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -1,5 +1,9 @@ # See https://pre-commit.com/ for usage and config -fail_fast: true +exclude: | + (?x)^( + .venv/| + .sqlite3 + )$^ repos: # https://github.com/pre-commit/pre-commit-hooks/releases/tag/v6.0.0 - repo: https://github.com/pre-commit/pre-commit-hooks @@ -19,27 +23,33 @@ repos: - id: check-case-conflict - repo: local hooks: - - id: poetry-check - name: Poetry Check + - id: ruff-fix-imports + name: Ruff Fix Imports stages: [ pre-commit ] - language: python - entry: poetry check - pass_filenames: false - files: ^(.*/)?(poetry\.lock|pyproject\.toml)$ - - id: ruff-format + language: system + entry: uv run ruff check --select I --fix + types: [ python ] + - id: ruff-check-fix name: Ruff Check and Fix stages: [ pre-commit ] language: system # Ruff checks and fixes Python code for both /src and /tests directories - entry: poetry run ruff check . + entry: uv run ruff check types: [ python ] args: - "--fix" + - id: ruff-format + name: Ruff Format + stages: [ pre-commit ] + language: system + # Ruff checks and fixes Python code for both /src and /tests directories + entry: uv run ruff format + types: [ python ] - id: mypy name: mypy stages: [ pre-commit ] language: system - entry: poetry run mypy + entry: uv run mypy types: [ python ] require_serial: true - id: pytest @@ -48,7 +58,7 @@ repos: language: system # https://github.com/pytest-dev/pytest/issues/5502#issuecomment-1020761655 # Prevent Pytest logging error like: ValueError: I/O operation on closed file. - entry: env LOG_LEVEL=DEBUG poetry run pytest --cov --cov-report html --html=./build/.pytest_report/report.html --self-contained-html --log-cli-level=DEBUG -n auto --benchmark-disable + entry: env LOG_LEVEL=DEBUG uv run pytest --cov --cov-report html --html=./build/.pytest_report/report.html --self-contained-html --log-cli-level=DEBUG -n auto --benchmark-disable types: [ python ] pass_filenames: false - id: pytest-cov @@ -57,6 +67,6 @@ repos: language: system # https://github.com/pytest-dev/pytest/issues/5502#issuecomment-1020761655 # Prevent Pytest logging error like: ValueError: I/O operation on closed file. - entry: env LOG_LEVEL=ERROR poetry run pytest --cov --cov-fail-under=90 --capture=no --log-cli-level=ERROR -n auto + entry: env LOG_LEVEL=ERROR uv run pytest --cov --cov-fail-under=90 --capture=no --log-cli-level=ERROR -n auto types: [ python ] pass_filenames: false diff --git a/Dockerfile b/Dockerfile index 5fd7907..918cb94 100644 --- a/Dockerfile +++ b/Dockerfile @@ -1,105 +1,39 @@ # syntax=docker/dockerfile:1 # Keep this syntax directive! It's used to enable Docker BuildKit -# Based on https://github.com/python-poetry/poetry/discussions/1879?sort=top#discussioncomment-216865 -# Inpired by https://gist.github.com/usr-ein/c42d98abca3cb4632ab0c2c6aff8c88a -# but I try to keep it updated (see history) +# https://docs.roxautomation.com/linux/docker_best_practices/#multi-stage-build-patterns-with-uv -################################ -# PYTHON-BASE -# Sets up all our shared environment variables -################################ -FROM python:3.13.7-slim AS python-base +FROM python:3.13.7-slim AS base -# Setup env for Python -ENV PYTHONUNBUFFERED=1 \ - # prevents python creating .pyc files - PYTHONDONTWRITEBYTECODE=1 \ - \ - # pip - PIP_NO_CACHE_DIR=off \ - PIP_DISABLE_PIP_VERSION_CHECK=on \ - PIP_DEFAULT_TIMEOUT=100 \ - \ - # poetry - # https://python-poetry.org/docs/configuration/#using-environment-variables - POETRY_VERSION=2.1.4 \ - # make poetry install to this location - POETRY_HOME="/opt/poetry" \ - # make poetry create the virtual environment in the project's root - # it gets named `.venv` - POETRY_VIRTUALENVS_IN_PROJECT=true \ - # do not ask any interactive question - POETRY_NO_INTERACTION=1 \ - \ - # paths - # this is where our requirements + virtual environment will live - PYSETUP_PATH="/opt/pysetup" \ - VENV_PATH="/opt/pysetup/.venv" +# Build stage +FROM base AS builder +COPY --from=ghcr.io/astral-sh/uv:0.9.13 /uv /bin/uv -# prepend poetry and venv to path -ENV PATH="$POETRY_HOME/bin:$VENV_PATH/bin:$PATH" +ENV UV_COMPILE_BYTECODE=1 \ + UV_LINK_MODE=copy \ + UV_PYTHON_DOWNLOADS=never -################################ -# BUILDER-BASE -# Used to build deps + create our virtual environment -################################ -FROM python-base AS builder-base -RUN apt-get update \ - && apt-get install --no-install-recommends -y \ - # deps for installing poetry - curl \ - # deps for building python deps - build-essential - -# install poetry - respects $POETRY_VERSION & $POETRY_HOME -# The --mount will mount the buildx cache directory to where -# Poetry and Pip store their cache so that they can re-use it -RUN --mount=type=cache,target=/root/.cache \ - curl -sSL https://install.python-poetry.org | python3 - - -RUN poetry --version - -# copy project requirement files here to ensure they will be cached. -WORKDIR $PYSETUP_PATH -COPY poetry.lock pyproject.toml ./ - -# install runtime deps - uses $POETRY_VIRTUALENVS_IN_PROJECT internally -RUN --mount=type=cache,target=/root/.cache \ - poetry install --no-interaction --no-root --without test - -################################ -# DEVELOPMENT -# Image used during development / testing -################################ -FROM python-base AS development -WORKDIR $PYSETUP_PATH - -# copy in our built poetry + venv -COPY --from=builder-base $POETRY_HOME $POETRY_HOME -COPY --from=builder-base $PYSETUP_PATH $PYSETUP_PATH - -# quicker install as runtime deps are already installed -RUN poetry install - -# will become mountpoint of our code WORKDIR /app -################################ -# PRODUCTION -# Final image used for runtime -################################ -FROM python-base AS production -COPY --from=builder-base $PYSETUP_PATH $PYSETUP_PATH -COPY . /app/ +# Install dependencies first (optimal caching) +RUN --mount=type=cache,target=/root/.cache/uv \ + --mount=type=bind,source=uv.lock,target=uv.lock \ + --mount=type=bind,source=pyproject.toml,target=pyproject.toml \ + uv sync --frozen --no-install-project --no-dev + +# Copy and install application +COPY . /app +RUN --mount=type=cache,target=/root/.cache/uv \ + uv sync --frozen --no-dev + +# Runtime stage +FROM base +RUN groupadd -r app && useradd -r -d /app -g app app +COPY --from=builder --chown=app:app /app /app +ENV PATH="/app/.venv/bin:$PATH" +USER app WORKDIR /app/src -RUN pwd -# Show the project module in the current directory. e.g. -# total 4.0K -# drwxr-xr-x 11 root root 4.0K Jan 1 12:59 python_boilerplate -RUN ls -lh - # Run the executable ENTRYPOINT ["python", "-m", "python_boilerplate"] CMD ["param_1_from_command_line", "param_2_from_command_line"] diff --git a/README.md b/README.md index fbaddf3..5d27d26 100644 --- a/README.md +++ b/README.md @@ -23,7 +23,8 @@ Here are the highlights of **python_boilerplate**: `Python` - [![Python](https://img.shields.io/badge/Python-v3.13.7-blue)](https://www.python.org/downloads/release/python-3131/) - `Poetry` is to Python virtualenv management tool for the project. + `uv` is a fast Python package