diff --git a/workflow-templates/docs-ci.yaml b/workflow-templates/docs-ci.yaml
index f813cea..d6e330d 100644
--- a/workflow-templates/docs-ci.yaml
+++ b/workflow-templates/docs-ci.yaml
@@ -7,3 +7,6 @@ on:
 jobs:
   ci:
     uses: nextstrain/.github/.github/workflows/docs-ci.yaml@master
+    with:
+      docs-directory: docs/
+      environment-file: docs/conda.yml
diff --git a/workflow-templates/pathogen-repo-ci.yaml b/workflow-templates/pathogen-repo-ci.yaml
index d63da24..b1f5bca 100644
--- a/workflow-templates/pathogen-repo-ci.yaml
+++ b/workflow-templates/pathogen-repo-ci.yaml
@@ -7,6 +7,3 @@ on:
 jobs:
   ci:
     uses: nextstrain/.github/.github/workflows/pathogen-repo-ci.yaml@master
-    with:
-      docs-directory: docs/
-      environment-file: docs/conda.yml