Added ci parameter to chi_calc()

.Rbuildignore

@@ -2,3 +2,4 @@
 ^\.Rproj\.user$
 ^ronNotes\.qmd$
 ^LICENSE\.md$
+^quarto_docs$

DESCRIPTION

@@ -5,15 +5,14 @@ Version: 0.0.1
 Authors@R: person(
   "Ronald","Buie", 
   email = "rbuie@kingcounty.gov", 
-  role = c("auth", "cre"))
-Description: This package is for use by epidemiologists within Public Health Seattle
-    and King County, and aligns to analytics guidelines and practices for Community
+  role = c("aut", "cre"))
+Description: This package provides tools for epidemiologists within Public Health Seattle
+    and King County. It aligns with analytics guidelines and practices for Community
     Health Indicators (CHI) as reported by the Assessment, Policy Development, and
-    Evaluation Unit. The major activities assisted by this packages are 
-    Simplifying the execution of identical CHI analyses across multiple variables
-    Creating CHI Tableau ready output of the analysis
-    Performing quality assurance regarding data structure and formatting
-    Pushing and pulling data to APDE servers
+    Evaluation Unit. The package simplifies the execution of identical CHI analyses 
+    across multiple variables, creates CHI Tableau-ready output of the analysis, 
+    performs quality assurance regarding data structure and formatting, and 
+    facilitates pushing and pulling data to APDE servers.
 URL: https://github.com/PHSKC-APDE/apde.chi.tools
 BugReports: https://github.com/PHSKC-APDE/apde.chi.tools/issues
 License: MIT + file LICENSE
@@ -23,28 +22,29 @@ Imports:
     data.table (>= 1.14.2),
     DBI (>= 1.1.0),
     dtsurvey (>= 0.0.2.0),
+    future, 
+    future.apply,
     glue (>= 1.6.1),
-    keyring (>= 1.2.0),
-    lubridate (>= 1.6.0),
-    methods,
     odbc (>= 1.2.2),
-    rads.data (>= 1.0.7.5),
+    progressr,
+    rads, 
+    rads.data,
     stats,
-    utf8 (>= 1.1.4),
-    yaml (>= 2.2.1),
-    utils
+    tidyr,
+    yaml (>= 2.2.1)
 Remotes:
-    github::PHSKC-APDE/rads.data, github::PHSKC-APDE/dtsurvey, github::PHSKC-APDE/apde.chi.tools
+    github::PHSKC-APDE/rads, github::PHSKC-APDE/dtsurvey
 Suggests: 
     httr,
     knitr,
+    progress,
     rmarkdown,
     markdown,
+    quarto,
     testthat (>= 3.0.0),
     srvyr,
     survey (>= 4.0)
-VignetteBuilder: knitr
 Depends: 
-    R (>= 3.1)
+    R (>= 4.1)
 Config/testthat/edition: 3
-RoxygenNote: 7.3.1
+RoxygenNote: 7.3.2

NAMESPACE

@@ -1,27 +1,63 @@
 # Generated by roxygen2: do not edit by hand
 
+export(chi_calc)
+export(chi_compare_estimates)
+export(chi_count_by_age)
+export(chi_drop_illogical_ages)
+export(chi_generate_analysis_set)
+export(chi_generate_instructions_pop)
 export(chi_generate_metadata)
 export(chi_generate_tro_shell)
+export(chi_get_cols)
+export(chi_get_yaml)
 export(chi_qa_tro)
 export(chi_sql_update)
-import(data.table)
 import(dtsurvey)
 import(future)
 import(future.apply)
+import(progressr)
+importFrom(DBI,Id)
+importFrom(DBI,dbConnect)
+importFrom(DBI,dbDisconnect)
+importFrom(DBI,dbExistsTable)
+importFrom(DBI,dbGetQuery)
+importFrom(DBI,dbWriteTable)
 importFrom(data.table,"%between%")
-importFrom(data.table,':=')
+importFrom(data.table,":=")
+importFrom(data.table,.GRP)
+importFrom(data.table,.SD)
+importFrom(data.table,`:=`)
+importFrom(data.table,between)
 importFrom(data.table,copy)
 importFrom(data.table,data.table)
-importFrom(data.table,dcast)
-importFrom(data.table,fread)
+importFrom(data.table,fcase)
+importFrom(data.table,fifelse)
+importFrom(data.table,fsetdiff)
 importFrom(data.table,is.data.table)
-importFrom(data.table,setDF)
+importFrom(data.table,rbindlist)
+importFrom(data.table,set)
 importFrom(data.table,setDT)
 importFrom(data.table,setcolorder)
 importFrom(data.table,setnames)
 importFrom(data.table,setorder)
-importFrom(data.table,shift)
+importFrom(data.table,setorderv)
+importFrom(data.table,tstrsplit)
+importFrom(data.table,uniqueN)
+importFrom(future.apply,future_lapply)
 importFrom(glue,glue)
-importFrom(rads,chi_qa)
-importFrom(utils,write.table)
+importFrom(glue,glue_sql)
+importFrom(odbc,odbc)
+importFrom(rads,calc)
+importFrom(rads,chi_cols)
+importFrom(rads,compare_estimate)
+importFrom(rads,round2)
+importFrom(rads,string_clean)
+importFrom(rads,substrRight)
+importFrom(rads,suppress)
+importFrom(rads,tsql_validate_field_types)
+importFrom(stats,na.omit)
+importFrom(tidyr,crossing)
+importFrom(tools,toTitleCase)
+importFrom(utils,tail)
+importFrom(yaml,read_yaml)
 importFrom(yaml,yaml.load)