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446 changes: 443 additions & 3 deletions book/HPC.md

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1,123 changes: 1,081 additions & 42 deletions book/performance.md

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53 changes: 51 additions & 2 deletions book/references.bib
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@@ -1,15 +1,64 @@
%% This BibTeX bibliography file was created using BibDesk.
%% https://bibdesk.sourceforge.io/

%% Created for Russell Poldrack at 2026-01-19 08:13:13 -0800
%% Created for Russell Poldrack at 2026-01-26 10:23:06 -0800


%% Saved with string encoding Unicode (UTF-8)



@inproceedings{Amdahl:1967aa,
abstract = {For over a decade prophets have voiced the contention that the organization of a single computer has reached its limits and that truly significant advances can be made only by interconnection of a multiplicity of computers in such a manner as to permit cooperative solution. Variously the proper direction has been pointed out as general purpose computers with a generalized interconnection of memories, or as specialized computers with geometrically related memory interconnections and controlled by one or more instruction streams.},
address = {New York, NY, USA},
author = {Amdahl, Gene M.},
booktitle = {Proceedings of the April 18-20, 1967, Spring Joint Computer Conference},
date-added = {2026-01-26 08:23:34 -0800},
date-modified = {2026-01-26 08:23:37 -0800},
doi = {10.1145/1465482.1465560},
isbn = {9781450378956},
location = {Atlantic City, New Jersey},
numpages = {3},
pages = {483--485},
publisher = {Association for Computing Machinery},
series = {AFIPS '67 (Spring)},
title = {Validity of the single processor approach to achieving large scale computing capabilities},
url = {https://doi.org/10.1145/1465482.1465560},
year = {1967},
bdsk-url-1 = {https://doi.org/10.1145/1465482.1465560}}

@article{Poldrack:1996aa,
abstract = {Methods for examining stochastic relationships have been proposed as powerful ways to dissociate different underlying psychological processes, but a number of problems have undermined conclusions based upon these methods. These testing methods and criticisms are reviewed, and the statistical methods for the testing of stochastic dependence are examined using computer simulation. With each of the methods examined, there were difficulties dealing with certain situations that are likely to occur in experiments examining dependence between successive tests. Examination also showed that the sample sizes of some previous studies were insufficient for findings of moderate amounts of dependence, calling some conclusions of stochastic independence into question. The results of the studies presented here suggest that testing for statistical dependence is a statistically perilous technique, but they also suggest several ways in which dedicated users of this form of testing can strengthen its application.},
author = {Poldrack, R A},
date-added = {2026-01-23 07:21:43 -0800},
date-modified = {2026-01-23 07:21:43 -0800},
doi = {10.3758/BF03214547},
journal = {Psychon Bull Rev},
journal-full = {Psychonomic bulletin \& review},
month = {Dec},
number = {4},
pages = {434-48},
pmid = {24213977},
pst = {ppublish},
title = {On testing for stochastic dissociations},
volume = {3},
year = {1996},
bdsk-url-1 = {https://doi.org/10.3758/BF03214547}}

@article{Moore:1965,
author = {Moore, G.E.},
date-added = {2026-01-22 06:35:20 -0800},
date-modified = {2026-01-22 06:52:32 -0800},
journal = {Electronics},
number = {8},
pages = {114},
title = {Cramming More Components Onto Integrated Circuits},
volume = {38},
year = {1965},
bdsk-url-1 = {https://doi.org/10.1109/JPROC.1998.658762}}

@inbook{Antonakis:2014aa,
address = {New York, NY, US},
address = {New York, NY, US},
author = {Antonakis, John and Bendahan, Samuel and Jacquart, Philippe and Lalive, Rafael},
booktitle = {The Oxford handbook of leadership and organizations.},
date-added = {2026-01-19 08:12:41 -0800},
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2 changes: 1 addition & 1 deletion book/sharing.md
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@@ -1,4 +1,4 @@
# Sharing Research Objects
# Sharing Research Objects (TBD)


## The FAIR principles for sharing
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6 changes: 3 additions & 3 deletions myst.yml
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Expand Up @@ -27,9 +27,9 @@ project:
- file: book/data_management.md
- file: book/workflows.md
- file: book/validation.md
# - file: performance
# - file: HPC
# - file: sharing
- file: book/performance.md
- file: book/HPC.md
- file: book/sharing.md

site:
options:
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