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Implement a two-pulse voltage clamp analysis to measure steady-state inactivation (h∞) as a function of conditioning prepulse voltage, and overlay a Boltzmann fit.
Motivation
The activation G-V curve (#177) shows how channels open with depolarisation. The steady-state inactivation (h∞) curve shows how channels are inactivated at rest at different voltages. Together they are the canonical pair for characterising voltage-gated channels, and their voltage overlap defines the window current — a clinically important feature in cardiac and neuronal channelopathies.
Proposed behaviour
The user runs a voltage clamp Step protocol with multiple sweeps, each using a different conditioning prepulse voltage followed by a fixed test pulse.
From the peak current at the test pulse in each sweep, compute normalised availability: h∞(V) = I_peak(V) / I_peak_max.
Fit a Boltzmann curve: h∞(V) = 1 / (1 + exp((V − V_half) / k)) and report V_half and slope factor k.
Plot h∞ vs. prepulse voltage, overlaid with the fit curve.
Implementation notes
Distinct from the standard step protocol — the two-pulse structure may need a new voltage clamp protocol type, or could be approximated with the existing Step protocol if the conditioning pulse is treated as part of the step sequence.
Overview
Implement a two-pulse voltage clamp analysis to measure steady-state inactivation (h∞) as a function of conditioning prepulse voltage, and overlay a Boltzmann fit.
Motivation
The activation G-V curve (#177) shows how channels open with depolarisation. The steady-state inactivation (h∞) curve shows how channels are inactivated at rest at different voltages. Together they are the canonical pair for characterising voltage-gated channels, and their voltage overlap defines the window current — a clinically important feature in cardiac and neuronal channelopathies.
Proposed behaviour
h∞(V) = 1 / (1 + exp((V − V_half) / k))and report V_half and slope factor k.Implementation notes