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An issue about beastlabs.evolution.likelihood.AncestralStateLogger

Status: Open.

#26 In BEAST2-Dev/BEASTLabs;

· biozj-tz opened on Sep 13, 2025

WeightedDirichlet Jacobian term

enhancement

Status: Open.

#25 In BEAST2-Dev/BEASTLabs;

· walterxie opened on Jun 25, 2025

Add RandomComposition for Skyline group sizes prior

enhancement

Status: Open.

#23 In BEAST2-Dev/BEASTLabs;

· walterxie opened on May 29, 2025

Starting tree subtemplates merge with generic mergepoint

Status: Open.

#21 In BEAST2-Dev/BEASTLabs;

· bjoelle opened on Sep 5, 2023

ConstantSitesAlignment

enhancement

Status: Open.

#20 In BEAST2-Dev/BEASTLabs;

· walterxie opened on Dec 18, 2022

Deadlock when using Particle Filter

Status: Open.

#18 In BEAST2-Dev/BEASTLabs;

· dreyes17 opened on Mar 31, 2022

DocumentationTest fails for some classes

Status: Open.

#17 In BEAST2-Dev/BEASTLabs;

· kche309 opened on Feb 28, 2022

PrunedRelaxedClockModel is broken after meanRate is changed to Function

bug

Status: Open.

#15 In BEAST2-Dev/BEASTLabs;

· walterxie opened on Jul 29, 2021

SimpleRandomTree builds mixed clades under monophyly constraints

Status: Open.

#8 In BEAST2-Dev/BEASTLabs;

· Anaphory opened on May 7, 2019

Ancestral state reconstruction for multiple MRCAs with datatype-awareness

Status: Open.

#5 In BEAST2-Dev/BEASTLabs;

· Anaphory opened on Nov 15, 2017

Name clash

Status: Open.

#4 In BEAST2-Dev/BEASTLabs;

· gavryushkina opened on Sep 7, 2016

<code>PrunedAlignment</code> checks whether <code>taxonSet</code> is <code>null</code>, but it never is.

Status: Open.

#3 In BEAST2-Dev/BEASTLabs;

· Anaphory opened on Feb 1, 2016