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Fix 60-layer initial state for EC60to30wISC #502

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Merged
mark-petersen merged 1 commit into from
Apr 2, 2020
Merged

Fix 60-layer initial state for EC60to30wISC #502

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1 change: 0 additions & 1 deletion ...and_setup/compass/ocean/global_ocean/EC60to30wISC/init/config_initial_state_60_layers.xml
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60 changes: 60 additions & 0 deletions ...and_setup/compass/ocean/global_ocean/EC60to30wISC/init/config_initial_state_60_layers.xml
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Original file line number Diff line number Diff line change
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<?xml version="1.0"?>
<config case="initial_state">
<get_file dest_path="initial_condition_database" file_name="PotentialTemperature.01.filled.60levels.PHC.151106.nc">
<mirror protocol="wget" url="https://web.lcrc.anl.gov/public/e3sm/mpas_standalonedata/mpas-ocean/initial_condition_database/"/>
</get_file>

<get_file dest_path="initial_condition_database" file_name="Salinity.01.filled.60levels.PHC.151106.nc">
<mirror protocol="wget" url="https://web.lcrc.anl.gov/public/e3sm/mpas_standalonedata/mpas-ocean/initial_condition_database/"/>
</get_file>

<get_file dest_path="initial_condition_database" file_name="windStress.ncep_1958-2000avg.interp3600x2431.151106.nc">
<mirror protocol="wget" url="https://web.lcrc.anl.gov/public/e3sm/mpas_standalonedata/mpas-ocean/initial_condition_database/"/>
</get_file>

<get_file dest_path="bathymetry_database" file_name="BedMachineAntarctica_and_GEBCO_2019_0.05_degree.200128.nc">
<mirror protocol="wget" url="https://web.lcrc.anl.gov/public/e3sm/mpas_standalonedata/mpas-ocean/bathymetry_database/"/>
</get_file>

<get_file dest_path="initial_condition_database" file_name="chlorophyllA_monthly_averages_1deg.151201.nc">
<mirror protocol="wget" url="https://web.lcrc.anl.gov/public/e3sm/mpas_standalonedata/mpas-ocean/initial_condition_database/"/>
</get_file>


<add_link source="../culled_mesh/culled_mesh.nc" dest="mesh.nc"/>
<add_link source="../culled_mesh/culled_graph.info" dest="graph.info"/>
<add_link source="../culled_mesh/critical_passages_mask_final.nc" dest="critical_passages.nc"/>
<add_link source="../culled_mesh/land_ice_mask.nc" dest="land_ice_mask.nc"/>
<add_link source_path="initial_condition_database" source="Salinity.01.filled.60levels.PHC.151106.nc" dest="layer_depth.nc"/>
<add_link source_path="initial_condition_database" source="PotentialTemperature.01.filled.60levels.PHC.151106.nc" dest="temperature.nc"/>
<add_link source_path="initial_condition_database" source="Salinity.01.filled.60levels.PHC.151106.nc" dest="salinity.nc"/>
<add_link source_path="initial_condition_database" source="windStress.ncep_1958-2000avg.interp3600x2431.151106.nc" dest="wind_stress.nc"/>
<add_link source_path="bathymetry_database" source="BedMachineAntarctica_and_GEBCO_2019_0.05_degree.200128.nc" dest="topography.nc"/>
<add_link source_path="initial_condition_database" source="chlorophyllA_monthly_averages_1deg.151201.nc" dest="swData.nc"/>

<namelist name="namelist.ocean" mode="init">
<template file="template_initial_state.xml" path_base="script_configuration_dir"/>
<template file="template_critical_passages.xml" path_base="script_core_dir" path="global_ocean"/>
<template file="template_init_with_land_ice.xml" path_base="script_configuration_dir"/>
<option name="config_iterative_init_variable">'landIcePressure_from_top_density'</option>
<option name="config_global_ocean_depth_file">'layer_depth.nc'</option>
<option name="config_global_ocean_minimum_depth">10</option>
<option name="config_global_ocean_deepen_critical_passages">.false.</option>
<option name="config_global_ocean_depth_conversion_factor">0.01</option>
<option name="config_global_ocean_tracer_depth_conversion_factor">0.01</option>
</namelist>

<streams name="streams.ocean" keep="immutable" mode="init">
<template file="template_initial_state.xml" path_base="script_configuration_dir"/>
<template file="template_critical_passages.xml" path_base="script_core_dir" path="global_ocean"/>
<template file="template_init_with_land_ice.xml" path_base="script_configuration_dir"/>
</streams>

<run_script name="run.py">
<step executable="gpmetis">
<argument flag="graph.info">4</argument>
</step>
<model_run procs="4" threads="1" namelist="namelist.ocean" streams="streams.ocean"/>
</run_script>

</config>