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Migrate .view.xml files from <permissions> to <permissionClasses> #207

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Merged
labkey-adam merged 1 commit into from
Jul 13, 2024
Merged

Migrate .view.xml files from <permissions> to <permissionClasses> #207

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8 changes: 4 additions & 4 deletions LabPurchasing/resources/views/manageReferenceItems.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Manage Reference Item">
<permissions>
<permission name="update"/>
<permission name="delete"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.UpdatePermission"/>
<permissionClass name="org.labkey.api.security.permissions.DeletePermission"/>
</permissionClasses>
<dependencies>
<dependency path="laboratory.context" />
</dependencies>
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6 changes: 3 additions & 3 deletions LabPurchasing/resources/views/order.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Order New Item(s)">
<permissions>
<permission name="insert"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.InsertPermission"/>
</permissionClasses>
<dependencies>
<dependency path="laboratory.context" />
<dependency path="labpurchasing/window/ReorderPreviousWindow.js"/>
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8 changes: 4 additions & 4 deletions LabPurchasing/resources/views/placeOrders.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Order Item(s)">
<permissions>
<permission name="insert"/>
<permission name="update"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.InsertPermission"/>
<permissionClass name="org.labkey.api.security.permissions.UpdatePermission"/>
</permissionClasses>
<dependencies>
<dependency path="laboratory.context" />
<dependency path="labpurchasing/window/ReorderPreviousWindow.js"/>
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6 changes: 3 additions & 3 deletions LabPurchasing/resources/views/populateData.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Populate Purchasing Lookups and Reference Data">
<permissions>
<permission name="admin"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
</permissionClasses>
<dependencies>
<dependency path="laboratory.context" />
</dependencies>
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6 changes: 3 additions & 3 deletions PMR/resources/views/pmrAdmin.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="PMR Site Admin">
<permissions>
<permission name="admin"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ehr.context" />
</dependencies>
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6 changes: 3 additions & 3 deletions PMR/resources/views/pmrAnimalHistory.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="PMR Animal History">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ehr.context" />
<dependency path="onprc_ehr/panel/MultiAnimalFilterType.js"/>
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6 changes: 3 additions & 3 deletions PMR/resources/views/pmrOverview.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="PMR Overview">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ehr.context" />
</dependencies>
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6 changes: 3 additions & 3 deletions PMR/resources/views/pmrSearch.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="PMR Animal Search">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ehr.context" />
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/about.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Citing mGAP">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/admin.view.xml
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<view xmlns="http://labkey.org/data/xml/view">
<permissions>
<permission name="admin"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/annotation.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Variant Annotation Strategy">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/data.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Sequence Data">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/dataProcessing.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Data Processing / Variant Calling Strategy">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/demographics.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="mGAP Cohort Demographics">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/externalData.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="mGAP Datasets and Cohorts">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/geneSearch.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Gene Search">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="gen/jbrowse2SearchWebpart.lib.xml"/>
<dependency path="LDK.context"/>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/helpMenu.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Help">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>

</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/overview.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="The Macaque Genotype and Phenotype Resource (mGAP)">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
<dependency path="internal/jQuery"/>
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7 changes: 3 additions & 4 deletions mGAP/resources/views/phenotypeList.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Diseases/Phenotypes Implicated By Variant Data">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
<dependency path="internal/jQuery"/>

</dependencies>
</view>
6 changes: 3 additions & 3 deletions mGAP/resources/views/phenotypes.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Macaque Phenotypes and Disease Models">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
<dependency path="internal/jQuery"/>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/quickLinks.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Quick Links">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/releaseNotes.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="mGAP Release Notes">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/tutorials.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="mGAP Tutorials">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
<dependency path="internal/jQuery"/>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/variantList.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Predicted Damaging Variants">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
<dependency path="laboratory.context"/>
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6 changes: 3 additions & 3 deletions mGAP/resources/views/variants.view.xml
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<view xmlns="http://labkey.org/data/xml/view">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mcc/resources/views/dashboardWebpart.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="MCC Dashboard">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="gen/dashboardWebpart"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mcc/resources/views/geneticsPlotWebpart.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Marmoset Genetics">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="gen/geneticsPlotWebpart"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mcc/resources/views/helpMenu.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Help">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>

</dependencies>
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6 changes: 3 additions & 3 deletions mcc/resources/views/mccColonies.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="MCC Colonies">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mcc/resources/views/mccColony.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="MCC Colony">
<permissions>
<permission name="read"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.ReadPermission"/>
</permissionClasses>
<dependencies>
<dependency path="ldk.context"/>
</dependencies>
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6 changes: 3 additions & 3 deletions mcc/resources/views/mccFolderInit.view.xml
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<view xmlns="http://labkey.org/data/xml/view" title="Initialize MCC Study Folder">
<permissions>
<permission name="admin"/>
</permissions>
<permissionClasses>
<permissionClass name="org.labkey.api.security.permissions.AdminPermission"/>
</permissionClasses>
<dependencies>
<dependency path="mcc.context" />
</dependencies>
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11 changes: 5 additions & 6 deletions mcc/src/client/entryPoints.js
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Expand Up @@ -2,34 +2,33 @@ module.exports = {
apps: [{
name: 'dashboard',
title: 'MCC Data',
permission: 'read',
permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
path: './src/client/Dashboard'
},{
name: 'dashboardWebpart',
title: 'MCC Data',
permission: 'read',
path: './src/client/Dashboard/webpart',
generateLib: true
},{
name: 'animalRequest',
title: 'Animal Requests',
permission: 'read',
permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
path: './src/client/AnimalRequest'
}, {
name: 'requestReview',
title: 'Animal Request Review',
permission: 'read',
permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
template: 'home',
path: './src/client/RequestReview'
},{
name: 'geneticsPlot',
title: 'Marmoset Genetics',
permission: 'read',
permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
path: './src/client/GeneticsPlot'
},{
name: 'geneticsPlotWebpart',
title: 'Marmoset Genetics',
permission: 'read',
permissionClasses: ['org.labkey.api.security.permissions.ReadPermission'],
path: './src/client/GeneticsPlot/webpart'
}]
};