Image Processing Tools
======================
vmtk, ITK

Build Docker
=======================
docker build -t vesseltools .

Debug
=====
docker run --entrypoint=/bin/bash --rm -it -u $(id -u):$(id -g) vesseltools 


Usage
=====
docker run --entrypoint=/opt/itk/DicomSeriesReadImageWrite2  --rm -it --user $(id -u):$(id -g) -v $PWD/dicomdir/:/data/  -v $PWD:/out iptools:latest /data/ /out/image.nii.gz
docker run --entrypoint=/opt/mitk/ImageDenoising/TotalVariationDenoisingImage  --rm -it --user $(id -u):$(id -g) -v $PWD/:/data/  -v $PWD:/out iptools:latest /data/art.nii.gz /out/art.denoise.nii.gz


dockerhub
=========

docker login --username=fuentesdt

docker tag f3dca8cda305 fuentesdt/iptools:latest

docker push fuentesdt/iptools