Add new tools based on Perl script collection #92
Description
Implement new Java tools specified by the short Perl (and Python) script collection from @WilliamKMLai.
- calculate_BED_ScoreRatio.pl
- deduplicate_BED_coord_keep_highest_score.py
- determine_closest_RefPoint_output_Both.pl
- filter_BED_by_list_ColumnSelect.pl
- filter_BED_by_string_ColumnSelect.pl
- filter_BED_by_value_ColumnSelect.pl
- shift_BED_center_v2.pl
- sort_BED_by_Score_v2.pl
- sum_Col_CDT.pl
- sum_Row_CDT.pl
- update_BED_coord.pl
- update_BED_score_with_TAB_score.pl