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WIP: GOLD -> Canfar#264

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sfarrens wants to merge 168 commits intomasterfrom
canfar
Closed

WIP: GOLD -> Canfar#264
sfarrens wants to merge 168 commits intomasterfrom
canfar

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@sfarrens sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:34

Merge remaining modifs from GOLD (if any) to canfar.

Axel and others added 30 commits April 24, 2019 05:36
WIP : pipeline documentation
3bc044e 
How to run the pipeline, what each modules do, ..
Update link
0a15232
Fix syntax
9fe310a
Fix syntax
61ed685
Update pipeline doc
4453a41
Update doc
edd0598
Merge branch 'merge_headers_axel' into full_auto_Axel
ed77a6d
Merge branch 'merge_star_cat_Axel' into full_auto_Axel
5987bca
Update config
dbf1fd3
@martinkilbinger
Update pipeline_tutorial.md
02448d3
@martinkilbinger
Update pipeline_tutorial.md
94c543d
@martinkilbinger
Update pipeline_tutorial.md
cde2410
@martinkilbinger
Update pipeline_tutorial.md
4c44ba3
@martinkilbinger
Update pipeline_tutorial.md
a5b3067
@martinkilbinger
Update pipeline_tutorial.md
03db733
@martinkilbinger
Update pipeline_tutorial.md
ced8ab2
@martinkilbinger
MK pipeline tutorial editing
69c471f
@martinkilbinger
MK pipeline tutorial editing
dec9bd5
@martinkilbinger
MK pipeline tutorial editing
6dcaa25
@martinkilbinger
MK pipeline tutorial editing
ed4e270
@martinkilbinger
MK pipeline tutorial editing
d7fb766
Update config and module runners
425bffc
fix syntax
16037dd
Update create_star_cat.py
803830c 
Overcome the incompatibility issue regarding the handling of distortion effects in astropy.wcs
process
095af01
process
70aad8f
Auto stash before merge of "full_auto_Axel" and "origin/full_auto_Axel"
5c62e06
Merge branch 'merge_headers_axel' into full_auto_Axel
9c4df02
Some updates
abcd781
Add module input files
7b272ca
@martinkilbinger
cfis_download_images vcp msg adding
9c04ab9
@martinkilbinger
cfis_download_images: vcp as python command
dd4fd2d
@martinkilbinger
Fixed bug in vcp options
81cd32a
@martinkilbinger
install --vos option
4f5a222
@martinkilbinger
Merged GOLD -> canfar
e801f83
@martinkilbinger
python test successful
a4822b8
@martinkilbinger
Added canfar job files
a7fb3cb
@martinkilbinger
Apply suggestion to environment.yml
1e717d0
@martinkilbinger
Apply suggestion to shapepipe/pipeline/file_handler.py
fa12824
@martinkilbinger
Apply suggestion to shapepipe/pipeline/file_handler.py
1b45777
@martinkilbinger
Apply suggestion to shapepipe/pipeline/file_handler.py
e6e1f31
@martinkilbinger
job_SGE_MPI.sh running on cc, tile
d18f456
@martinkilbinger
Merge branch 'canfar' of drf-gitlab.cea.fr:cosmostat/ShapePipe into c…
dc51a9a 
…anfar
@martinkilbinger
Removed one of Martin's obsolete modules
1c89cee
@martinkilbinger
removed obsolete combine_mexp
69c4e51
@martinkilbinger
Removed Martin's obsolete tileobj_as_exp module
17c977a
@martinkilbinger
Removed obsolete tileobj_as_exp module from init
c5f0965
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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:37

star cats should not be combined for runs of only one or a few tiles.
This is done after several/many runs are finished.

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:39

Looks all fine.

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:39

closed

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:39

resolved all threads

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:40

reopened

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:40

OK.

