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MMathisLab merged 6 commits into from
May 3, 2024
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test directory and very small data cube #75

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test directory and very small data cube
MMathisLab May 3, 2024
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Update README.md
MMathisLab May 3, 2024
49dd1b2
Update README.md
MMathisLab May 3, 2024
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Rename folder and edit README
C-Achard May 3, 2024
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Merge branch 'main' into mwm/test
C-Achard May 3, 2024
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Rename to "examples"
C-Achard May 3, 2024
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1 change: 1 addition & 0 deletions .gitignore
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Expand Up @@ -126,6 +126,7 @@ wandb/
!napari_cellseg3d/_tests/res/wnet_test/*.tif
!napari_cellseg3d/_tests/res/wnet_test/lab/*.tif
!napari_cellseg3d/_tests/res/wnet_test/vol/*.tif
!examples/*

#include docs images
!docs/source/logo/*
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7 changes: 7 additions & 0 deletions examples/README.md
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# Testing CellSeg3D on demo data

Here is a very small volume (from [IDR project 853](https://idr.openmicroscopy.org/webclient/?show=project-853)) to test on.
You can install, launch `napari`, activate the CellSeg3D plugin app, and drag & drop this volume into the canvas.
Then, for example, run `inference` with one of our models.

See [CellSeg3D documentation](https://adaptivemotorcontrollab.github.io/CellSeg3d/welcome.html) for more details.
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