Skip to content

Add production workflow plugin#4

Merged
MartinHjelmare merged 76 commits into
masterfrom
add-production
Dec 8, 2019
Merged

Add production workflow plugin#4
MartinHjelmare merged 76 commits into
masterfrom
add-production

Conversation

@MartinHjelmare
Copy link
Copy Markdown
Collaborator

@MartinHjelmare MartinHjelmare commented Dec 6, 2019

Example configuration:

production:
  #sample_state_file: "/path/to/sample_state.csv"
  gain_pattern_name: p10xgain
  gain_job_id: 3
  gain_job_channels: 32
  exp_pattern_name: p10xexp
  exp_job_ids:
   - 3
   - 4
   - 6
  channels:
  - channel: green
    job_name: green10x
    detector_num: 1
    default_gain: 800
    max_gain: 800
  - channel: blue
    job_name: blue10x
    detector_num: 1
    default_gain: 505
    max_gain: 610
  - channel: yellow
    job_name: blue10x
    detector_num: 2
    default_gain: 655
    max_gain: 760
  - channel: red
    job_name: red10x
    detector_num: 2
    default_gain: 630
    max_gain: 735
  well_layout:
    x_fields: 2
    y_fields: 3
  #plot_save_path: "/path/to/gains/dir/00/"

gain:
  channels:
  - channel: green
    init_gain: [450, 495, 540, 585, 630, 675, 720, 765, 810, 855, 900]
  - channel: blue
    init_gain: [700, 735, 770, 805, 840, 875, 910]
  - channel: yellow
    init_gain: [700, 735, 770, 805, 840, 875, 910]
  - channel: red
    init_gain: [600, 635, 670, 705, 740, 775, 810]
  #save_dir: "/path/to/gains/dir"

rename_image:

leica:
  host: localhost
  #imaging_dir: '/path/to/imaging_dir'

@MartinHjelmare MartinHjelmare merged commit 03809f7 into master Dec 8, 2019
@MartinHjelmare MartinHjelmare deleted the add-production branch December 8, 2019 00:46
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant