Retinal Cells Model

Split multi-soma .SWC files into separate files for each soma, and convert them to .OBJ format. Runs in linear time for large datasets.

Usage

Split somas in file named 'retinal_cells.swc' which are outputted to separate files in '/retinal_cells'
Convert to .OBJ format using conv_to_obj_robbie1977.py -- retrieved from https://github.com/Robbie1977/NRRDtools/blob/master/swc_to_obj.py

↓

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
__pycache__		__pycache__
retinal_cells		retinal_cells
retinal_cells_meshified		retinal_cells_meshified
retinal_cells_obj		retinal_cells_obj
README.md		README.md
conv_to_obj_robbie1977.py		conv_to_obj_robbie1977.py
conv_to_obj_robbie1977v02.py		conv_to_obj_robbie1977v02.py
convert_SWC_to_OBJ_line.py		convert_SWC_to_OBJ_line.py
convert_SWC_to_OBJ_navis.py		convert_SWC_to_OBJ_navis.py
format.png		format.png
output_navis.obj		output_navis.obj
requirements.txt		requirements.txt
retinal_cells.swc		retinal_cells.swc
retinal_test_cell.swc		retinal_test_cell.swc
split_cells.py		split_cells.py
testoutput.obj		testoutput.obj