installer and dependency management tool for the project. + 2. Data validation using Python type hints with [Pydantic](https://github.com/pydantic/pydantic). @@ -83,31 +84,32 @@ Here are the highlights of **python_boilerplate**: 1. Setup the development environment ```shell - # Install pipx if not installed - $ python3 -m pip install pipx - $ python3 -m pipx ensurepath + # Install uv + $ curl -LsSf https://astral.sh/uv/install.sh | sh - # Install poetry using pipx, https://python-poetry.org/docs/#installing-with-pipx - $ pipx install poetry + # For Windows PowerShell + $ powershell -ExecutionPolicy ByPass -c "irm https://astral.sh/uv/install.ps1 | iex" + # Or use winget + $ winget install --id=astral-sh.uv ``` 2. Install dependencies, with optional dependency group `test` ```shell - $ poetry install --with test + $ uv sync --extra test --extra dev ``` 3. Install mypy types ```shell - $ poetry run mypy --install-types + $ uv run mypy --install-types ``` 4. Setup pre-commit and pre-push hooks ```shell - $ poetry run pre-commit install -t pre-commit - $ poetry run pre-commit install -t pre-push + $ uv run pre-commit install -t pre-commit + $ uv run pre-commit install -t pre-push ``` ## Useful Commands @@ -115,12 +117,47 @@ Here are the highlights of **python_boilerplate**: ### Run Python Module ```shell -$ poetry env activate $ python3 -m python_boilerplate ``` ### Run Python Script +**Append your project's root directory to** `PYTHONPATH` — In any environment you wish to run your Python application such as Docker, vagrant or your virtual environment i.e. in bin/activate, run the below command: + +> [How to Fix ModuleNotFoundError and ImportError](https://towardsdatascience.com/how-to-fix-modulenotfounderror-and-importerror-248ce5b69b1c) + +For macOS or Linux, + +```shell +# Ensure `pwd` is the root directory of the project +$ PYTHONPATH=`pwd` uv run python3 python_boilerplate/demo/pandas_usage.py +$ PYTHONPATH=`pwd` uv run python3 python_boilerplate/demo/multithread_and_thread_pool_usage.py + +# Run the main module +$ PYTHONPATH=`pwd` uv run python3 python_boilerplate/__main__.py + +# Run a pytest script +$ pytest --log-cli-level=DEBUG --capture=no tests/common/test_debounce_throttle.py + +# Run a pytest script with `-k` EXPRESSION +$ pytest --log-cli-level=DEBUG --capture=no tests/common/test_debounce_throttle.py -k 'test_debounce' + +# For more details of pytest command +$ uv run pytest --help +``` + +For Windows Terminal, +```powershell +# Ensure `$PWD.Path` is the root directory of the project +$ $env:PYTHONPATH=$PWD.Path; uv run python .\python_boilerplate\demo\pandas_usage.py +$ $env:PYTHONPATH=$PWD.Path; uv run python .\python_boilerplate\demo\multithread_and_thread_pool_usage.py + +# Run the main module +$ $env:PYTHONPATH=$PWD.Path; uv run python .\python_boilerplate\__main__.py +``` + +### Run Python Script + **Append your project’s root directory to** `PYTHONPATH` — In any environment you wish to run your Python application such as Docker, vagrant or your virtual environment i.e. in bin/activate, run the below command: > [How to Fix ModuleNotFoundError and ImportError](https://towardsdatascience.com/how-to-fix-modulenotfounderror-and-importerror-248ce5b69b1c) @@ -172,7 +209,7 @@ $ $env:PYTHONPATH=$PWD.Path; poetry run python .\python_boilerplate\__main__.py Build artifact with macOS or Linux, ```shell -$ poetry run pyinstaller --console \ +$ uv run pyinstaller --console \ --add-data "pyproject.toml:." \ --add-data "src/python_boilerplate/resources/*:python_boilerplate/resources" \ --name pandas_usage \ @@ -181,7 +218,7 @@ $ poetry run pyinstaller --console \ On Windows, ```powershell -$ poetry run pyinstaller --console ` +$ uv run pyinstaller --console ` --add-data "pyproject.toml;." ` --add-data "src/python_boilerplate/resources/*;python_boilerplate/resources" ` --name multithread_and_thread_pool_usage ` @@ -193,13 +230,13 @@ $ poetry run pyinstaller --console ` Run with pytest, analyze code coverage, generate HTML code coverage reports, fail the test if coverage percentage is under 90%, ```shell -$ poetry run pytest --cov --cov-report html --cov-fail-under=85 --capture=no --log-cli-level=INFO +$ uv run pytest --cov --cov-report html --cov-fail-under=85 --capture=no --log-cli-level=INFO ``` Benchmark with pytest, ```shell -$ poetry run pytest --capture=no --log-cli-level=ERROR -n 0 --benchmark-only +$ uv run pytest --capture=no --log-cli-level=ERROR -n 0 --benchmark-only ``` ### Conventional Changelog CLI @@ -225,7 +262,7 @@ $ poetry run pytest --capture=no --log-cli-level=ERROR -n 0 --benchmark-only ### Check Versions of Python Packages ```shell -$ poetry run pip list --outdated +$ uv pip list --outdated ``` Output be like, diff --git a/poetry.lock b/poetry.lock.backup similarity index 100% rename from poetry.lock rename to poetry.lock.backup diff --git a/pyproject.toml b/pyproject.toml index b7a79d2..b88cf0f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,67 +1,61 @@ -[tool.poetry] +[project] name = "python-boilerplate" -version = "8.1" +version = "8.2-beta" description = "A boilerplate project for Python." -authors = ["Johnny Miller "] -license = "Apache-2.0" +authors = [ + { name = "Johnny Miller", email = "johnnysviva@outlook.com" } +] +license = { text = "Apache-2.0" } readme = "README.md" -homepage = "https://github.com/johnnymillergh/python-boilerplate/" -repository = "https://github.com/johnnymillergh/python-boilerplate.git" keywords = ["python", "boilerplate"] -packages = [ - { include = "python_boilerplate", from = "src" } +requires-python = ">=3.13.1,<3.14" +dependencies = [ + "pydantic==2.11.7", + "loguru==0.7.3", + "pyhocon==0.3.61", + "numpy==2.3.2", + "pandas==2.3.2", + "arrow==1.3.0", + "tzlocal==5.2", + "peewee==3.18.2", + "jinja2==3.1.6", + "faker==37.5.3", + "python-stdnum==2.1", + "tenacity==9.1.2", + "matplotlib==3.10.5", + "psutil==7.0.0", + "apscheduler==3.11.0", + "humanize==4.12.3", +] + +[project.optional-dependencies] +dev = [ + "mypy==1.17.1", + "pre-commit==4.0.1", + "pyinstrument==5.1.1", + "pyinstaller==6.15.0", +] +linter = [ + "ruff==0.8.6", +] +test = [ + "pytest==8.3.4", + "pytest-mock==3.14.0", + "pytest-cov==6.0.0", + "pytest-html==4.1.1", + "pytest-xdist==3.6.1", + "pytest-asyncio==0.25.1", + "pytest-benchmark==5.1.0", + "pytest-monitor==1.6.6", ] +[project.urls] +Homepage = "https://github.com/johnnymillergh/python-boilerplate/" +Repository = "https://github.com/johnnymillergh/python-boilerplate.git" [build-system] -requires = ["poetry-core"] -build-backend = "poetry.core.masonry.api" - - -[tool.poetry.dependencies] -python = ">=3.13.1,<3.14" -pydantic = "==2.11.7" -loguru = "==0.7.3" -pyhocon = "==0.3.61" -numpy = "==2.3.2" -pandas = "==2.3.2" -arrow = "==1.3.0" -tzlocal = "==5.2" -peewee = "==3.18.2" -jinja2 = "==3.1.6" -faker = "==37.5.3" -python-stdnum = "==2.1" -tenacity = "==9.1.2" -matplotlib = "==3.10.5" -psutil = "==7.0.0" -apscheduler = "==3.11.0" -humanize = "==4.12.3" - - -[tool.poetry.group.dev.dependencies] -mypy = "==1.17.1" -pre-commit = "==4.0.1" -pyinstrument = "==5.1.1" -pyinstaller = "==6.15.0" - - -[tool.poetry.group.linter.dependencies] -ruff = "==0.8.6" - - -[tool.poetry.group.test] -optional = true - - -[tool.poetry.group.test.dependencies] -pytest = "==8.3.4" -pytest-mock = "==3.14.0" -pytest-cov = "==6.0.0" -pytest-html = "==4.1.1" -pytest-xdist = "==3.6.1" -pytest-asyncio = "==0.25.1" -pytest-benchmark = "==5.1.0" -pytest-monitor = "==1.6.6" +requires = ["setuptools>=61.0", "wheel"] +build-backend = "setuptools.build_meta" [tool.mypy] files = ["src", "tests"] @@ -128,12 +122,13 @@ lint.ignore = [ ] line-length = 120 show-fixes = true -src = ["src", ] +src = ["src", "tests"] target-version = "py39" +respect-gitignore = true [tool.ruff.lint.flake8-copyright] -author = "Lari Liuhamo" +author = "Johnny Miller" [tool.ruff.lint.flake8-quotes] diff --git a/src/python_boilerplate/__main__.py b/src/python_boilerplate/__main__.py index dfdbe16..f239d30 100644 --- a/src/python_boilerplate/__main__.py +++ b/src/python_boilerplate/__main__.py @@ -70,8 +70,7 @@ def startup() -> None: save(StartupLog(command_line=" ".join(sys.argv))) elapsed = time.perf_counter() - __start_time - logger.info(f"Started {get_module_name()}@{pyproject_toml['tool']['poetry']['version']} in " - f"{timedelta(seconds=elapsed)}") + logger.info(f"Started {get_module_name()}@{pyproject_toml['project']['version']} in {timedelta(seconds=elapsed)}") @atexit.register diff --git a/src/python_boilerplate/configuration/application_configuration.py b/src/python_boilerplate/configuration/application_configuration.py index ad741df..1057ee6 100644 --- a/src/python_boilerplate/configuration/application_configuration.py +++ b/src/python_boilerplate/configuration/application_configuration.py @@ -32,7 +32,7 @@ def check_existence(file_path: Path) -> bool: def configure() -> None: """Configure application.""" - 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4083, upload-time = "2024-12-07T15:28:26.465Z" }, +] From 47208cf1d2fb938f794e7e37ffba9c33eda7a650 Mon Sep 17 00:00:00 2001 From: johnnymillergh Date: Mon, 9 Feb 2026 09:20:05 +0800 Subject: [PATCH 02/11] chore: update .dockerignore to replace poetry.lock with uv.lock --- .dockerignore | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.dockerignore b/.dockerignore index d14c55d..44e6cdc 100644 --- a/.dockerignore +++ b/.dockerignore @@ -3,5 +3,5 @@ # ... except for dependencies and source !pyproject.toml -!poetry.lock +!uv.lock !src/ From 6adf7a86437672a4c920ac08ee4811c4765b3fbb Mon Sep 17 00:00:00 2001 From: johnnymillergh Date: Mon, 9 Feb 2026 09:27:47 +0800 Subject: [PATCH 03/11] chore: update pyproject.toml and README for uv migration --- README.md | 2 +- pyproject.toml | 7 ++++++- 2 files changed, 7 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 5d27d26..3d72c81 100644 --- a/README.md +++ b/README.md @@ -117,7 +117,7 @@ Here are the highlights of **python_boilerplate**: ### Run Python Module ```shell -$ python3 -m python_boilerplate +$ uv run python -m python_boilerplate ``` ### Run Python Script diff --git a/pyproject.toml b/pyproject.toml index b88cf0f..4d3f820 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -57,6 +57,11 @@ Repository = "https://github.com/johnnymillergh/python-boilerplate.git" requires = ["setuptools>=61.0", "wheel"] build-backend = "setuptools.build_meta" +[tool.setuptools] +package-dir = {"" = "src"} +[tool.setuptools.packages.find] +where = ["src"] + [tool.mypy] files = ["src", "tests"] cache_dir = "./build/.mypy_cache" @@ -123,7 +128,7 @@ lint.ignore = [ line-length = 120 show-fixes = true src = ["src", "tests"] -target-version = "py39" +target-version = "py313" respect-gitignore = true From 491105382a0d4a53c4c4b405ae2f35fb2357730a Mon Sep 17 00:00:00 2001 From: johnnymillergh Date: Sat, 14 Feb 2026 09:25:38 +0800 Subject: [PATCH 04/11] chore: update test cases and pyproject.toml for dependency upgrades --- pyproject.toml | 57 +- .../demo/test_arrow_usage.py | 12 +- .../demo/test_pandas_usage.py | 2 +- uv.lock | 499 +++++++++--------- 4 files changed, 297 insertions(+), 273 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 4d3f820..3d69947 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -10,42 +10,42 @@ readme = "README.md" keywords = ["python", "boilerplate"] requires-python = ">=3.13.1,<3.14" dependencies = [ - "pydantic==2.11.7", + "pydantic==2.12.5", "loguru==0.7.3", "pyhocon==0.3.61", - "numpy==2.3.2", - "pandas==2.3.2", - "arrow==1.3.0", - "tzlocal==5.2", - "peewee==3.18.2", + "numpy==2.4.2", + "pandas==3.0.0", + "arrow==1.4.0", + "tzlocal==5.3.1", + "peewee==3.19.0", "jinja2==3.1.6", - "faker==37.5.3", - "python-stdnum==2.1", - "tenacity==9.1.2", - "matplotlib==3.10.5", - "psutil==7.0.0", - "apscheduler==3.11.0", - "humanize==4.12.3", + "faker==40.4.0", + "python-stdnum==2.2", + "tenacity==9.1.4", + "matplotlib==3.10.8", + "psutil==7.2.2", 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src/python_boilerplate/common/profiling.py | 4 ++-- src/python_boilerplate/common/trace.py | 9 ++++----- .../configuration/application_configuration.py | 2 +- tests/conftest.py | 2 +- 7 files changed, 14 insertions(+), 18 deletions(-) diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index bf053df..850c4dc 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -34,10 +34,8 @@ repos: stages: [ pre-commit ] language: system # Ruff checks and fixes Python code for both /src and /tests directories - entry: uv run ruff check + entry: uv run ruff check --fix types: [ python ] - args: - - "--fix" - id: ruff-format name: Ruff Format stages: [ pre-commit ] diff --git a/src/python_boilerplate/common/asynchronization.py b/src/python_boilerplate/common/asynchronization.py index f08ba18..f8d6719 100644 --- a/src/python_boilerplate/common/asynchronization.py +++ b/src/python_boilerplate/common/asynchronization.py @@ -4,8 +4,9 @@ import functools import inspect from asyncio import Task +from collections.abc import Callable from concurrent.futures import Future -from typing import Any, Callable, TypeVar +from typing import Any from loguru import logger @@ -32,10 +33,7 @@ def done_callback(future: Future[Any] | Task[Any]) -> None: ) -R = TypeVar("R") - - -def async_function(func: Callable[..., R]) -> Callable[..., Future[R]]: +def async_function[R](func: Callable[..., R]) -> Callable[..., Future[R]]: """ An easy way to implement multi-tread feature with thread pool. diff --git a/src/python_boilerplate/common/debounce_throttle.py b/src/python_boilerplate/common/debounce_throttle.py index f01fdf1..bfa5554 100644 --- a/src/python_boilerplate/common/debounce_throttle.py +++ b/src/python_boilerplate/common/debounce_throttle.py @@ -2,7 +2,8 @@ import functools import time -from typing import Any, Callable, TypeVar +from collections.abc import Callable +from typing import Any, TypeVar from loguru import logger diff --git a/src/python_boilerplate/common/profiling.py b/src/python_boilerplate/common/profiling.py index 5bfa204..20f84f8 100644 --- a/src/python_boilerplate/common/profiling.py +++ b/src/python_boilerplate/common/profiling.py @@ -1,9 +1,9 @@ import functools import os