Welcome to Examind Tutorials 🌍

This repository contains a list of tutorials on various Examind features.

If you have any questions, or if you want the latest docker image of Examind Community, please contact :

• ✉️ quentin.bialota@geomatys.com
• ✉️ dorian.ginane@geomatys.com
• ✉️ pascal.broglie@geomatys.com

---

📑 List of tutorials

🛰️ OpenEO

• 📙 OpenEO Jupyter Notebooks :
  • Notebook with Http requests
  • Notebook with the OpenEO web editor
  • Notebook with the python client
  • Notebook using external STAC and a custom process
• 📋 Import data -> How to import my data in examind ?
• 📂 Resources -> Resources for OpenEO

⚙️ Run external process via CWL

(Expose external processes through WPS, Processes, OpenEO using Common Workflow Language)

• 📋 Pre-configuration of Examind if you use Podman Rootless -> Podman Rootless Conf
• 📋 Configuration of Examind (any cases) -> Examind Conf
• 📙 Tutorial with dockerized NDVI process (Jupyter Notebook) -> Dockerized NDVI process tutorial with CWL
• 📙 Tutorial for STAC data downloader (Juypyter Notebook) -> Dockerized External Stac tutorial with CWL
• 📂 Resources -> Resources for External Processes with CWL

🌌 Galaxy Workflows through WPS

• 📙 Example (Jupyter Notebook) -> Jupyter notebook with some WPS requests for Galaxy workflows
• 📄 Tutorial (PDF) -> Deploy and use Galaxy Workflows with Examind WPS
• 📂 Resources -> Resources for Galaxy Workflows through WPS

⏱️ Time Data Aggregation

• 📙 Example (Jupyter Notebook) -> Jupyter notebook with NDVI Aggregation - How to import and request data ?
• 📄 Tutorial (PDF) -> Importing geotiff time series data into Examind Community
• 📼 Video (Italy Soil data aggregation through S3) -> Access link
• 📂 Resources -> Resources for Time Data Aggregation

🗺️ Setup WMS, and visualisation in Terriamap

• 📋 Import data -> How to import my data in examind ?
• 📋 Style data -> How to set a style to my data in examind ?
• 📋 WMS setup -> WMS setup example
• 📋 Terriamap configuration for Examind WMS -> Terriamap configuration example
• 🐱 Terriamap setup example -> FairEase Terriamap

---

🚀 Deployment of Examind Community

You also have in this repository :

• A 🐋 docker-compose file (for examind-community) (you need to import the docker image before)
• A 📜 run.sh script (to run examind)
• A 📜 stop.sh script (to stop examind)

---

📙 Generate Jupyter-Book documentation

To generate the documentation using Jupyter-Book, you need to have Jupyter-Book installed. If you don't have it yet, you can install it using pip:

pip install -U jupyter-book

Once you have Jupyter-Book installed, navigate to the root directory of the repository and run the following command:

jupyter-book build --html

This command will generate the documentation in the _build/html directory. You can open the index.html file in that directory with your web browser to view the generated documentation.

NOTE : If you only want to have the documentation "one time" using this repo you can run :

jupyter-book start

🖥️ Open the generated documentation

To open the generated documentation, you need to run a web server with the _build/html directory as the root. You can use Python's built-in HTTP server for this purpose.

Navigate to the _build/html directory:

cd _build/html

Then, start the HTTP server using Python:

python -m http.server 8000

This command will start a web server on port 8000. You can access the documentation by opening your web browser and navigating to http://localhost:8000.