Feature build scripts

service/deployment/docker-compose.yml

@@ -6,15 +6,15 @@ services:
     expose:
         - "6379"
   scidash-postgres:
-    image: scidash_db
+    image: metacell/scidash_db:latest
     expose:
         - "5432"
     volumes:
         - ./database:/var/lib/postgresql/
   scidash:
-    image: scidash_image_dario
-    ports:
-        - 8001:8000
+    image: metacell/scidash:latest
+    expose:
+        - "8000"
     depends_on:
         - scidash-redis
         - scidash-postgres

service/deployment/haproxy/Dockerfile

@@ -0,0 +1,16 @@
+# Dockerfile
+
+# Use the offical haproxy base image
+FROM haproxy:1.7
+
+# Copy our haproxy configuration into the docker container
+COPY ./haproxy.cfg /usr/local/etc/haproxy/haproxy.cfg
+
+# Copy our ssl certificate into the docker container
+COPY ./spike.asu.edu.pem /private/spike.asu.edu.pem
+
+# HAProxy requires a user & group named haproxy in order to run
+RUN groupadd haproxy && useradd -g haproxy haproxy
+
+# HAProxy also requires /var/lib/haproxy/run/haproxy/ to be created before it's run
+RUN mkdir -p /var/lib/haproxy/run/haproxy/

service/deployment/haproxy/README

@@ -0,0 +1,19 @@
+INSTRUCTIONS:
+
+1. Edit the haproxy.cfg, in the section pasted below:
+
+backend www-backend
+    # Tell haproxy to redirect all http traffic to https
+    redirect scheme https if !{ ssl_fc }
+    server www-1 172.20.0.4:8000 check
+
+Change the ip address in the last line to match the one used by docker container that runs Scidash.
+Rebuild the haproxy docker image.
+
+=======================================
+
+2. Run the image as per below
+
+docker run --net=host -it haproxy:latest
+
+(if the image has been built as haproxy:latest, differently change that part to point to the relevant image just built).

service/deployment/haproxy/haproxy.cfg

@@ -0,0 +1,51 @@
+#haproxy.cfg
+
+global
+    chroot /var/lib/haproxy
+    user haproxy
+    group haproxy
+    pidfile /var/run/haproxy.pid
+
+    # Default SSL material locations
+    ca-base /usr/local/etc/ssl/certs
+    crt-base /usr/local/etc/ssl/private
+
+    # Default ciphers to use on SSL-enabled listening sockets.
+    ssl-default-bind-options   no-sslv3 no-tls-tickets force-tlsv12
+    ssl-default-bind-ciphers   ECDH+AESGCM:DH+AESGCM:ECDH+AES256:DH+AES256:ECDH+AES128:DH+AES:ECDH+3DES:DH+3DES:RSA+AESGCM:RSA+AES:RSA+3DES:!aNULL:!MD5:!DSS
+
+    spread-checks 4
+    tune.maxrewrite 1024
+    tune.ssl.default-dh-param 2048
+
+defaults
+    mode    http
+    balance roundrobin
+
+    option  dontlognull
+    option  dontlog-normal
+    option  redispatch
+
+    maxconn 5000
+    timeout connect 5s
+    timeout client  20s
+    timeout server  20s
+    timeout queue   30s
+    timeout http-request 5s
+    timeout http-keep-alive 15s
+
+frontend www-http
+    bind 0.0.0.0:80
+    reqadd X-Forwarded-Proto:\ http
+    default_backend www-backend
+
+frontend www-https
+    #Replace this with the name of your ssl certificate
+    bind 0.0.0.0:8002 ssl crt /private/spike.asu.edu.pem 
+    reqadd X-Forwarded-Proto:\ https
+    default_backend www-backend
+
+backend www-backend
+    # Tell haproxy to redirect all http traffic to https
+    redirect scheme https if !{ ssl_fc }
+    server www-1 172.20.0.4:8000 check

service/deployment/haproxy/spike.asu.edu.cert

@@ -0,0 +1,32 @@
+-----BEGIN CERTIFICATE-----
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+-----END CERTIFICATE-----

service/deployment/haproxy/spike.asu.edu.key

@@ -0,0 +1,52 @@
+-----BEGIN PRIVATE KEY-----
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service/deployment/haproxy/spike.asu.edu.pem

@@ -0,0 +1,84 @@
+-----BEGIN CERTIFICATE-----
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+-----END CERTIFICATE-----
+-----BEGIN PRIVATE KEY-----
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+-----END PRIVATE KEY-----

service/docker/build_all.sh

@@ -0,0 +1,5 @@
+#!/bin/bash
+
+./build_database.sh
+./build_virgo.sh
+./build_scidash.sh

service/docker/build_codefresh.sh

@@ -0,0 +1,5 @@
+#!/bin/bash
+
+docker build -f Dockerfile-virgo -t metacell/scidash_virgo:latest
+docker build -f Dockerfile-postgres -t metacell/scidash_db:latest
+docker build -f Dockerfile-scidash -t metacell/scidash:latest

service/docker/build_database.sh

@@ -0,0 +1,17 @@
+#!/bin/bash
+echo "We are going to build the scidash Database, be carefull since"
+echo " this can overwrite the existing container if another one is already running" 
+while true; do
+    read -p "Do you wish to install to continue?" yn
+    case $yn in
+        [Yy]* ) read -p "Please type the tag you want to use for this build (default will use the latest and overwrite this)" tag;
+		if [[ -z "$tag" ]]; then
+		   docker build -f Dockerfile-postgres -t metacell/scidash_db:latest
+		else
+		   docker build -f Dockerfile-postgres -t metacell/scidash_db:$tag
+		fi
+                break;;
+        [Nn]* ) exit;;
+        * ) echo "Please answer yes or no.";;
+    esac
+done

service/docker/build_scidash.sh

@@ -0,0 +1,17 @@
+#!/bin/bash
+echo "We are going to build the scidash image, be carefull since this"
+echo "can overwrite the existing image if another one is already running" 
+while true; do
+    read -p "Do you wish to install to continue?" yn
+    case $yn in
+        [Yy]* ) read -p "Please type the tag you want to use for this build (default will use the latest and overwrite this)" tag;
+		if [[ -z "$tag" ]]; then
+		   docker build -f Dockerfile-scidash -t metacell/scidash:latest
+		else
+		   docker build -f Dockerfile-scidash -t metacell/scidash:$tag
+		fi
+                break;;
+        [Nn]* ) exit;;
+        * ) echo "Please answer yes or no.";;
+    esac
+done

service/docker/build_virgo.sh

@@ -0,0 +1,17 @@
+#!/bin/bash
+echo "We are going to build the Geppetto\'s Virgo, be carefull since this"
+echo "can overwrite the existing image if another one is already built" 
+while true; do
+    read -p "Do you wish to install to continue?" yn
+    case $yn in
+        [Yy]* ) read -p "Please type the tag you want to use for this build (default will use the latest and overwrite this)" tag;
+		if [[ -z "$tag" ]]; then
+		   docker build -f Dockerfile-virgo -t metacell/scidash_geppetto:latest
+		else
+		   docker build -f Dockerfile-virgo -t metacell/scidash_geppetto:$tag
+		fi
+                break;;
+        [Nn]* ) exit;;
+        * ) echo "Please answer yes or no.";;
+    esac
+done