From 25976f2934ba3c58e87b9d72c1a0c14bbdcc2d7f Mon Sep 17 00:00:00 2001
From: cjwgriesel <cjwgriesel@gmail.com>
Date: Thu, 4 Apr 2024 13:13:55 +0100
Subject: [PATCH 1/7] issue 1110 mod completed

---
 process/io/mfile_comparison.py | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/process/io/mfile_comparison.py b/process/io/mfile_comparison.py
index 7a470cfda8..8656a7bae9 100755
--- a/process/io/mfile_comparison.py
+++ b/process/io/mfile_comparison.py
@@ -16,7 +16,7 @@
 """
 
 import sys
-import scipy
+import numpy
 import argparse
 import process.io.mfile as mf
 from numpy import isfinite
@@ -323,7 +323,7 @@ def main(arg):
         if "normres" in v:
             continue
 
-        values = scipy.zeros(n)
+        values = numpy.zeros(n)
 
         if v not in get_dicts()["DICT_VAR_TYPE"].keys():
             try:

From 6655c45e6ab7deee9550b77509f7eacfcfa4c0d3 Mon Sep 17 00:00:00 2001
From: cjwgriesel <cjwgriesel@gmail.com>
Date: Fri, 5 Apr 2024 11:50:46 +0100
Subject: [PATCH 2/7] added a mod

---
 process/io/mfile_comparison.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/process/io/mfile_comparison.py b/process/io/mfile_comparison.py
index 8656a7bae9..2a2c3acc7a 100755
--- a/process/io/mfile_comparison.py
+++ b/process/io/mfile_comparison.py
@@ -325,6 +325,7 @@ def main(arg):
 
         values = numpy.zeros(n)
 
+
         if v not in get_dicts()["DICT_VAR_TYPE"].keys():
             try:
                 eval(mfile_list[0].data[v].get_scan(-1))

From 842686913fed9de7e8e40c5f4ce66d2d2cb52bcc Mon Sep 17 00:00:00 2001
From: cjwgriesel <cjwgriesel@gmail.com>
Date: Fri, 5 Apr 2024 15:44:41 +0100
Subject: [PATCH 3/7] added correction

---
 process/io/mfile_comparison.py | 1 -
 1 file changed, 1 deletion(-)

diff --git a/process/io/mfile_comparison.py b/process/io/mfile_comparison.py
index 2a2c3acc7a..8656a7bae9 100755
--- a/process/io/mfile_comparison.py
+++ b/process/io/mfile_comparison.py
@@ -325,7 +325,6 @@ def main(arg):
 
         values = numpy.zeros(n)
 
-
         if v not in get_dicts()["DICT_VAR_TYPE"].keys():
             try:
                 eval(mfile_list[0].data[v].get_scan(-1))

From 1b19a022c04d9eafd6170db1ce3a0b3da236cf77 Mon Sep 17 00:00:00 2001
From: cjwgriesel <cjwgriesel@gmail.com>
Date: Fri, 5 Apr 2024 16:50:44 +0100
Subject: [PATCH 4/7] added corecctions for flake and black

---
 process/io/mfile_to_csv_vars.json | 42 +++++++++++++++----------------
 1 file changed, 21 insertions(+), 21 deletions(-)

diff --git a/process/io/mfile_to_csv_vars.json b/process/io/mfile_to_csv_vars.json
index 9e2a740e3f..77db494495 100644
--- a/process/io/mfile_to_csv_vars.json
+++ b/process/io/mfile_to_csv_vars.json
@@ -1,23 +1,23 @@
 {
-  "vars": [
-   "minmax",
-   "pinjalw",
-   "pnetelin",
-   "ripmax",
-   "tbrnmn",
-   "alstroh",
-   "sig_tf_wp_max",
-   "thwcndut",
-   "fcohbop",
-   "alstroh",
-   "rmajor",
-   "tfcth",
-   "ohcth",
-   "cpttf",
-   "dr_tf_wp",
-   "ddwex",
-   "shldoth",
-   "divfix",
-   "rmajor"
-  ]
+    "vars": [
+        "minmax",
+        "pinjalw",
+        "pnetelin",
+        "ripmax",
+        "tbrnmn",
+        "alstroh",
+        "sig_tf_wp_max",
+        "thwcndut",
+        "fcohbop",
+        "alstroh",
+        "rmajor",
+        "tfcth",
+        "ohcth",
+        "cpttf",
+        "dr_tf_wp",
+        "ddwex",
+        "shldoth",
+        "divfix",
+        "rmajor",
+    ]
 }

From 3250e50bc15702e18021dbd2bd9b19d18e43a902 Mon Sep 17 00:00:00 2001
From: cjwgriesel <cjwgriesel@gmail.com>
Date: Thu, 18 Apr 2024 16:59:59 +0100
Subject: [PATCH 5/7] made a mod

---
 process/io/mfile_comparison.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/process/io/mfile_comparison.py b/process/io/mfile_comparison.py
index 8656a7bae9..cd070ff77c 100755
--- a/process/io/mfile_comparison.py
+++ b/process/io/mfile_comparison.py
@@ -323,7 +323,7 @@ def main(arg):
         if "normres" in v:
             continue
 
-        values = numpy.zeros(n)
+        values = numpy.zeros(n) #  replaced scipy with numpy
 
         if v not in get_dicts()["DICT_VAR_TYPE"].keys():
             try:

From 031c055c63c10df7901f604e1e334e7450b29790 Mon Sep 17 00:00:00 2001
From: cjwgriesel <cjwgriesel@gmail.com>
Date: Thu, 18 Apr 2024 17:18:32 +0100
Subject: [PATCH 6/7] black and flake mods

---
 process/io/mfile_comparison.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/process/io/mfile_comparison.py b/process/io/mfile_comparison.py
index cd070ff77c..9386dba912 100755
--- a/process/io/mfile_comparison.py
+++ b/process/io/mfile_comparison.py
@@ -323,7 +323,7 @@ def main(arg):
         if "normres" in v:
             continue
 
-        values = numpy.zeros(n) #  replaced scipy with numpy
+        values = numpy.zeros(n)  # replaced scipy with numpy
 
         if v not in get_dicts()["DICT_VAR_TYPE"].keys():
             try:

From 6acdf85855dc41c4b638006514c070fe05f0191d Mon Sep 17 00:00:00 2001
From: Timothy Nunn <timothy.nunn@ukaea.uk>
Date: Fri, 19 Apr 2024 09:44:34 +0100
Subject: [PATCH 7/7] Remove trailing comma in mfile to csv json

---
 process/io/mfile_to_csv_vars.json | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/process/io/mfile_to_csv_vars.json b/process/io/mfile_to_csv_vars.json
index 77db494495..d102b4c82b 100644
--- a/process/io/mfile_to_csv_vars.json
+++ b/process/io/mfile_to_csv_vars.json
@@ -18,6 +18,6 @@
         "ddwex",
         "shldoth",
         "divfix",
-        "rmajor",
+        "rmajor"
     ]
-}
+}