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:47

added 1 commit

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:57

added 135 commits

  • 3bc044e - WIP : pipeline documentation
  • 0a15232 - Update link
  • 9fe310a - Fix syntax
  • 61ed685 - Fix syntax
  • 4453a41 - Update pipeline doc
  • edd0598 - Update doc
  • ed77a6d - Merge branch 'merge_headers_axel' into full_auto_Axel
  • 5987bca - Merge branch 'merge_star_cat_Axel' into full_auto_Axel
  • dbf1fd3 - Update config
  • 02448d3 - Update pipeline_tutorial.md
  • 94c543d - Update pipeline_tutorial.md
  • cde2410 - Update pipeline_tutorial.md
  • 4c44ba3 - Update pipeline_tutorial.md
  • a5b3067 - Update pipeline_tutorial.md
  • 03db733 - Update pipeline_tutorial.md
  • ced8ab2 - Update pipeline_tutorial.md
  • 69c471f - MK pipeline tutorial editing
  • dec9bd5 - MK pipeline tutorial editing
  • 6dcaa25 - MK pipeline tutorial editing
  • ed4e270 - MK pipeline tutorial editing
  • d7fb766 - MK pipeline tutorial editing
  • 425bffc - Update config and module runners
  • 16037dd - fix syntax
  • 803830c - Update create_star_cat.py
  • 095af01 - process
  • 70aad8f - process
  • 5c62e06 - Auto stash before merge of "full_auto_Axel" and "origin/full_auto_Axel"
  • 9c4df02 - Merge branch 'merge_headers_axel' into full_auto_Axel
  • abcd781 - Some updates
  • 7b272ca - Add module input files
  • 452fbfd - Merge remote-tracking branch 'origin/documentation_Axel' into documentation_Axel
  • ad052b2 - Bug fix
  • dd45416 - process
  • 1bc0582 - fix bug mpi
  • 8374db6 - fix bug mpi
  • 5730da3 - process
  • 8b716e1 - Merge remote-tracking branch 'origin/num_scheme_sf' into full_auto_Axel
  • f7f8c41 - Process
  • 0844255 - Update pipeline_tutorial.md
  • a761092 - Update README.rst
  • 2d955f4 - Update pipeline_tutorial.md
  • 6a5377f - Update pipeline_tutorial.md
  • 72a961d - Update pipeline_tutorial.md
  • 06e6166 - Update pipeline_tutorial.md
  • 1f56526 - Update pipeline_tutorial.md
  • 3496ccd - Update pipeline_tutorial.md
  • eaa53a4 - pulled .gitlab-ci.yml from master, since bCI failed
  • afeb5cd - pulled .gitlab-ci.yml from master, since bCI failed
  • 6a240d4 - Merge branch 'documentation_Axel' into GOLD
  • 0394520 - making cfis_field_select.py work (again)
  • cffdd8b - Updated setup.cfg from master; cfis_field_select.py
  • f2ff24e - Update pipeline_tutorial.md
  • 675a915 - Update pipeline_tutorial.md
  • dd6c252 - Update pipeline_tutorial.md
  • a63a19a - Update pipeline_tutorial.md
  • ce3ae50 - Update pipeline_tutorial.md
  • 5bd442f - GOLD split_exp example
  • 2c490e6 - Merge branch 'GOLD' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • 8b41d1d - Moved 2019-05 log file; cfis field selection scripts
  • cf3029d - ;Merge branch 'GOLD' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • 75d9457 - Update pipeline_tutorial.md
  • c0aa696 - Update pipeline_tutorial.md
  • 34d080d - Update pipeline_tutorial.md
  • fc2f157 - Update pipeline_tutorial.md
  • 46bc099 - Fixed minor issues and config entries for split, merge, mask
  • 635275a - Merge branch 'GOLD' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • 11a1fa5 - mask run + doc
  • cba92f1 - doc mask package
  • 616a9b6 - doc sections
  • deb71d2 - doc sections
  • 85dfa5c - Added GOLD sextractor config files
  • eff315e - GOLD ran setools, doc with plots
  • 4ad1a17 - doc plots
  • b0d34f8 - docs plot
