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Requesting minimum set of config updates for big dataset #68

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Merged
sinamajidian merged 1 commit into from
Aug 19, 2025
Merged

Requesting minimum set of config updates for big dataset #68

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4 changes: 3 additions & 1 deletion FastOMA.nf
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Original file line number Diff line number Diff line change
Expand Up @@ -217,7 +217,7 @@ process omamer_run{


process infer_roothogs{
label "process_single"
label "process_medium"
publishDir = [
path: params.temp_output,
enabled: params.debug_enabled,
Expand Down Expand Up @@ -410,6 +410,7 @@ process hog_rest{


process collect_subhogs{
label "process_high"
publishDir params.output_folder, mode: 'copy'
input:
path pickles, stageAs: "pickle_folders/?"
Expand Down Expand Up @@ -455,6 +456,7 @@ process extract_pairwise_ortholog_relations {


process fastoma_report {
label "process_medium"
publishDir params.output_folder, mode: 'copy'
input:
path notebook
Expand Down