import time -from collections.abc import Coroutine +from collections.abc import Callable, Coroutine from datetime import timedelta -from typing import Any, Callable, TypeVar +from typing import Any, TypeVar import psutil from loguru import logger diff --git a/src/python_boilerplate/common/trace.py b/src/python_boilerplate/common/trace.py index 36cafbe..a6f206e 100644 --- a/src/python_boilerplate/common/trace.py +++ b/src/python_boilerplate/common/trace.py @@ -1,8 +1,9 @@ import functools import inspect import json +from collections.abc import Callable from datetime import datetime -from typing import Any, Callable, TypeVar +from typing import Any from loguru import logger @@ -12,10 +13,8 @@ from python_boilerplate.repository.model.trace_log import TraceLog from python_boilerplate.repository.trace_log_repository import save -R = TypeVar("R") - -def async_trace(func: Callable[..., R]) -> Callable[..., R]: +def async_trace[R](func: Callable[..., R]) -> Callable[..., R]: """ The decorator is to trace Python function asynchronously, which writes trace_log data in different threads (thread pool). @@ -56,7 +55,7 @@ def wrapper(*arg: Any, **kwarg: Any) -> R: return wrapper -def trace(func: Callable[[Any], R]) -> Callable[[Any], R]: +def trace[R](func: Callable[[Any], R]) -> Callable[[Any], R]: """ The decorator to trace Python function synchronously, which will always record the end_time of the execution of a function in the same thread. diff --git a/src/python_boilerplate/configuration/application_configuration.py b/src/python_boilerplate/configuration/application_configuration.py index 1057ee6..c78ec86 100644 --- a/src/python_boilerplate/configuration/application_configuration.py +++ b/src/python_boilerplate/configuration/application_configuration.py @@ -1,7 +1,7 @@ +import tomllib from pathlib import Path from typing import Final -import tomllib from loguru import logger from pyhocon import ConfigFactory diff --git a/tests/conftest.py b/tests/conftest.py index 764ef1a..9cab67d 100644 --- a/tests/conftest.py +++ b/tests/conftest.py @@ -24,7 +24,7 @@ def pytest_html_report_title(report: Any) -> None: @pytest.fixture(autouse=True) -def auto_profile(request: Any) -> Generator[Any, Any, None]: +def auto_profile(request: Any) -> Generator[Any, Any]: """ Generate an HTML file for each test node in your test suite inside the .profiles directory. From 9e0e7df3806e82403ac6f9eca5ca2250ea56bc71 Mon Sep 17 00:00:00 2001 From: johnnymillergh Date: Sat, 14 Feb 2026 09:43:46 +0800 Subject: [PATCH 06/11] chore: add AGENTS.md with guidelines for AI agents and project setup --- AGENTS.md | 191 ++++++++++++++++++++++++++++++++++++++++++++++++++++++ 1 file changed, 191 insertions(+) create mode 100644 AGENTS.md diff --git a/AGENTS.md b/AGENTS.md new file mode 100644 index 0000000..ca9d664 --- /dev/null +++ b/AGENTS.md @@ -0,0 +1,191 @@ +# AGENTS.md + +Guidelines for AI agents working in this repository. + +## Build & Run Commands + +| Task | Command | +|------|---------| +| Install deps | `uv sync --extra test --extra dev --extra linter` | +| Run application | `uv run python -m python_boilerplate` | +| Lint (ruff) | `uv run ruff check .` | +| Lint auto-fix | `uv run ruff check --fix .` | +| Format | `uv run ruff format .` | +| Type check | `uv run mypy` | +| Install mypy stubs | `uv run mypy --install-types` | +| All tests | `uv run pytest --cov -n auto --benchmark-disable` | +| Single test file | `uv run pytest tests/test_python_boilerplate/common/test_profiling.py` | +| Single test func | `uv run pytest tests/test_python_boilerplate/common/test_profiling.py -k test_elapsed_time` | +| Tests with logging | `uv run pytest --log-cli-level=DEBUG --capture=no ` | +| Benchmarks only | `uv run pytest --capture=no --log-cli-level=ERROR -n 0 --benchmark-only` | +| Pre-commit (all) | `uv run pre-commit run --all-files` | + +## Project Structure + +``` +src/ + python_boilerplate/ + __init__.py # freeze_support() call for PyInstaller + __main__.py # Application entry point + common/ # Shared utilities (decorators, helpers) + configuration/ # App config, thread pool, logging, scheduler, DB + data_migration/ # Database migration scripts + demo/ # Example/demo scripts + message/ # Messaging (email) + repository/ # Data access layer (peewee ORM models + repos) + resources/ # Static resources (HOCON config files) + template/ # Jinja2 templates +tests/ + conftest.py # Global fixtures (auto_profile with pyinstrument) + test_python_boilerplate/ # Mirrors src/ structure exactly + common/ + configuration/ + demo/ + message/ + repository/ + template/ +``` + +Source lives in `src/` (setuptools `package-dir = {"" = "src"}`). Tests mirror the source tree under `tests/test_python_boilerplate/`. + +## Tool Configuration + +- **Python**: >=3.13.1, <3.14 (`target-version = "py313"`) +- **Package manager**: uv (with `uv.lock`) +- **Linter/Formatter**: Ruff 0.15.x (`lint.select = ["ALL"]` with specific ignores) +- **Type checker**: mypy (strict mode, pydantic plugin) +- **Test runner**: pytest with pytest-xdist (`-n auto`), pytest-cov, pytest-mock, pytest-asyncio, pytest-benchmark +- **Pre-commit hooks**: ruff import sort, ruff check --fix, ruff format, mypy, pytest (pre-commit stage), pytest-cov (pre-push stage) +- **Line length**: 120 characters +- **Indent**: 4 spaces, UTF-8, LF line endings + +## Code Style + +### Imports + +Imports are organized in three groups separated by blank lines, sorted by ruff (`I001`): + +```python +# 1. Standard library +import functools +import time +from collections.abc import Callable +from typing import Any + +# 2. Third-party +from loguru import logger + +# 3. Local (absolute imports only, no relative imports) +from python_boilerplate.common.common_function import json_serial +``` + +- Use `from collections.abc import Callable, Coroutine` (NOT `from typing import Callable`) +- Relative imports are banned (`ban-relative-imports = "all"` in ruff config) +- `__init__.py` files are mostly empty (no re-exports) + +### Type Annotations + +- All functions MUST have return type annotations (mypy `disallow_untyped_defs = true`) +- Use PEP 695 type parameter syntax for generic functions: `def foo[T](x: T) -> T:` (NOT `TypeVar`) +- Use `typing.Any` when dynamic types are unavoidable +- Use `typing.Final` for module-level constants +- Use `TYPE_CHECKING` guard for import-only types: `if TYPE_CHECKING: from _pytest.nodes import Node` +- Use `X | Y` union syntax (NOT `Union[X, Y]` or `Optional[X]`) + +### Naming Conventions + +- Files: `snake_case.py` +- Functions/variables: `snake_case` +- Classes: `PascalCase` +- Constants: `UPPER_SNAKE_CASE` with `Final` annotation +- Test files: `test_.py` mirroring source structure +- Test functions: `test_` or `test__` + +### Docstrings + +Sphinx/reST style with `:param:` and `:return:` directives: + +```python +def get_login_user() -> str: + """ + Get current login user who is using the OS. + + :param username: the username to look up + :return: the username + """ +``` + +- Opening `"""` on same line as summary for single-line docstrings +- Opening `"""` on first line with summary for multi-line docstrings +- One blank line between summary and `:param` block (when description exists) + +### Error Handling + +- Catch specific exceptions, log with `logger.exception()` or `logger.error()` +- Re-raise after logging: `raise e` (do not swallow) +- Use `pytest.raises` for testing expected exceptions +- Pattern: try/execute/except-log-raise/finally-cleanup + +```python +try: + return func(*arg, **kwarg) +except Exception as e: + logger.warning(f"Captured exception. {e}") + raise e +finally: + cleanup() +``` + +### Logging + +- Use `loguru.logger` exclusively (NOT stdlib `logging`) +- f-string formatting in log messages: `logger.info(f"Result: {value}")` +- Available levels: TRACE, DEBUG, INFO, WARNING, ERROR + +### Decorators + +This codebase makes heavy use of function decorators in `src/python_boilerplate/common/`: + +- `@async_function` - Run sync function in thread pool, returns `Future` +- `@async_function_wrapper` - Add done_callback to async function +- `@elapsed_time(level="INFO")` - Profile function timing +- `@async_elapsed_time(level="INFO")` - Profile async function timing +- `@mem_profile()` / `@cpu_profile()` - Resource profiling +- `@peewee_table` - Register ORM table class +- `@trace` / `@async_trace` - Function call tracing to DB +- `@debounce(wait)` / `@throttle(limit)` - Rate limiting + +### Testing + +- Test files mirror source: `src/.../foo.py` -> `tests/test_python_boilerplate/.../test_foo.py` +- Use `pytest.fixture` for setup; `conftest.py` has `auto_profile` fixture (runs pyinstrument on every test) +- Use `pytest-mock` (`MockerFixture`) for mocking/spying +- Async tests use `@pytest.mark.asyncio` +- Name pattern: `--pytest-test-first` enforced (functions must start with `test_`) +- Coverage target: 90% (enforced in pre-push hook) + +### Ruff Ignored Rules + +Key intentionally-ignored lint rules (do NOT "fix" these patterns): + +- `ANN401` - `typing.Any` is allowed in `*args`/`**kwargs` +- `D100-D104,D106` - Missing docstrings in public modules/classes/functions are allowed +- `EM101,EM102` - String literals in exceptions are OK +- `PLR2004` - Magic values in comparisons are OK +- `COM812` - Trailing commas are not enforced +- `S311` - Pseudo-random generators are OK +- `TRY003,TRY201` - Exception message style is relaxed + +Test files (`tests/*`) additionally ignore: `ANN` (annotations), `ARG` (unused args), `INP001`, `S101` (assert). + +## CI Pipeline + +GitHub Actions (`python-ci-with-uv.yml`) runs on push to main/develop/feature/release/hotfix branches: + +1. `uv run ruff check .` (no `--fix` in CI - must pass clean) +2. `uv run mypy` (after installing types) +3. `uv run pytest --quiet --cov --cov-report term -n auto --benchmark-disable` +4. `uv run pytest --benchmark-only` (benchmarks separate) +5. Application smoke test + +Note: CI runs `ruff check` WITHOUT `--fix`. Code must pass lint cleanly before push. From 0c5f222b75ca70f0336986cf18829ce13590629c Mon Sep 17 00:00:00 2001 From: Johnny Miller Date: Sat, 14 Feb 2026 09:48:58 +0800 Subject: [PATCH 07/11] refactor: update peewee_table decorator to use type variable syntax --- pyproject.toml | 1 + src/python_boilerplate/common/orm.py | 7 +------ 2 files changed, 2 insertions(+), 6 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 3d69947..e1a019f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -149,6 +149,7 @@ max-complexity = 10 "ANN", "ARG", "INP001", + "PLC0415", "S101", ] diff --git a/src/python_boilerplate/common/orm.py b/src/python_boilerplate/common/orm.py index fafe940..14d911a 100644 --- a/src/python_boilerplate/common/orm.py +++ b/src/python_boilerplate/common/orm.py @@ -1,15 +1,10 @@ -from typing import TypeVar - from loguru import logger from python_boilerplate.configuration.peewee_configuration import DATABASE from python_boilerplate.repository.model.base_model import BaseModel -# `bound` argument forces that the type can be any subtype of BaseModel -T = TypeVar("T", bound=BaseModel) - -def peewee_table(clazz: type[T]) -> type[T]: +def peewee_table[T: BaseModel](clazz: type[T]) -> type[T]: """ The decorator to register peewee tables. Creates the table if not exists. From 53a88f18b56f6b8a9c120a1f1086771c6d09152d Mon Sep 17 00:00:00 2001 From: Johnny Miller Date: Sat, 14 Feb 2026 09:56:51 +0800 Subject: [PATCH 08/11] fix(tests): use fully-qualified imports to resolve mypy attr-defined errors - Change 'import test_python_boilerplate' to fully-qualified module imports in test_debounce_throttle.py and test_apscheduler_configuration.py so mypy can resolve the attr-defined references for mocker.spy() - Add PLW0406 to per-file-ignores for tests/ since fully-qualified self-imports trigger the module-imports-itself warning --- pyproject.toml | 1 + .../common/test_debounce_throttle.py | 4 ++-- .../configuration/test_apscheduler_configuration.py | 6 +++--- 3 files changed, 6 insertions(+), 5 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index e1a019f..1d47a43 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -150,6 +150,7 @@ max-complexity = 10 "ARG", "INP001", "PLC0415", + "PLW0406", "S101", ] diff --git a/tests/test_python_boilerplate/common/test_debounce_throttle.py b/tests/test_python_boilerplate/common/test_debounce_throttle.py index 055c88d..961545a 100644 --- a/tests/test_python_boilerplate/common/test_debounce_throttle.py +++ b/tests/test_python_boilerplate/common/test_debounce_throttle.py @@ -15,7 +15,7 @@ def test_debounce(mocker: MockFixture) -> None: - import test_python_boilerplate + import test_python_boilerplate.common.test_debounce_throttle spy = mocker.spy(test_python_boilerplate.common.test_debounce_throttle, "debounce_function") call_count: int = 3 @@ -38,7 +38,7 @@ def test_debounce(mocker: MockFixture) -> None: def test_throttle(mocker: MockFixture) -> None: - import test_python_boilerplate + import test_python_boilerplate.common.test_debounce_throttle spy = mocker.spy(test_python_boilerplate.common.test_debounce_throttle, "throttle_function") call_count: int = 5 diff --git a/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py b/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py index 8aaec06..edacbbb 100644 --- a/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py +++ b/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py @@ -31,15 +31,15 @@ def timed_job_with_args(a_int: int, a_string: str) -> None: def test_scheduler_when_adding_in_interval_job(mocker: MockFixture) -> None: if not scheduler.running: scheduler.start() - import test_python_boilerplate + import test_python_boilerplate.configuration.test_apscheduler_configuration timed_job_spy = mocker.spy( test_python_boilerplate.configuration.test_apscheduler_configuration, - "timed_job" + "timed_job", ) timed_job_with_args_spy = mocker.spy( test_python_boilerplate.configuration.test_apscheduler_configuration, - "timed_job_with_args" + "timed_job_with_args", ) try: scheduler.add_job(func=timed_job, trigger="interval", seconds=1) From 824e3432948154b6b48647c1cc5bdd2908b518ae Mon Sep 17 00:00:00 2001 From: Johnny Miller Date: Sat, 14 Feb 2026 10:18:10 +0800 Subject: [PATCH 09/11] refactor(tests): replace self-import spy pattern with sys.modules[__name__] The test modules were importing themselves (e.g., import test_python_boilerplate.common.test_debounce_throttle) solely to pass the module to mocker.spy(). This triggered PLW0406 (module-imports-itself) and PLC0415 (import-not-at-top-level) lint suppressions. Replace with the idiomatic sys.modules[__name__] pattern and remove the now-unnecessary PLW0406/PLC0415 entries from pyproject.toml per-file-ignores. --- pyproject.toml | 2 -- .../common/test_common_function.py | 4 ++-- .../common/test_debounce_throttle.py | 9 +++------ .../configuration/test_apscheduler_configuration.py | 13 +++---------- 4 files changed, 8 insertions(+), 20 deletions(-) diff --git a/pyproject.toml b/pyproject.toml index 1d47a43..3d69947 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -149,8 +149,6 @@ max-complexity = 10 "ANN", "ARG", "INP001", - "PLC0415", - "PLW0406", "S101", ] diff --git a/tests/test_python_boilerplate/common/test_common_function.py b/tests/test_python_boilerplate/common/test_common_function.py index 858504c..fa49ad8 100644 --- a/tests/test_python_boilerplate/common/test_common_function.py +++ b/tests/test_python_boilerplate/common/test_common_function.py @@ -1,3 +1,5 @@ +import getpass + from loguru import logger from pytest_benchmark.fixture import BenchmarkFixture from pytest_mock import MockerFixture @@ -21,8 +23,6 @@ def test_get_cpu_count_when_cpu_count_is_none_then_returns_4( def test_get_login_user(mocker: MockerFixture) -> None: # pytest-mock, spy, https://pytest-mock.readthedocs.io/en/latest/usage.html#spy - import getpass - spy = mocker.spy(getpass, "getuser") login_user = get_login_user() assert len(login_user) > 0 diff --git a/tests/test_python_boilerplate/common/test_debounce_throttle.py b/tests/test_python_boilerplate/common/test_debounce_throttle.py index 961545a..1a8b186 100644 --- a/tests/test_python_boilerplate/common/test_debounce_throttle.py +++ b/tests/test_python_boilerplate/common/test_debounce_throttle.py @@ -1,3 +1,4 @@ +import sys from time import sleep import pytest @@ -15,9 +16,7 @@ def test_debounce(mocker: MockFixture) -> None: - import test_python_boilerplate.common.test_debounce_throttle - - spy = mocker.spy(test_python_boilerplate.common.test_debounce_throttle, "debounce_function") + spy = mocker.spy(sys.modules[__name__], "debounce_function") call_count: int = 3 while call_count > 0: debounce_function(call_count) @@ -38,9 +37,7 @@ def test_debounce(mocker: MockFixture) -> None: def test_throttle(mocker: MockFixture) -> None: - import test_python_boilerplate.common.test_debounce_throttle - - spy = mocker.spy(test_python_boilerplate.common.test_debounce_throttle, "throttle_function") + spy = mocker.spy(sys.modules[__name__], "throttle_function") call_count: int = 5 try: while call_count > 0: diff --git a/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py b/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py index edacbbb..c138ac5 100644 --- a/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py +++ b/tests/test_python_boilerplate/configuration/test_apscheduler_configuration.py @@ -1,3 +1,4 @@ +import sys from time import sleep import pytest @@ -31,16 +32,8 @@ def timed_job_with_args(a_int: int, a_string: str) -> None: def test_scheduler_when_adding_in_interval_job(mocker: MockFixture) -> None: if not scheduler.running: scheduler.start() - import test_python_boilerplate.configuration.test_apscheduler_configuration - - timed_job_spy = mocker.spy( - test_python_boilerplate.configuration.test_apscheduler_configuration, - "timed_job", - ) - timed_job_with_args_spy = mocker.spy( - test_python_boilerplate.configuration.test_apscheduler_configuration, - "timed_job_with_args", - ) + timed_job_spy = mocker.spy(sys.modules[__name__], "timed_job") + timed_job_with_args_spy = mocker.spy(sys.modules[__name__], "timed_job_with_args") try: scheduler.add_job(func=timed_job, trigger="interval", seconds=1) scheduler.add_job(func=timed_job_with_args, trigger="interval", seconds=1, args=(200, "OK")) From 4c97ec0025562bd71ed785648492eb662a1b2c03 Mon Sep 17 00:00:00 2001 From: Johnny Miller Date: Sat, 14 Feb 2026 10:18:42 +0800 Subject: [PATCH 10/11] fix(tests): skip pyinstrument profiling for benchmark tests pyinstrument 5.1.2 uses a C-level ProfilerState object via sys.setprofile() that is not a callable Python function. pytest-benchmark's PauseInstrumentation saves and restores the profiler via sys.setprofile(), which fails with TypeError on the non-callable ProfilerState. Skip the auto_profile fixture for tests using the benchmark fixture, since profiling during benchmarks is counterproductive anyway (adds overhead that corrupts measurements). --- tests/conftest.py | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/tests/conftest.py b/tests/conftest.py index 9cab67d..a05f627 100644 --- a/tests/conftest.py +++ b/tests/conftest.py @@ -28,8 +28,16 @@ def auto_profile(request: Any) -> Generator[Any, Any]: """ Generate an HTML file for each test node in your test suite inside the .profiles directory. + Skips profiling for benchmark tests to avoid incompatibility between pyinstrument's + C-level ProfilerState and pytest-benchmark's PauseInstrumentation (which calls + ``sys.setprofile()`` with the non-callable ProfilerState object). + https://pyinstrument.readthedocs.io/en/latest/guide.html#profile-pytest-tests """ + if "benchmark" in request.fixturenames: + yield + return + profile_root = PROJECT__ROOT / "build/.profiles" logger.info("Starting to profile Pytest unit tests...") # Turn profiling on From 449432df4786ea3b0a7fd2c518b098713ebb8172 Mon Sep 17 00:00:00 2001 From: Johnny Miller Date: Sat, 14 Feb 2026 23:29:10 +0800 Subject: [PATCH 11/11] refactor: modernize codebase with PEP 695 syntax, DRY profiling, and deferred side effects - Adopt PEP 695 type parameter syntax in profiling.py and debounce_throttle.py - Remove unnecessary `from __future__ import annotations` in asynchronization.py and debounce_throttle.py - Extract _make_profile_decorator factory to DRY elapsed_time, mem_profile, and cpu_profile - Defer loguru handler setup into configure() and SMTP login into init_smtp() - Rename retain_log_files to _retain_log_files (private, called only by configure) - Fix stale README: consolidate black/isort/flake8 references to Ruff, remove duplicate poetry section, fix Python badge - Bump actions/checkout v2/v3 to v4, docker-build-with-cache-action v2 to v6 - Add py.typed marker for PEP 561 compliance --- .github/workflows/publish-docker.yml | 4 +- .github/workflows/python-ci-with-uv.yml | 8 +- README.md | 54 +------ .../common/asynchronization.py | 2 - .../common/debounce_throttle.py | 10 +- src/python_boilerplate/common/profiling.py | 132 +++++++----------- src/python_boilerplate/message/email.py | 15 +- src/python_boilerplate/py.typed | 0 8 files changed, 76 insertions(+), 149 deletions(-) create mode 100644 src/python_boilerplate/py.typed diff --git a/.github/workflows/publish-docker.yml