[ArrayManager] TST: enable IO tests (#40298)

Author: jorisvandenbossche

.github/workflows/ci.yml

@@ -185,6 +185,12 @@ jobs:
         pytest pandas/tests/dtypes/
         pytest pandas/tests/generic/
         pytest pandas/tests/indexes/
+        pytest pandas/tests/io/test_* -m "not slow and not clipboard"
+        pytest pandas/tests/io/excel/ -m "not slow and not clipboard"
+        pytest pandas/tests/io/formats/ -m "not slow and not clipboard"
+        pytest pandas/tests/io/parser/ -m "not slow and not clipboard"
+        pytest pandas/tests/io/sas/ -m "not slow and not clipboard"
+        pytest pandas/tests/io/xml/ -m "not slow and not clipboard"
         pytest pandas/tests/libs/
         pytest pandas/tests/plotting/
         pytest pandas/tests/scalar/

pandas/tests/io/pytables/test_append.py

@@ -7,6 +7,7 @@
 import pytest
 
 from pandas._libs.tslibs import Timestamp
+import pandas.util._test_decorators as td
 
 import pandas as pd
 from pandas import (
@@ -24,7 +25,7 @@
     ensure_clean_store,
 )
 
-pytestmark = pytest.mark.single
+pytestmark = [pytest.mark.single, td.skip_array_manager_not_yet_implemented]
 
 
 @pytest.mark.filterwarnings("ignore:object name:tables.exceptions.NaturalNameWarning")

pandas/tests/io/pytables/test_categorical.py

@@ -1,6 +1,8 @@
 import numpy as np
 import pytest
 
+import pandas.util._test_decorators as td
+
 from pandas import (
     Categorical,
     DataFrame,
@@ -15,7 +17,7 @@
     ensure_clean_store,
 )
 
-pytestmark = pytest.mark.single
+pytestmark = [pytest.mark.single, td.skip_array_manager_not_yet_implemented]
 
 
 def test_categorical(setup_path):

pandas/tests/io/pytables/test_compat.py

@@ -1,11 +1,15 @@
 import pytest
 
+import pandas.util._test_decorators as td
+
 import pandas as pd
 import pandas._testing as tm
 from pandas.tests.io.pytables.common import ensure_clean_path
 
 tables = pytest.importorskip("tables")
 
+pytestmark = td.skip_array_manager_not_yet_implemented
+
 
 @pytest.fixture
 def pytables_hdf5_file():

pandas/tests/io/pytables/test_errors.py

@@ -6,6 +6,8 @@
 import numpy as np
 import pytest
 
+import pandas.util._test_decorators as td
+
 from pandas import (
     CategoricalIndex,
     DataFrame,
@@ -25,7 +27,7 @@
     _maybe_adjust_name,
 )
 
-pytestmark = pytest.mark.single
+pytestmark = [pytest.mark.single, td.skip_array_manager_not_yet_implemented]
 
 
 def test_pass_spec_to_storer(setup_path):

pandas/tests/io/pytables/test_file_handling.py

@@ -4,6 +4,7 @@
 import pytest
 
 from pandas.compat import is_platform_little_endian
+import pandas.util._test_decorators as td
 
 from pandas import (
     DataFrame,
@@ -26,7 +27,7 @@
     Term,
 )
 
-pytestmark = pytest.mark.single
+pytestmark = [pytest.mark.single, td.skip_array_manager_not_yet_implemented]
 
 
 def test_mode(setup_path):

pandas/tests/io/pytables/test_keys.py

@@ -1,5 +1,7 @@
 import pytest
 
+import pandas.util._test_decorators as td
+
 from pandas import (
     DataFrame,
     HDFStore,
@@ -11,7 +13,7 @@
     tables,
 )
 
-pytestmark = pytest.mark.single
+pytestmark = [pytest.mark.single, td.skip_array_manager_not_yet_implemented]
 
 
 def test_keys(setup_path):

pandas/tests/io/pytables/test_put.py

@@ -29,7 +29,7 @@
 )
 from pandas.util import _test_decorators as td
 
-pytestmark = pytest.mark.single
+pytestmark = [pytest.mark.single, td.skip_array_manager_not_yet_implemented]
 
 
 def test_format_type(setup_path):

pandas/tests/io/pytables/test_pytables_missing.py

@@ -5,6 +5,8 @@
 import pandas as pd
 import pandas._testing as tm
 
+pytestmark = td.skip_array_manager_not_yet_implemented
+
 
 @td.skip_if_installed("tables")
 def test_pytables_raises():

pandas/tests/io/pytables/test_read.py

@@ -25,7 +25,7 @@
 
 from pandas.io.pytables import TableIterator
 
-pytestmark = pytest.mark.single
+pytestmark = [pytest.mark.single, td.skip_array_manager_not_yet_implemented]
 
 
 def test_read_missing_key_close_store(setup_path):