fix: Update examples to match the data

[Siel]

No description provided.

[github-actions]

Bencher Report

Branch	fix/examples
Testbed	mhovd-pgx

Click to view all benchmark results

Benchmark	Latency	Benchmark Result milliseconds (ms) (Result Δ%)	Upper Boundary milliseconds (ms) (Limit %)
bimodal_ke_npag	📈 view plot 🚷 view threshold	4,815.00 ms (-2.54%) Baseline: 4,940.55 ms	5,168.07 ms (93.17%)
bimodal_ke_npod	📈 view plot 🚷 view threshold	1,453.20 ms (+3.35%) Baseline: 1,406.10 ms	3,865.83 ms (37.59%)
bimodal_ke_postprob	📈 view plot 🚷 view threshold	280.12 ms (-34.53%) Baseline: 427.85 ms	1,862.47 ms (15.04%)

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[Copilot]

Pull request overview

Updates example models so their compartment/input/output indexing matches the associated Pmetrics CSV data conventions (notably INPUT/OUTEQ values starting at 1 in these datasets).

Changes:

• Align dosing/input indexing by switching b[...] / rateiv[...] references from 0 to 1 where INPUT=1 in the CSVs.
• Align output equation indexing by switching y[...] assignments to match OUTEQ values in the CSVs (e.g., 1..3).
• Update assay error model registrations to use the same OUTEQ indices as the datasets.

Reviewed changes

Copilot reviewed 3 out of 3 changed files in this pull request and generated no comments.

File	Description
examples/two_eq_lag/main.rs	Shift dose/lag/output/error-model indices to match INPUT=1 and OUTEQ=1 in two_eq_lag.csv.
examples/neely/main.rs	Update infusion/dose input index and map outputs + error models to OUTEQ=1..3 in data.csv.
examples/meta/main.rs	Update infusion/dose input index and map outputs + error models to OUTEQ=1..2 in meta.csv.

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