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Make Leica microscope data directory finding more robust

Status: Open.

#19 In KnottLab/codex;

· nathanin opened on Aug 15, 2021

Tracking: Documentation

Status: Open.

#13 In KnottLab/codex;

· nathanin opened on Mar 20, 2021

Docker/Singularity

Status: Open.

#12 In KnottLab/codex;

· nathanin opened on Mar 15, 2021

Reading metadata "Position X" instead of "Region X"

leica

Status: Open.

#11 In KnottLab/codex;

· nathanin opened on Mar 15, 2021

Intensity correction

Status: Open.

#10 In KnottLab/codex;

· nathanin opened on Mar 14, 2021

Tracking: input/output

Status: Open.

#9 In KnottLab/codex;

· nathanin opened on Mar 4, 2021

Step by step QC built into the preprocessing pipeline

Status: Open.

#5 In KnottLab/codex;

· nathanin opened on Feb 3, 2021

Change preprocessing functions to process tiles in parallel

enhancementNew feature or requestNew feature or request

preprocessingrelated to preprocessing of raw datarelated to preprocessing of raw data

pythonrelated to the python-based processing workflowrelated to the python-based processing workflow

Status: Open.

#4 In KnottLab/codex;

· nathanin opened on Jan 29, 2021