  • 7de3fa3 - psfexinterp running
  • bde89f5 - Update ngmix
  • 6d30749 - Remove useless files
  • 6d48ffc - cfis_field_select: basenames on output
  • fb49af3 - cfis_field_select: name_only
  • baae105 - cfis_field_select work
  • 2a76d83 - cfis_field select return exp names ready for pipeline format
  • 7b7bd77 - Update pipeline_tutorial.md
  • faa8a46 - Update pipeline_tutorial.md
  • 6b8a650 - example GOLD, scripts
  • d88778e - Merge branch 'GOLD' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • 4a6531c - Added example/data for test run
  • b5a9585 - Update pipeline_tutorial.md
  • e463e12 - Update pipeline_tutorial.md
  • 741e26b - Update pipeline_tutorial.md
  • 1d8a799 - Update pipeline_tutorial.md
  • c5edbba - Update pipeline_tutorial.md
  • 0400a58 - Update pipeline_tutorial.md
  • c60bab4 - Update pipeline_tutorial.md
  • 0dc811e - Update pipeline_tutorial.md
  • e32d110 - added script to f-unzipp tile weights
  • 2ae9f66 - added config tile files
  • 1337636 - Merge branch 'GOLD' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • d63b56f - cfis_weight_format bug fix
  • c21930b - vignetmaker runner 1 + 2
  • 5c69c2e - Update pipeline_tutorial.md
  • 8431834 - Update pipeline_tutorial.md
  • 8cd43c0 - GOLD ngmix running; merge_star_cat.py updated
  • 0ee703b - Merge branch 'GOLD' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • 9d9f968 - Updating MeanShapes
  • f0ce91a - MeanShapes
  • 4902809 - ngmix timeout larger
  • efdbd5d - Merge branch 'full_auto_Axel' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • f661def - some config files: HOME -> SP_RUN, SP_CONFIG
  • 9f47eb9 - GOLD mask: no ext star cat
  • 2ee5f07 - Fixed bug in cfif_download_images with -o option
  • bf6dc12 - cfis_download_images: --vcp; ngmix updated to Axel's modif_obs branch
  • 1b2b83c - conflict solved
  • 96be080 - scripts: log command to stdout instead of stderr
  • a3a46a8 - Added config for sp_me_ma
  • c9e4ffc - config sp_me_ma
  • 6bdaf8c - Update pipeline_tutorial.md
  • 5705ad0 - Merge branch 'GOLD' of drf-gitlab.cea.fr:cosmostat/ShapePipe into GOLD
  • 7c76010 - fixed config sp_me_ma to run mask
  • 4e387c9 - more fixes of sp_me_ma
  • 8b07037 - Fixed paths in config.mask
  • 1291e20 - Update pipeline_tutorial.md
  • 01ba412 - Added sex to exp config
  • c029f74 - Merge branch 'GOLD' of https://drf-gitlab.cea.fr/cosmostat/ShapePipe into GOLD
  • 7752fb7 - Added sex to exp config
  • 2b04ea3 - config setools fix
  • 12ac006 - Fixed [SETOOLSRUNNER] section
  • 831b8f1 - Fixing sextractor section
  • 8b7cfe8 - Update pipeline_tutorial.md
  • 2c22e2a - MeanShapes: read HDU test ci setup #1 (canfar)
  • 1ede5ca - config_exp.ini created
  • f9e63b3 - Merge branch 'GOLD' of https://drf-gitlab.cea.fr/cosmostat/ShapePipe into GOLD
  • 9afa521 - MeanShapes: nx computed from ny for square pixels
  • a6e07ac - config_exp w/o merge stars at the end
  • bc598c9 - some changes adopted from master wo merge
  • e801f83 - Merged GOLD -> canfar

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 15:57

marked as a Work In Progress from 3bc044e

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sfarrens commented May 18, 2020

In GitLab by @martinkilbinger on Apr 29, 2020, 16:03

closed

@sfarrens sfarrens closed this May 18, 2020
@martinkilbinger martinkilbinger deleted the canfar branch May 19, 2020 12:06
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