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Allows the standalone BMI run to accept a configuration file arg from the command line.

After building with make you can execute ./run_bmi as before, and it will still look for the hard coded ./data/topmodel.run file.

You can also run ./run_bmi path/to/data/topmodel.run and it will use the provided configuration file instead.

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Configuration file location name is hardcoded instead of being a user input in stand alone mode

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