Delayed start and output tutorials for v4#2357
Delayed start and output tutorials for v4#2357reint-fischer merged 19 commits intoParcels-code:v4-devfrom
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Merge remote-tracking branch 'origin/output-time-test' into delayed-start
…nd change int64 FILL_VALUE to np.iinfo(np.int64).min to fix Parcels-code#2180
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Notebook looks good! Just one minor suggestions to use actual dates in the animations?
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Fixed, including a few remaining time output edits since decode_times was fixed
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Also a very nice notebooks! Some suggestions:
- "The user is ..." is a bit formal language. Change that to "Users are". More fundamentally, we could discuss whether to use second-person ("you") throughout the tutorials? What do other tutorials/documentation use?
- Make clear that adding the custom metadata needs to be done before the pset.execute()?
- A small type in "Note when when ..."
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Thanks for catching this, I had left it from the v3 version. I like omitting “user”, many packages seem to be using “we”, which we also do a lot already. I like it as an inclusive way of writing, as we the writers are also users explaining Parcels to ourselves and each other.
Some other packages use the second-person (“we guide you how to ...”), which I think also reads nicely, but has a bit more of a top-down tone.
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I think I like the "we" form, especially if other packages use it too. Would be good to keep that as a consistent style throughout our tutorials. Perhaps we should/could also create a short styleguide for our tutorials?
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Oh really? I didn't realise that. Then no need to mention it here
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nvm my comment about pset.execute()..
I was also considering a short styleguide for the tutorials, we can add it under the maintainer documentation section of development?
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Should this tutorial be in examples (instead of examples_v3?
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no, I have not been able to implement adding particles to the particleset during the execution, so this is just a placeholder for now
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In the last cell, I'm getting an error
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
Cell In[16], [line 132](vscode-notebook-cell:?execution_count=16&line=132)
128 scatter.set_offsets(np.empty((0, 2)))
131 # Create animation
--> [132](vscode-notebook-cell:?execution_count=16&line=132) anim = matplotlib.animation.FuncAnimation(fig, animate, frames=nframes, interval=100)
133 anim
File ~/Codes/ParcelsCode/.pixi/envs/test-latest/lib/python3.11/site-packages/matplotlib/_api/__init__.py:218, in caching_module_getattr.<locals>.__getattr__(name)
216 if name in props:
217 return props[name].__get__(instance)
--> [218](https://file+.vscode-resource.vscode-cdn.net/Users/erik/Codes/ParcelsCode/docs/examples/~/Codes/ParcelsCode/.pixi/envs/test-latest/lib/python3.11/site-packages/matplotlib/_api/__init__.py:218) raise AttributeError(
219 f"module {cls.__module__!r} has no attribute {name!r}")
AttributeError: module 'matplotlib' has no attribute 'animation'
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The unit tests on mac are taking forever, is this common? |
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Yes, we've seen this before. I think @VeckoTheGecko is working on a fix. But in the meantime, you don't need to wait for CI success on macOS; you can merge as soon as you have green ticks on the ubuntu platforms |
Have we seen this before? I don't think there is a fix to this - its just the availability of Mac runners from github. If this becomes persistent then I can ask around if others are encountering the same |
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I have added the delayed start and output tutorials, which was made possible by fixes in #2333