{2023.06}[foss/2022a] ImageMagick 7.1.0-37 by trz42 · Pull Request #361 · EESSI/software-layer

trz42 · 2023-10-10T19:48:27Z

PR with dual purpose:

Investigate failing builds of ImageMagick with foss/2022a
Test new build cluster eessi-bot-mc-aws

The PR will add the following packages:

34 out of 57 required modules missing:

* Bison/3.8.2-GCCcore-11.3.0 (Bison-3.8.2-GCCcore-11.3.0.eb)
* libpng/1.6.37-GCCcore-11.3.0 (libpng-1.6.37-GCCcore-11.3.0.eb)
* NASM/2.15.05-GCCcore-11.3.0 (NASM-2.15.05-GCCcore-11.3.0.eb)
* jbigkit/2.1-GCCcore-11.3.0 (jbigkit-2.1-GCCcore-11.3.0.eb)
* libiconv/1.17-GCCcore-11.3.0 (libiconv-1.17-GCCcore-11.3.0.eb)
* Doxygen/1.9.4-GCCcore-11.3.0 (Doxygen-1.9.4-GCCcore-11.3.0.eb)
* Brotli/1.0.9-GCCcore-11.3.0 (Brotli-1.0.9-GCCcore-11.3.0.eb)
* JasPer/2.0.33-GCCcore-11.3.0 (JasPer-2.0.33-GCCcore-11.3.0.eb)
* libjpeg-turbo/2.1.3-GCCcore-11.3.0 (libjpeg-turbo-2.1.3-GCCcore-11.3.0.eb)
* freetype/2.12.1-GCCcore-11.3.0 (freetype-2.12.1-GCCcore-11.3.0.eb)
* LittleCMS/2.13.1-GCCcore-11.3.0 (LittleCMS-2.13.1-GCCcore-11.3.0.eb)
* libdeflate/1.10-GCCcore-11.3.0 (libdeflate-1.10-GCCcore-11.3.0.eb)
* pixman/0.40.0-GCCcore-11.3.0 (pixman-0.40.0-GCCcore-11.3.0.eb)
* gzip/1.12-GCCcore-11.3.0 (gzip-1.12-GCCcore-11.3.0.eb)
* PCRE/8.45-GCCcore-11.3.0 (PCRE-8.45-GCCcore-11.3.0.eb)
* lz4/1.9.3-GCCcore-11.3.0 (lz4-1.9.3-GCCcore-11.3.0.eb)
* zstd/1.5.2-GCCcore-11.3.0 (zstd-1.5.2-GCCcore-11.3.0.eb)
* LibTIFF/4.3.0-GCCcore-11.3.0 (LibTIFF-4.3.0-GCCcore-11.3.0.eb)
* fontconfig/2.14.0-GCCcore-11.3.0 (fontconfig-2.14.0-GCCcore-11.3.0.eb)
* FriBidi/1.0.12-GCCcore-11.3.0 (FriBidi-1.0.12-GCCcore-11.3.0.eb)
* ICU/71.1-GCCcore-11.3.0 (ICU-71.1-GCCcore-11.3.0.eb)
* Ninja/1.10.2-GCCcore-11.3.0 (Ninja-1.10.2-GCCcore-11.3.0.eb)
* Meson/0.62.1-GCCcore-11.3.0 (Meson-0.62.1-GCCcore-11.3.0.eb)
* GLib/2.72.1-GCCcore-11.3.0 (GLib-2.72.1-GCCcore-11.3.0.eb)
* X11/20220504-GCCcore-11.3.0 (X11-20220504-GCCcore-11.3.0.eb)
* cairo/1.17.4-GCCcore-11.3.0 (cairo-1.17.4-GCCcore-11.3.0.eb)
* GObject-Introspection/1.72.0-GCCcore-11.3.0 (GObject-Introspection-1.72.0-GCCcore-11.3.0.eb)
* HarfBuzz/4.2.1-GCCcore-11.3.0 (HarfBuzz-4.2.1-GCCcore-11.3.0.eb)
* ATK/2.38.0-GCCcore-11.3.0 (ATK-2.38.0-GCCcore-11.3.0.eb)
* Gdk-Pixbuf/2.42.8-GCCcore-11.3.0 (Gdk-Pixbuf-2.42.8-GCCcore-11.3.0.eb)
* Pango/1.50.7-GCCcore-11.3.0 (Pango-1.50.7-GCCcore-11.3.0.eb)
* GTK2/2.24.33-GCCcore-11.3.0 (GTK2-2.24.33-GCCcore-11.3.0.eb)
* Ghostscript/9.56.1-GCCcore-11.3.0 (Ghostscript-9.56.1-GCCcore-11.3.0.eb)
* ImageMagick/7.1.0-37-GCCcore-11.3.0 (ImageMagick-7.1.0-37-GCCcore-11.3.0.eb)

eessi-bot · 2023-10-10T19:48:31Z

Instance eessi-bot-mc-aws is configured to build:

arch x86_64/generic for repo eessi-hpc.org-2023.06-compat
arch x86_64/generic for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-software
arch aarch64/generic for repo eessi-hpc.org-2023.06-compat
arch aarch64/generic for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-software

eessi-bot · 2023-10-10T19:48:31Z

Instance eessi-bot-citc-aws is configured to build:

arch x86_64/generic for repo eessi-2021.12
arch x86_64/generic for repo eessi.org-2023.06-compat
arch x86_64/generic for repo eessi.io-2023.06-compat
arch x86_64/generic for repo eessi-2023.06-software
arch x86_64/intel/haswell for repo eessi-2021.12
arch x86_64/intel/haswell for repo eessi.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi.io-2023.06-compat
arch x86_64/intel/haswell for repo eessi-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-2021.12
arch x86_64/intel/skylake_avx512 for repo eessi.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi.io-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-2023.06-software
arch x86_64/amd/zen2 for repo eessi-2021.12
arch x86_64/amd/zen2 for repo eessi.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi.io-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-2023.06-software
arch x86_64/amd/zen3 for repo eessi-2021.12
arch x86_64/amd/zen3 for repo eessi.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi.io-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-2023.06-software
arch aarch64/generic for repo eessi-2021.12
arch aarch64/generic for repo eessi.org-2023.06-compat
arch aarch64/generic for repo eessi.io-2023.06-compat
arch aarch64/generic for repo eessi-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-2021.12
arch aarch64/neoverse_n1 for repo eessi.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi.io-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-2021.12
arch aarch64/neoverse_v1 for repo eessi.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi.io-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-2023.06-software

trz42 · 2023-10-10T19:50:02Z

bot: instance:eessi-bot-mc-aws repo:eessi-hpc.org-2023.06-software arch:zen2

eessi-bot · 2023-10-10T19:50:05Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command instance:eessi-bot-mc-aws repo:eessi-hpc.org-2023.06-software arch:zen2 from trz42
- expanded format: instance:eessi-bot-mc-aws repository:eessi-hpc.org-2023.06-software architecture:zen2
handling command instance:eessi-bot-mc-aws failed with message
unknown command instance:eessi-bot-mc-aws; use bot: help for usage information

eessi-bot · 2023-10-10T19:50:05Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command instance:eessi-bot-mc-aws repo:eessi-hpc.org-2023.06-software arch:zen2 from trz42
- expanded format: instance:eessi-bot-mc-aws repository:eessi-hpc.org-2023.06-software architecture:zen2
handling command instance:eessi-bot-mc-aws failed with message
unknown command instance:eessi-bot-mc-aws; use bot: help for usage information

trz42 · 2023-10-10T19:52:53Z

bot: build instance:eessi-bot-mc-aws repo:eessi-hpc.org-2023.06-software arch:zen2

eessi-bot · 2023-10-10T19:52:55Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build instance:eessi-bot-mc-aws repo:eessi-hpc.org-2023.06-software arch:zen2 from trz42
- expanded format: build instance:eessi-bot-mc-aws repository:eessi-hpc.org-2023.06-software architecture:zen2
handling command build instance:eessi-bot-mc-aws repository:eessi-hpc.org-2023.06-software architecture:zen2 resulted in:
- submitted job 25, for details & status see {2023.06}[foss/2022a] ImageMagick 7.1.0-37 #361 (comment)

eessi-bot · 2023-10-10T19:52:56Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build instance:eessi-bot-mc-aws repo:eessi-hpc.org-2023.06-software arch:zen2 from trz42
- expanded format: build instance:eessi-bot-mc-aws repository:eessi-hpc.org-2023.06-software architecture:zen2
handling command build instance:eessi-bot-mc-aws repository:eessi-hpc.org-2023.06-software architecture:zen2 resulted in:
- no jobs were submitted

eessi-bot · 2023-10-10T19:53:00Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi-hpc.org-2023.06-software in job dir /project/def-users/SHARED/jobs/2023.10/pr_361/25

date	job status	comment
Oct 10 19:52:59 UTC 2023	submitted	job id `25` awaits release by job manager
Oct 10 19:53:09 UTC 2023	released	job awaits launch by Slurm scheduler
Oct 10 19:58:11 UTC 2023	running	job `25` is running
Oct 10 21:14:08 UTC 2023	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-25.out` ❌ found message matching `ERROR:` ❌ found message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1696972243.tar.gz` size: 126 MiB (132888111 bytes) entries: 13251 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `ATK/2.38.0-GCCcore-11.3.0.lua` `Bison/3.8.2-GCCcore-11.3.0.lua` `Brotli/1.0.9-GCCcore-11.3.0.lua` `cairo/1.17.4-GCCcore-11.3.0.lua` `Doxygen/1.9.4-GCCcore-11.3.0.lua` `fontconfig/2.14.0-GCCcore-11.3.0.lua` `freetype/2.12.1-GCCcore-11.3.0.lua` `FriBidi/1.0.12-GCCcore-11.3.0.lua` `Gdk-Pixbuf/2.42.8-GCCcore-11.3.0.lua` `Ghostscript/9.56.1-GCCcore-11.3.0.lua` `GLib/2.72.1-GCCcore-11.3.0.lua` `GObject-Introspection/1.72.0-GCCcore-11.3.0.lua` `GTK2/2.24.33-GCCcore-11.3.0.lua` `gzip/1.12-GCCcore-11.3.0.lua` `HarfBuzz/4.2.1-GCCcore-11.3.0.lua` `ICU/71.1-GCCcore-11.3.0.lua` `JasPer/2.0.33-GCCcore-11.3.0.lua` `jbigkit/2.1-GCCcore-11.3.0.lua` `libdeflate/1.10-GCCcore-11.3.0.lua` `libiconv/1.17-GCCcore-11.3.0.lua` `libjpeg-turbo/2.1.3-GCCcore-11.3.0.lua` `libpng/1.6.37-GCCcore-11.3.0.lua` `LibTIFF/4.3.0-GCCcore-11.3.0.lua` `LittleCMS/2.13.1-GCCcore-11.3.0.lua` `lz4/1.9.3-GCCcore-11.3.0.lua` `Meson/0.62.1-GCCcore-11.3.0.lua` `NASM/2.15.05-GCCcore-11.3.0.lua` `Ninja/1.10.2-GCCcore-11.3.0.lua` `Pango/1.50.7-GCCcore-11.3.0.lua` `PCRE/8.45-GCCcore-11.3.0.lua` `pixman/0.40.0-GCCcore-11.3.0.lua` `X11/20220504-GCCcore-11.3.0.lua` `zstd/1.5.2-GCCcore-11.3.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `ATK/2.38.0-GCCcore-11.3.0` `Bison/3.8.2-GCCcore-11.3.0` `Brotli/1.0.9-GCCcore-11.3.0` `cairo/1.17.4-GCCcore-11.3.0` `Doxygen/1.9.4-GCCcore-11.3.0` `fontconfig/2.14.0-GCCcore-11.3.0` `freetype/2.12.1-GCCcore-11.3.0` `FriBidi/1.0.12-GCCcore-11.3.0` `Gdk-Pixbuf/2.42.8-GCCcore-11.3.0` `Ghostscript/9.56.1-GCCcore-11.3.0` `GLib/2.72.1-GCCcore-11.3.0` `GObject-Introspection/1.72.0-GCCcore-11.3.0` `GTK2/2.24.33-GCCcore-11.3.0` `gzip/1.12-GCCcore-11.3.0` `HarfBuzz/4.2.1-GCCcore-11.3.0` `ICU/71.1-GCCcore-11.3.0` `JasPer/2.0.33-GCCcore-11.3.0` `jbigkit/2.1-GCCcore-11.3.0` `libdeflate/1.10-GCCcore-11.3.0` `libiconv/1.17-GCCcore-11.3.0` `libjpeg-turbo/2.1.3-GCCcore-11.3.0` `libpng/1.6.37-GCCcore-11.3.0` `LibTIFF/4.3.0-GCCcore-11.3.0` `LittleCMS/2.13.1-GCCcore-11.3.0` `lz4/1.9.3-GCCcore-11.3.0` `Meson/0.62.1-GCCcore-11.3.0` `NASM/2.15.05-GCCcore-11.3.0` `Ninja/1.10.2-GCCcore-11.3.0` `Pango/1.50.7-GCCcore-11.3.0` `PCRE/8.45-GCCcore-11.3.0` `pixman/0.40.0-GCCcore-11.3.0` `X11/20220504-GCCcore-11.3.0` `zstd/1.5.2-GCCcore-11.3.0` other under 2023.06/software/linux/x86_64/amd/zen2 `.lmod/cache/spiderT.lua` `.lmod/cache/spiderT.luac_5.1` `.lmod/cache/timestamp`

boegel · 2023-10-11T10:54:30Z

@trz42 Just FYI: there's significant overlap here (like X11) with #331, which will hopefully be finished/deployed really soon now.

It's probably worth opening a dedicated PR for X11 for other toolchains, since it's a common dep.

Good to see that new bot instance seems ready to go!

boegel · 2023-10-11T11:07:33Z

bot: build instance:eessi-bot-mc-aws repo:eessi-2023.06-software arch:zen2

edit: this was just a test, neither of the bots should take action, since eessi-bot-mc-aws is not configured with a repo named eessi-2023.06-software

eessi-bot · 2023-10-11T11:07:36Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build instance:eessi-bot-mc-aws repo:eessi-2023.06-software arch:zen2 from boegel
- expanded format: build instance:eessi-bot-mc-aws repository:eessi-2023.06-software architecture:zen2
handling command build instance:eessi-bot-mc-aws repository:eessi-2023.06-software architecture:zen2 resulted in:
- no jobs were submitted

eessi-bot · 2023-10-11T11:07:36Z

Updates by the bot instance eessi-bot-citc-aws (click for details)

received bot command build instance:eessi-bot-mc-aws repo:eessi-2023.06-software arch:zen2 from boegel
- expanded format: build instance:eessi-bot-mc-aws repository:eessi-2023.06-software architecture:zen2
handling command build instance:eessi-bot-mc-aws repository:eessi-2023.06-software architecture:zen2 resulted in:
- no jobs were submitted

boegel · 2023-10-11T19:37:59Z

bot: show_config

eessi-bot · 2023-10-11T19:38:01Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command show_config from boegel
- expanded format: show_config
handling command show_config resulted in:
- added comment {2023.06}[foss/2022a] ImageMagick 7.1.0-37 #361 (comment) to show configuration

eessi-bot · 2023-10-11T19:38:04Z

Instance eessi-bot-mc-aws is configured to build:

arch x86_64/generic for repo eessi-hpc.org-2023.06-compat
arch x86_64/generic for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/haswell for repo eessi-hpc.org-2023.06-software
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-compat
arch x86_64/intel/skylake_avx512 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen2 for repo eessi-hpc.org-2023.06-software
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-compat
arch x86_64/amd/zen3 for repo eessi-hpc.org-2023.06-software
arch aarch64/generic for repo eessi-hpc.org-2023.06-compat
arch aarch64/generic for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_n1 for repo eessi-hpc.org-2023.06-software
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-compat
arch aarch64/neoverse_v1 for repo eessi-hpc.org-2023.06-software

bedroge · 2024-03-12T16:07:59Z

@trz42 I guess we can close this PR?

trz42 · 2024-03-12T19:14:19Z

@trz42 I guess we can close this PR?

Can probably be closed although it still fails for NESSI. See NorESSI#286

trz42 · 2024-03-26T21:34:55Z

ImageMagick has been ingested into the production repository in the meanwhile.

…2-dependency add psm2 to filter-deps and rebuild GROMACS

{2023.06}[foss/2022a] ImageMagic 7.1.0-37

987f149

trz42 added the pilot-2023.06 label Oct 10, 2023

trz42 changed the title ~~{2023.06}[foss/2022a] ImageMagic 7.1.0-37~~ {2023.06}[foss/2022a] ImageMagick 7.1.0-37 Oct 10, 2023

boegel changed the base branch from 2023.06 to pilot.eessi-hpc.org-2023.06 November 21, 2023 21:19

trz42 closed this Mar 26, 2024

trz42 pushed a commit to TopRichard/software-layer that referenced this pull request May 16, 2024

Merge pull request EESSI#361 from trz42/nessi-2023.06-fix-missing-psm…

bbbea34

…2-dependency add psm2 to filter-deps and rebuild GROMACS

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