Core Quantitative Genetic

code for single- and multi-trait genetic analysis (variance decomposition and GWAS) with DGE and IGE

in pysrc/

1. exp_bivar12_wMat.py to run variance decomposition analysis or null covariance matrix for LOCO GWAS
   needs classes/
   

   • SigmaRhoCov.py
   • dirIndirCov_v2.py
   • dirIndirVD_noMT_wMat.py
   • social_data_wMat.py

2. map_LOCO_noMT.py to run LOCO GWAS (in development)
   

in Rsrc/

1. estimate_to_rdata.R to parse etimates and STE files after variance decomposition with exp_bivar
   needs functions/prepare_res.R