b/.github/workflows/publish-docker.yml index 41017be..aaa28e5 100644 --- a/.github/workflows/publish-docker.yml +++ b/.github/workflows/publish-docker.yml @@ -8,10 +8,10 @@ jobs: docker: runs-on: ubuntu-latest steps: - - uses: actions/checkout@v2 + - uses: actions/checkout@v4 - name: Publish to GitHub Packages - uses: whoan/docker-build-with-cache-action@v2 + uses: whoan/docker-build-with-cache-action@v6 with: registry: docker.pkg.github.com username: ${{ github.actor }} diff --git a/.github/workflows/python-ci-with-uv.yml b/.github/workflows/python-ci-with-uv.yml index 75ccbb9..aadbf5d 100644 --- a/.github/workflows/python-ci-with-uv.yml +++ b/.github/workflows/python-ci-with-uv.yml @@ -33,7 +33,7 @@ jobs: static-code-analysis: runs-on: ubuntu-latest steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - uses: ./.github/actions/project-environment-setup - run: uv run ruff check . - name: Install mypy types @@ -53,7 +53,7 @@ jobs: needs: static-code-analysis runs-on: ubuntu-latest steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - uses: ./.github/actions/project-environment-setup - name: Build Application Executable Package with PyInstaller run: | @@ -71,7 +71,7 @@ jobs: needs: static-code-analysis runs-on: ubuntu-latest steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - name: Build Docker Image run: | docker build . -t python_boilerplate:smoke-test-tag @@ -84,7 +84,7 @@ jobs: check-versions: runs-on: ubuntu-latest steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - uses: ./.github/actions/project-environment-setup - name: Check Versions of Python Packages run: | diff --git a/README.md b/README.md index 3d72c81..8e3d638 100644 --- a/README.md +++ b/README.md @@ -21,7 +21,7 @@ Here are the highlights of **python_boilerplate**: 1. Inherited from modern and the latest Python technologies: - `Python` - [![Python](https://img.shields.io/badge/Python-v3.13.7-blue)](https://www.python.org/downloads/release/python-3131/) + `Python` - [![Python](https://img.shields.io/badge/Python-v3.13-blue)](https://www.python.org/downloads/) `uv` is a fast Python package installer and dependency management tool for the project. @@ -44,21 +44,17 @@ Here are the highlights of **python_boilerplate**: 10. Testing with [pytest](https://docs.pytest.org/en/latest/), integrating [pytest-mock](https://pypi.org/project/pytest-mock/) for mocking, [pytest-cov](https://pypi.org/project/pytest-cov/) for code coverage analysis and [pyinstrument](https://github.com/joerick/pyinstrument) for Python stack profiler. -11. Formatting with [black](https://github.com/psf/black). +11. Linting, formatting, and import sorting with [Ruff](https://docs.astral.sh/ruff/). -12. Import sorting with [isort](https://github.com/timothycrosley/isort). +12. Static typing with [mypy](http://mypy-lang.org/). -13. Static typing with [mypy](http://mypy-lang.org/). +13. Git hooks that run all the above with [pre-commit](https://pre-commit.com/). -14. Linting with [flake8](http://flake8.pycqa.org/en/latest/). +14. Deployment ready with [Docker](https://docker.com/). -15. Git hooks that run all the above with [pre-commit](https://pre-commit.com/). +15. Continuous Integration with [GitHub Actions](https://github.com/features/actions). -16. Deployment ready with [Docker](https://docker.com/). - -17. Continuous Integration with [GitHub Actions](https://github.com/features/actions). - -18. Loguru logging configuration. The log sample, +16. Loguru logging configuration. The log sample, ``` 2022-09-17 14:13:52.385 | ⚠️ WARNING | 6860 | MainThread | python_boilerplate.repository.model.base_model.:24 - SQLite database created. Path: [/Users/johnny/Projects/PyCharmProjects/python_boilerplate/data/python_boilerplate.db], @@ -156,42 +152,6 @@ $ $env:PYTHONPATH=$PWD.Path; uv run python .\python_boilerplate\demo\multithread $ $env:PYTHONPATH=$PWD.Path; uv run python .\python_boilerplate\__main__.py ``` -### Run Python Script - -**Append your project’s root directory to** `PYTHONPATH` — In any environment you wish to run your Python application such as Docker, vagrant or your virtual environment i.e. in bin/activate, run the below command: - -> [How to Fix ModuleNotFoundError and ImportError](https://towardsdatascience.com/how-to-fix-modulenotfounderror-and-importerror-248ce5b69b1c) - -For macOS or Linux, - -```shell -# Ensure `pwd` is the root directory of the project -$ PYTHONPATH=`pwd` poetry run python3 python_boilerplate/demo/pandas_usage.py -$ PYTHONPATH=`pwd` poetry run python3 python_boilerplate/demo/multithread_and_thread_pool_usage.py - -# Run the main module -$ PYTHONPATH=`pwd` poetry run python3 python_boilerplate/__main__.py - -# Run a pytest script -$ pytest --log-cli-level=DEBUG --capture=no tests/common/test_debounce_throttle.py - -# Run a pytest script with `-k` EXPRESSION -$ pytest --log-cli-level=DEBUG --capture=no tests/common/test_debounce_throttle.py -k 'test_debounce' - -# For more details of pytest command -$ poetry run pytest --help -``` - -For Windows Terminal, -```powershell -# Ensure `$PWD.Path` is the root directory of the project -$ $env:PYTHONPATH=$PWD.Path; poetry run python .\python_boilerplate\demo\pandas_usage.py -$ $env:PYTHONPATH=$PWD.Path; poetry run python .\python_boilerplate\demo\multithread_and_thread_pool_usage.py - -# Run the main module -$ $env:PYTHONPATH=$PWD.Path; poetry run python .\python_boilerplate\__main__.py -``` - ### Package with [PyInstaller](https://pyinstaller.org/en/latest/usage.html?highlight=pythonpath#using-pyinstaller) > **⚠️ WANRING** diff --git a/src/python_boilerplate/common/asynchronization.py b/src/python_boilerplate/common/asynchronization.py index f8d6719..33dbfff 100644 --- a/src/python_boilerplate/common/asynchronization.py +++ b/src/python_boilerplate/common/asynchronization.py @@ -1,5 +1,3 @@ -from __future__ import annotations - import asyncio import functools import inspect diff --git a/src/python_boilerplate/common/debounce_throttle.py b/src/python_boilerplate/common/debounce_throttle.py index bfa5554..3f121bb 100644 --- a/src/python_boilerplate/common/debounce_throttle.py +++ b/src/python_boilerplate/common/debounce_throttle.py @@ -1,16 +1,12 @@ -from __future__ import annotations - import functools import time from collections.abc import Callable -from typing import Any, TypeVar +from typing import Any from loguru import logger -R = TypeVar("R") - -def debounce(wait: float) -> Callable[..., Callable[..., R | None]]: +def debounce[R](wait: float) -> Callable[..., Callable[..., R | None]]: """ Debounce function decorator. @@ -38,7 +34,7 @@ def wrapper(*args: Any, **kwargs: Any) -> R | None: return decorator -def throttle(limit: float) -> Callable[..., Callable[..., R | None]]: +def throttle[R](limit: float) -> Callable[..., Callable[..., R | None]]: """ Throttle function decorator. diff --git a/src/python_boilerplate/common/profiling.py b/src/python_boilerplate/common/profiling.py index 20f84f8..73d899a 100644 --- a/src/python_boilerplate/common/profiling.py +++ b/src/python_boilerplate/common/profiling.py @@ -3,15 +3,48 @@ import time from collections.abc import Callable, Coroutine from datetime import timedelta -from typing import Any, TypeVar +from typing import Any import psutil from loguru import logger -R = TypeVar("R") +def _make_profile_decorator[R]( + get_metric: Callable[[], Any], + format_message: Callable[[str, Any, Any], str], + level: str = "INFO", +) -> Callable[..., Callable[..., R]]: + """ + Generic factory for sync profiling decorators. + + Captures a metric before and after function execution, then logs the formatted result. + + :param get_metric: callable returning the metric value (called before and after execution) + :param format_message: callable(qualname, before, after) -> log message string + :param level: logging level + :return: a decorator that wraps a function with before/after metric capture and logging + """ + + def decorator(func: Callable[..., R]) -> Callable[..., R]: + @functools.wraps(func) + def wrapper(*arg: Any, **kwarg: Any) -> Any: + before = get_metric() + try: + return_value = func(*arg, **kwarg) + except Exception as e: + after = get_metric() + logger.log(level, format_message(func.__qualname__, before, after)) + raise e + after = get_metric() + logger.log(level, format_message(func.__qualname__, before, after)) + return return_value + + return wrapper + + return decorator -def elapsed_time(level: str = "INFO") -> Callable[..., Callable[..., R]]: + +def elapsed_time[R](level: str = "INFO") -> Callable[..., Callable[..., R]]: """ The decorator to monitor the elapsed time of a function. @@ -32,33 +65,13 @@ def elapsed_time(level: str = "INFO") -> Callable[..., Callable[..., R]]: :param level: logging level, default is "INFO". Available values: ["TRACE", "DEBUG", "INFO", "WARNING", "ERROR"] """ - def decorator(func: Callable[..., R]) -> Callable[..., R]: - @functools.wraps(func) - def wrapper(*arg: Any, **kwarg: Any) -> Any: - start_time = time.perf_counter() - try: - return_value = func(*arg, **kwarg) - except Exception as e: - logger.exception(f"Exception raised when executing function: {func.__qualname__}(). Exception: {e}") - elapsed = time.perf_counter() - start_time - logger.log( - level, - f"{func.__qualname__}() -> elapsed time: {timedelta(seconds=elapsed)}", - ) - raise e - elapsed = time.perf_counter() - start_time - logger.log( - level, - f"{func.__qualname__}() -> elapsed time: {timedelta(seconds=elapsed)}", - ) - return return_value + def _format(qualname: str, before: Any, after: Any) -> str: + return f"{qualname}() -> elapsed time: {timedelta(seconds=after - before)}" - return wrapper - - return decorator + return _make_profile_decorator(get_metric=time.perf_counter, format_message=_format, level=level) -def async_elapsed_time( +def async_elapsed_time[R]( level: str = "INFO", ) -> Callable[..., Callable[..., Coroutine[Any, Any, R]]]: """ @@ -126,7 +139,7 @@ def get_cpu_usage() -> float: return psutil.cpu_percent() -def mem_profile(level: str = "INFO") -> Callable[..., Callable[..., R]]: +def mem_profile[R](level: str = "INFO") -> Callable[..., Callable[..., R]]: """ The decorator to monitor the memory usage of a function. @@ -147,46 +160,28 @@ def mem_profile(level: str = "INFO") -> Callable[..., Callable[..., R]]: :param level: logging level, default is "INFO". Available values: ["TRACE", "DEBUG", "INFO", "WARNING", "ERROR"] """ - def decorator(func: Callable[..., R]) -> Callable[..., R]: - @functools.wraps(func) - def wrapper(*arg: Any, **kwarg: Any) -> Any: - mem_before = get_memory_usage() - try: - return_value = func(*arg, **kwarg) - except Exception as e: - mem_after = get_memory_usage() - logger.log( - level, - f"{func.__qualname__}() -> Mem before: {mem_before}, mem after: {mem_after}. " - f"Consumed memory: {(mem_after - mem_before) / (1024 * 1024):.2f} MB", - ) - raise e - mem_after = get_memory_usage() - logger.log( - level, - f"{func.__qualname__}() -> Mem before: {mem_before}, mem after: {mem_after}. " - f"Consumed memory: {(mem_after - mem_before) / (1024 * 1024):.2f} MB", - ) - return return_value - - return wrapper + def _format(qualname: str, before: Any, after: Any) -> str: + return ( + f"{qualname}() -> Mem before: {before}, mem after: {after}. " + f"Consumed memory: {(after - before) / (1024 * 1024):.2f} MB" + ) - return decorator + return _make_profile_decorator(get_metric=get_memory_usage, format_message=_format, level=level) -def cpu_profile(level: str = "INFO") -> Callable[..., Callable[..., R]]: +def cpu_profile[R](level: str = "INFO") -> Callable[..., Callable[..., R]]: """ The decorator to monitor the CPU usage of a function. Usage: - * decorate the function with `@mem_profile()` to profile the function with INFO log + * decorate the function with `@cpu_profile()` to profile the function with INFO log >>> @cpu_profile() >>> def some_function(): >>> pass * decorate the function with `@cpu_profile("DEBUG")` to profile the function with DEBUG log - >>> @mem_profile("DEBUG") + >>> @cpu_profile("DEBUG") >>> def some_function(): >>> pass @@ -195,28 +190,7 @@ def cpu_profile(level: str = "INFO") -> Callable[..., Callable[..., R]]: :param level: logging level, default is "INFO". Available values: ["TRACE", "DEBUG", "INFO", "WARNING", "ERROR"] """ - def decorator(func: Callable[..., R]) -> Callable[..., R]: - @functools.wraps(func) - def wrapper(*arg: Any, **kwarg: Any) -> Any: - cpu_before = get_cpu_usage() - try: - return_value = func(*arg, **kwarg) - except Exception as e: - cpu_after = get_cpu_usage() - logger.log( - level, - f"{func.__qualname__}() -> CPU before: {cpu_before}, CPU after: {cpu_after}, " - f"delta: {(cpu_after - cpu_before):.2f}", - ) - raise e - cpu_after = get_cpu_usage() - logger.log( - level, - f"{func.__qualname__}() -> CPU before: {cpu_before}, CPU after: {cpu_after}, " - f"delta: {(cpu_after - cpu_before):.2f}", - ) - return return_value - - return wrapper + def _format(qualname: str, before: Any, after: Any) -> str: + return f"{qualname}() -> CPU before: {before}, CPU after: {after}, delta: {(after - before):.2f}" - return decorator + return _make_profile_decorator(get_metric=get_cpu_usage, format_message=_format, level=level) diff --git a/src/python_boilerplate/message/email.py b/src/python_boilerplate/message/email.py index dac2d64..287e3ff 100644 --- a/src/python_boilerplate/message/email.py +++ b/src/python_boilerplate/message/email.py @@ -23,17 +23,16 @@ _smtp: smtplib.SMTP -if _email_muted or _email_muted is None: - logger.warning(_muted_message) -else: - # Login to the email server + +def init_smtp() -> None: + """Initialize the email module and log in to the SMTP server (no-op when muted).""" + global _smtp + if _email_muted or _email_muted is None: + logger.warning(_muted_message) + return _smtp = smtplib.SMTP(_host, _port) _smtp.connect(_host, 25) _smtp.login(_sender, _password) - - -def init_smtp() -> None: - """Initializes the email module.""" logger.warning(f"Initialized email module and logged in to the email server: {_host}") diff --git a/src/python_boilerplate/py.typed b/src/python_boilerplate/py.typed new file mode 100644 index 0000000..e69de29