Add setup-conda action (#46611)

* Add run-tests and setup-pandas actions

* Undo run-tests

* Use setup-pandas in docbuild

* Update docbuild-and-upload.yml

* Update macos-windows.yml

* Update docbuild-and-upload.yml

* Update action.yml

* Create action.yml

* Delete .github/actions/setup-pandas directory

* Review feedback

* Update .github/workflows/macos-windows.yml

Co-authored-by: Matthew Roeschke <emailformattr@gmail.com>

Author: jonashaag

.circleci/config.yml

@@ -13,7 +13,7 @@ jobs:
       PANDAS_CI: "1"
     steps:
       - checkout
-      - run: ci/setup_env.sh
+      - run: .circleci/setup_env.sh
       - run: PATH=$HOME/miniconda3/envs/pandas-dev/bin:$HOME/miniconda3/condabin:$PATH ci/run_tests.sh
 
 workflows:

ci/setup_env.sh .circleci/setup_env.shci/setup_env.sh renamed to .circleci/setup_env.sh

@@ -0,0 +1,27 @@
+name: Set up Conda environment
+inputs:
+  environment-file:
+    description: Conda environment file to use.
+    default: environment.yml
+  pyarrow-version:
+    description: If set, overrides the PyArrow version in the Conda environment to the given string.
+    required: false
+runs:
+  using: composite
+  steps:
+    - name: Set Arrow version in ${{ inputs.environment-file }} to ${{ inputs.pyarrow-version }}
+      run: |
+        grep -q '  - pyarrow' ${{ inputs.environment-file }}
+        sed -i"" -e "s/  - pyarrow/  - pyarrow=${{ inputs.pyarrow-version }}/" ${{ inputs.environment-file }}
+        cat ${{ inputs.environment-file }}
+      shell: bash
+      if: ${{ inputs.pyarrow-version }}
+
+    - name: Install ${{ inputs.environment-file }}
+      uses: conda-incubator/setup-miniconda@v2
+      with:
+        environment-file: ${{ inputs.environment-file }}
+        channel-priority: ${{ runner.os == 'macOS' && 'flexible' || 'strict' }}
+        channels: conda-forge
+        mamba-version: "0.23"
+        use-mamba: true

.github/actions/setup-conda/action.yml

@@ -24,43 +24,46 @@ jobs:
       group: ${{ github.event_name == 'push' && github.run_number || github.ref }}-web-docs
       cancel-in-progress: true
 
+    defaults:
+      run:
+        shell: bash -el {0}
+
     steps:
     - name: Checkout
       uses: actions/checkout@v3
       with:
         fetch-depth: 0
 
-    - name: Set up pandas
-      uses: ./.github/actions/setup
+    - name: Set up Conda
+      uses: ./.github/actions/setup-conda
+
+    - name: Build Pandas
+      uses: ./.github/actions/build_pandas
 
     - name: Build website
-      run: |
-        source activate pandas-dev
-        python web/pandas_web.py web/pandas --target-path=web/build
+      run: python web/pandas_web.py web/pandas --target-path=web/build
 
     - name: Build documentation
-      run: |
-        source activate pandas-dev
-        doc/make.py --warnings-are-errors
+      run: doc/make.py --warnings-are-errors
 
     - name: Install ssh key
       run: |
         mkdir -m 700 -p ~/.ssh
         echo "${{ secrets.server_ssh_key }}" > ~/.ssh/id_rsa
         chmod 600 ~/.ssh/id_rsa
         echo "${{ secrets.server_ip }} ecdsa-sha2-nistp256 AAAAE2VjZHNhLXNoYTItbmlzdHAyNTYAAAAIbmlzdHAyNTYAAABBBE1Kkopomm7FHG5enATf7SgnpICZ4W2bw+Ho+afqin+w7sMcrsa0je7sbztFAV8YchDkiBKnWTG4cRT+KZgZCaY=" > ~/.ssh/known_hosts
-      if: ${{github.event_name == 'push' && github.ref == 'refs/heads/main'}}
+      if: github.event_name == 'push' && github.ref == 'refs/heads/main'
 
     - name: Copy cheatsheets into site directory
       run: cp doc/cheatsheet/Pandas_Cheat_Sheet* web/build/
 
     - name: Upload web
       run: rsync -az --delete --exclude='pandas-docs' --exclude='docs' web/build/ docs@${{ secrets.server_ip }}:/usr/share/nginx/pandas
-      if: ${{github.event_name == 'push' && github.ref == 'refs/heads/main'}}
+      if: github.event_name == 'push' && github.ref == 'refs/heads/main'
 
     - name: Upload dev docs
       run: rsync -az --delete doc/build/html/ docs@${{ secrets.server_ip }}:/usr/share/nginx/pandas/pandas-docs/dev
-      if: ${{github.event_name == 'push' && github.ref == 'refs/heads/main'}}
+      if: github.event_name == 'push' && github.ref == 'refs/heads/main'
 
     - name: Move docs into site directory
       run: mv doc/build/html web/build/docs

.github/actions/setup/action.yml

@@ -43,32 +43,18 @@ jobs:
       with:
         fetch-depth: 0
 
-    - name: Install Dependencies
-      uses: conda-incubator/setup-miniconda@v2.1.1
+    - name: Set up Conda
+      uses: ./.github/actions/setup-conda
       with:
-        mamba-version: "*"
-        channels: conda-forge
-        activate-environment: pandas-dev
-        channel-priority: ${{ matrix.os == 'macos-latest' && 'flexible' || 'strict' }}
         environment-file: ci/deps/${{ matrix.env_file }}
-        use-only-tar-bz2: true
-
-    # ImportError: 2): Library not loaded: @rpath/libssl.1.1.dylib
-    # Referenced from: /Users/runner/miniconda3/envs/pandas-dev/lib/libthrift.0.13.0.dylib
-    # Reason: image not found
-    - name: Upgrade pyarrow on MacOS
-      run: conda install -n pandas-dev -c conda-forge --no-update-deps pyarrow=6
-      if: ${{ matrix.os == 'macos-latest' }}
+        pyarrow-version: ${{ matrix.os == 'macos-latest' && '6' || '' }}
 
     - name: Build Pandas
       uses: ./.github/actions/build_pandas
 
     - name: Test
       run: ci/run_tests.sh
 
-    - name: Build Version
-      run: conda list
-
     - name: Publish test results
       uses: actions/upload-artifact@v3
       with:

.github/workflows/docbuild-and-upload.yml

@@ -333,7 +333,7 @@ def run(self):
         extra_compile_args.append("/Z7")
         extra_link_args.append("/DEBUG")
 else:
-    # PANDAS_CI=1 is set by ci/setup_env.sh
+    # PANDAS_CI=1 is set in CI
     if os.environ.get("PANDAS_CI", "0") == "1":
         extra_compile_args.append("-Werror")
     if debugging_symbols_requested: