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Add Pubmed/Medline Query Transformer#8818

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Siedlerchr merged 3 commits intomainfrom
medlineQueryTransformer
May 21, 2022
Merged

Add Pubmed/Medline Query Transformer#8818
Siedlerchr merged 3 commits intomainfrom
medlineQueryTransformer

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@Siedlerchr Siedlerchr commented May 17, 2022

Supports the default search fields and boolean operators

The MedlineQueryTransformer is a SuffixTransformer; therefore, I added a new test class. However, I then noticed that the default test cases only over quoted strings whereas Medline uses unquoted strings, so I did not add a test case.
Test class is still useful for future suffix transformers

Fixes https://discourse.jabref.org/t/native-pubmed-search/3354

  • Change in CHANGELOG.md described in a way that is understandable for the average user (if applicable)
  • Tests created for changes (if applicable)
  • Manually tested changed features in running JabRef (always required)
  • Screenshots added in PR description (for UI changes)
  • Checked developer's documentation: Is the information available and up to date? If not, I outlined it in this pull request.
  • Checked documentation: Is the information available and up to date? If not, I created an issue at https://github.com/JabRef/user-documentation/issues or, even better, I submitted a pull request to the documentation repository.

Supports the default search fields and boolean operators

Fixes https://discourse.jabref.org/t/native-pubmed-search/3354
@Siedlerchr Siedlerchr added the status: ready-for-review Pull Requests that are ready to be reviewed by the maintainers label May 17, 2022
@Siedlerchr Siedlerchr merged commit 74f33d6 into main May 21, 2022
@Siedlerchr Siedlerchr deleted the medlineQueryTransformer branch May 21, 2022 16:28
Siedlerchr added a commit to claell/jabref that referenced this pull request May 21, 2022
…lick

* upstream/main:
  Add Pubmed/Medline Query Transformer (JabRef#8818)
  adjust and add testcases for FileAnnotationViewModel (JabRef#8830)
  Append config instead of replacing (JabRef#8834)
  Fix eclipse config (JabRef#8835)
  Add Nemo file manager (JabRef#8831)
  Fix missing clear action on pressing esc within the "Filter groups" field (JabRef#8829)
  Update bouncycalse to new base version (JabRef#8827)
  add: add test cases for FileUtil (JabRef#8810)
  Restrict use of standard streams (JabRef#8816)
  updated 8802 (JabRef#8817)
Siedlerchr added a commit to Christina0114/jabref that referenced this pull request May 22, 2022
* upstream/main: (109 commits)
  Fix right clicking a group and choosing "remove selected entries from this group" leads to error when Bibtex source tab is selected (JabRef#8821)
  Fix single identifier cannot be opened on click (JabRef#8838)
  Add Pubmed/Medline Query Transformer (JabRef#8818)
  adjust and add testcases for FileAnnotationViewModel (JabRef#8830)
  Append config instead of replacing (JabRef#8834)
  Fix eclipse config (JabRef#8835)
  Add Nemo file manager (JabRef#8831)
  Fix missing clear action on pressing esc within the "Filter groups" field (JabRef#8829)
  Update bouncycalse to new base version (JabRef#8827)
  add: add test cases for FileUtil (JabRef#8810)
  Restrict use of standard streams (JabRef#8816)
  updated 8802 (JabRef#8817)
  Bump pascalgn/automerge-action from 0.15.2 to 0.15.3 (JabRef#8803)
  Bump jackson-dataformat-yaml from 2.13.2 to 2.13.3 (JabRef#8804)
  Bump icu4j-charset from 70.1 to 71.1 (JabRef#8805)
  Fix notifications that overlap task bar (JabRef#8775)
  checkstye
  Default path for ssl key store is nested inside "JabRef" directory (JabRef#8796)
  Add log on disk (JabRef#8791)
  Fix for JabRef#8788 JabRef not showing contents of shared database library (JabRef#8793)
  ...
Siedlerchr added a commit to josepylee/jabref that referenced this pull request May 22, 2022
* upstream/main:
  Fix right clicking a group and choosing "remove selected entries from this group" leads to error when Bibtex source tab is selected (JabRef#8821)
  Fix single identifier cannot be opened on click (JabRef#8838)
  Add Pubmed/Medline Query Transformer (JabRef#8818)
  adjust and add testcases for FileAnnotationViewModel (JabRef#8830)
  Append config instead of replacing (JabRef#8834)
  Fix eclipse config (JabRef#8835)
  Add Nemo file manager (JabRef#8831)
  Fix missing clear action on pressing esc within the "Filter groups" field (JabRef#8829)
Siedlerchr added a commit to fly-ing-fish/jabref that referenced this pull request May 22, 2022
…-masked-characters#8787

* upstream/main:
  Add: Add test cases for non-default styles in CitationStyleTest (JabRef#8828)
  Open event log when clicking on collapsed notification (JabRef#8837)
  Fix right clicking a group and choosing "remove selected entries from this group" leads to error when Bibtex source tab is selected (JabRef#8821)
  Fix single identifier cannot be opened on click (JabRef#8838)
  Add Pubmed/Medline Query Transformer (JabRef#8818)
  adjust and add testcases for FileAnnotationViewModel (JabRef#8830)
  Append config instead of replacing (JabRef#8834)
  Fix eclipse config (JabRef#8835)
  Add Nemo file manager (JabRef#8831)
  Fix missing clear action on pressing esc within the "Filter groups" field (JabRef#8829)
  Update bouncycalse to new base version (JabRef#8827)
  add: add test cases for FileUtil (JabRef#8810)
  Restrict use of standard streams (JabRef#8816)
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3 participants