Inquiry about Installing Package "phateR" in R

[Tiffanyytz]

Hello all,

I'm encountering difficulties installing and using the "phateR" package in both R and Python environments.

1. In R: After attempting to use the package, I encountered the following error: Error: ModuleNotFoundError: No module named 'phate'.

2. In Python: While trying to install the package 'phate', I received the following error messages:
   ModuleNotFoundError: No module named 's_gd2.swig._layout'
   ImportError: dlopen(/Users/yaz089/.local/lib/python3.11/site-packages/_layout.cpython-311-darwin.so, 0x0002): tried: '/Users/yaz089/.local/lib/python3.11/site-packages/_layout.cpython-311-darwin.so' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64')), '/System/Volumes/Preboot/Cryptexes/OS/Users/yaz089/.local/lib/python3.11/site-packages/_layout.cpython-311-darwin.so' (no such file), '/Users/yaz089/.local/lib/python3.11/site-packages/_layout.cpython-311-darwin.so' (mach-o file, but is an incompatible architecture (have 'x86_64', need 'arm64')).

Would appreciate any suggestions or help! Thanks!

[pengpengyang94]

pip install s_gd2==1.7

[janxkoci]

Or

conda install conda-forge::r-phater bioconda::phate

😉