Merge 24.7 to develop#315

Merged

bbimber merged 22 commits intodevelopfrom

fb_merge_24.7_to_develop

Sep 25, 2024

Commits on Aug 28, 2024

Commits on Aug 30, 2024

Commits on Sep 3, 2024

Commits on Sep 4, 2024

Support native-pair-hmm-threads for HaplotypeCaller
bbimber
committed

Commits on Sep 6, 2024

Increase logging
bbimber
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Commits on Sep 7, 2024

Update samtools version
bbimber
committed

Commits on Sep 8, 2024

Commits on Sep 9, 2024

Commits on Sep 10, 2024

Skip cellranger-specific complete steps
bbimber
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Commits on Sep 13, 2024

UpdateSeuratPrototype now updates DB record
bbimber
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Commits on Sep 17, 2024

Add param to force re-processing of cell hashing
bbimber
committed

Commits on Sep 19, 2024

Switch RIRA project location
bbimber
committed

Commits on Sep 24, 2024