Estimating processing time and adding more sequences later

[chaetognatha]

Hi!

I wonder if there is a way to estimate the computation time necessary on a set?

Also, is it possible to run subsets and then add more later, or does the script need to rerun completely every time samples are added?

Best,
Mattis Knulst

[MigleSur]

Dear Mattis,

The idea of estimating the computation time needed for the set is brilliant! I will see if there is an easy way to implement it.

Unfortunately, it is impossible to add more samples later as then the generated pan-genome would have to change and essentially it would be just rerunning the tool on a new dataset.

I hope this answers your questions.

Best,
Migle